LOCUS       XM_008770253            1841 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dopa decarboxylase (Ddc), transcript
            variant X1, mRNA.
ACCESSION   XM_008770253
VERSION     XM_008770253.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008770253.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008770253.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1841
                     /gene="Ddc"
                     /gene_synonym="AADC"
                     /note="dopa decarboxylase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 27
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 4 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:24311"
                     /db_xref="RGD:2494"
     CDS             82..1404
                     /gene="Ddc"
                     /gene_synonym="AADC"
                     /codon_start=1
                     /product="aromatic-L-amino-acid decarboxylase isoform X1"
                     /protein_id="XP_008768475.2"
                     /db_xref="GeneID:24311"
                     /db_xref="RGD:2494"
                     /translation="MDSREFRRRGKEMVDYIADYLDGIEGRPVYPDVEPGYLRALIPT
                     TAPQEPETYEDIIRDIEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIG
                     FSWGSASEATLVALLAARTKMIRQLQAASPELTQAALMEKLVAYTSDQAHSSVERAGL
                     IGGVKIKAIPSDGNYSMRAAALREALERDKAAGLIPFFVVVTLGTTSCCSFDNLLEVG
                     PICNQEGVWLHIDAAYAGSAFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSAMWV
                     KKRTDLTEAFNMDPVYLRHSHQDSGLITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGL
                     QAYIRKHVKLSHEFESLVRQDPRFEICTEVILGLVCFRLKGSNQLNETLLQRINSAKK
                     IHLVPCRLRDKFVLRFAVCSRTVESAHVQLAWEHIRDLASSVLRAEKE"
ORIGIN      
        1 aatgcatcag ttccaagctg tagtttgcag agctggactg agtggacctg tgaagaatcc
       61 aaattccaaa caattttcaa catggattcc cgtgaattcc ggagaagagg gaaggagatg
      121 gtggattata tagctgacta tctggacggc attgagggac gtccagtgta ccctgacgtg
      181 gagcctggct accttcgggc cctgatcccc accactgccc cccaggagcc agaaacatat
      241 gaggacataa tcagagacat tgaaaagata atcatgccag gggtcacaca ctggcacagc
      301 ccctacttct tcgcttactt ccccacggcc agctcctacc cagctatgct tgcggacatg
      361 ctgtgcgggg ctatcggctg cattggcttc tcctggggaa gtgccagcga agccaccttg
      421 gtggccctac tggctgctcg gactaaaatg atccgccagc tgcaggcagc ctccccagag
      481 ctgacacaag ctgctctcat ggaaaagctt gtcgcttaca catctgatca ggcacattcc
      541 tccgtagaaa gagctggatt aattggtgga gtcaaaataa aagcaattcc ttcagatggc
      601 aactactcca tgagagctgc tgcccttcgg gaggccctgg agagagacaa ggcggctggc
      661 ctgattcctt tcttcgtggt tgtcacccta ggaaccacat cttgctgctc ttttgacaat
      721 ctcctagaag tgggtcccat ctgcaaccag gagggtgtat ggctgcacat tgatgctgca
      781 tacgcaggca gtgcctttat ctgtcctgag ttccggtatc ttctgaatgg cgtggagttt
      841 gcagattcct ttaactttaa tccccacaag tggcttttgg tgaattttga ctgctctgcc
      901 atgtgggtga agaagagaac tgacctaacc gaagccttta atatggaccc tgtttatctg
      961 aggcacagtc accaggactc aggactcatc actgactaca ggcactggca aatcccactg
     1021 gggcgaagat ttcgctccct gaaaatgtgg tttgttttta gaatgtacgg agtcaagggg
     1081 ctgcaggctt acattcgaaa gcacgtgaag ctgtctcatg agtttgagtc cctggtacgc
     1141 caggaccctc gctttgaaat ttgcacggaa gtcatcctcg ggttggtctg cttccggcta
     1201 aagggctcca accagttgaa cgaaactctc ttacaaagaa taaacagcgc caaaaaaatc
     1261 cacttggttc cgtgtcgtct ccgagacaag tttgtgctgc gctttgcggt gtgctcccgc
     1321 actgtggagt ctgcccacgt gcagctggcc tgggagcaca tccgagatct agcgagcagt
     1381 gtgctgaggg cagagaaaga gtaaaagcag agccgcttca gagacccaaa gttgaaaaaa
     1441 agtttttccg aaaactggga agagaaaaat aaccacccct ccgtcttcgt gaaatcatgc
     1501 ttgtatgtgg cgtcatgtgt gtctccaaaa ttaaccagaa actgctgatt gacttttcag
     1561 tgacttctca atgaagaaat actttctgca ttatccaggg aaagtattaa tctgtgtgga
     1621 aattaacacc agtggctcta gcttctgttc tttgtgtggc cgtgattttt gttgataata
     1681 agatgtctca gtgttcataa agccgtaggt ggtagaaaag gcttatagaa atattttcta
     1741 gggtggtttt tggtctttct tgccttcaga tgatatctct ggctgttaac ttgtcctctg
     1801 tgtggctaaa tacttaataa acaacccgtg tgcaatacta a
//
