LOCUS       NM_001009696            1230 bp    mRNA    linear   ROD 31-MAY-2024
DEFINITION  Rattus norvegicus defective in cullin neddylation 1 domain
            containing 5 (Dcun1d5), mRNA.
ACCESSION   NM_001009696 XM_235807
VERSION     NM_001009696.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Thomas,Y., Scott,D.C., Kristariyanto,Y.A., Rinehart,J., Clark,K.,
            Cohen,P. and Kurz,T.
  TITLE     The NEDD8 E3 ligase DCNL5 is phosphorylated by IKK alpha during
            Toll-like receptor activation
  JOURNAL   PLoS One 13 (6), e0199197 (2018)
   PUBMED   29958295
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087627.1.
            
            On Jan 13, 2005 this sequence version replaced XM_235807.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087627.1, FQ215259.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q11"
     gene            1..1230
                     /gene="Dcun1d5"
                     /gene_synonym="RGD1307008"
                     /note="defective in cullin neddylation 1 domain containing
                     5"
                     /db_xref="GeneID:315405"
                     /db_xref="RGD:1307008"
     exon            1..326
                     /gene="Dcun1d5"
                     /gene_synonym="RGD1307008"
                     /inference="alignment:Splign:2.1.0"
     CDS             241..954
                     /gene="Dcun1d5"
                     /gene_synonym="RGD1307008"
                     /note="defective in cullin neddylation protein 1-like
                     protein 5; DCUN1 domain-containing protein 5; DCN1,
                     defective in cullin neddylation 1, domain containing 5;
                     squamous cell carcinoma-related oncogene 5"
                     /codon_start=1
                     /product="DCN1-like protein 5"
                     /protein_id="NP_001009696.1"
                     /db_xref="GeneID:315405"
                     /db_xref="RGD:1307008"
                     /translation="MPVKKKRKAPGVAAAVAEDAGLKKCKISSYCRSQPPARLISGEE
                     DFSRKKCLAWFYEYAGPDEVVGPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFT
                     KEEWLKGMTSLQCDCTEKLQSRFDFLRSQLNDISSFKNIYRYAFDFARDKDQRSLDID
                     TAKSMLALLLGRTWPLFSVFYQYLEQSKYRVMNKDQWYNVLEFSRTVHADLSNYDEDG
                     AWPVLLDEFVEWQKIRQTS"
     exon            327..418
                     /gene="Dcun1d5"
                     /gene_synonym="RGD1307008"
                     /inference="alignment:Splign:2.1.0"
     exon            419..489
                     /gene="Dcun1d5"
                     /gene_synonym="RGD1307008"
                     /inference="alignment:Splign:2.1.0"
     exon            490..581
                     /gene="Dcun1d5"
                     /gene_synonym="RGD1307008"
                     /inference="alignment:Splign:2.1.0"
     exon            582..690
                     /gene="Dcun1d5"
                     /gene_synonym="RGD1307008"
                     /inference="alignment:Splign:2.1.0"
     exon            691..795
                     /gene="Dcun1d5"
                     /gene_synonym="RGD1307008"
                     /inference="alignment:Splign:2.1.0"
     exon            796..898
                     /gene="Dcun1d5"
                     /gene_synonym="RGD1307008"
                     /inference="alignment:Splign:2.1.0"
     exon            899..1206
                     /gene="Dcun1d5"
                     /gene_synonym="RGD1307008"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgactactga aggtgccgcg ctgtcggcgt tcgcttcccc tggaaaagcc cgagccgcgt
       61 tatcgccggg cttagcgctg cgctgccccg aatcgcccct aaagaggaaa cccgaggcga
      121 ggtcgcgcct cggtcctccg ctgcggtccc tggcaggcgg gagccggcgc tgcggggcct
      181 gcggcggagc gcgatacccc tccccggccg ccctgtccac cttgccgggg aaggcggaag
      241 atgccagtga agaagaagag aaaagctccc ggagtggcag cggcggtcgc ggaagacgcg
      301 ggcctcaaaa agtgtaaaat ctccagctat tgcagatccc agcctcctgc tagactcatc
      361 agtggagagg aagatttttc aagaaagaag tgcctggctt ggttttatga gtatgcaggt
      421 cctgatgaag ttgtagggcc agaaggaatg gaaaagtttt gtgaagacat tggtgttgaa
      481 cctgaaaata ttattatgtt agttttagcg tggaaattgg aggctgaaag catgggattt
      541 tttaccaagg aagaatggtt aaagggaatg acttcattac agtgtgactg cacagaaaag
      601 ttacaaagca ggtttgactt cctgcgctca cagctgaacg acatctcgtc atttaagaac
      661 atctacagat acgcctttga ttttgcaagg gataaagatc agagaagcct tgatattgat
      721 actgctaagt ctatgctagc tctgctgctt gggaggacgt ggccactttt ttcagtattt
      781 taccagtacc tggagcaatc aaagtatcgt gttatgaaca aagatcagtg gtacaatgta
      841 ttagaattca gcagaacagt tcatgccgat cttagtaact acgatgaaga cggcgcttgg
      901 cctgttcttc ttgatgagtt tgttgagtgg caaaaaatcc gtcaaacatc atagcaagaa
      961 ctgttgtgaa gacaatgcaa accttgtgaa gaaaatgcaa agaggaggga gaatacacag
     1021 agtgcatttt cactcacgaa agacttctca tagtactttt tccttttttt taaaggaagt
     1081 tttcttgtta catgtgatgg gcattgagcc acatgtcttc tgagactgaa tattgacatt
     1141 tttgtttcaa gttatgtttt taacatttat ttcagaacaa taaagattca gatttgtgac
     1201 aaaggcaaaa aaaaaaaaaa aaaaaaaaaa
//
