LOCUS       NM_001134798            1421 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus defective in cullin neddylation 1 domain
            containing 2 (Dcun1d2), mRNA.
ACCESSION   NM_001134798 XM_001068808
VERSION     NM_001134798.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1421)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Sep 6, 2008 this sequence version replaced XM_001068808.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ224263.1, FQ088474.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-16                JAXUCZ010000016.1  82956617-82956632
            17-233              JAXUCZ010000016.1  82962881-82963097
            234-402             JAXUCZ010000016.1  82964814-82964982
            403-533             JAXUCZ010000016.1  82969899-82970029
            534-616             JAXUCZ010000016.1  82978001-82978083
            617-713             JAXUCZ010000016.1  82980286-82980382
            714-1421            JAXUCZ010000016.1  82981362-82982069
FEATURES             Location/Qualifiers
     source          1..1421
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..1421
                     /gene="Dcun1d2"
                     /gene_synonym="RGD1311743"
                     /note="defective in cullin neddylation 1 domain containing
                     2"
                     /db_xref="GeneID:688913"
                     /db_xref="RGD:1582994"
     exon            1..16
                     /gene="Dcun1d2"
                     /gene_synonym="RGD1311743"
                     /inference="alignment:Splign:2.1.0"
     CDS             14..793
                     /gene="Dcun1d2"
                     /gene_synonym="RGD1311743"
                     /note="squamous cell carcinoma-related oncogene; DCN1,
                     defective in cullin neddylation 1, domain containing 2"
                     /codon_start=1
                     /product="DCN1-like protein 2"
                     /protein_id="NP_001128270.1"
                     /db_xref="GeneID:688913"
                     /db_xref="RGD:1582994"
                     /translation="MHKLKSAQKDKVRQFMACTQASEKTAIYCLTQNEWKLDEATDSF
                     FQNPEAFHRESMKSSVDQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISV
                     LVIAWRFRAATQCEFSKKEFVDGMTELGCDSTERLKALLPKLEQELKDSAKFKDFYQF
                     TFTFAKNPGQKGLDLEMAVAYWKLVLSGRFKFLDLWNTFLLEHHKRSIPRDTWNLLLD
                     FGNMIADDLSNYDEEGAWPVLIDDFVEYARPVVTGGRRGPL"
     exon            17..233
                     /gene="Dcun1d2"
                     /gene_synonym="RGD1311743"
                     /inference="alignment:Splign:2.1.0"
     exon            234..402
                     /gene="Dcun1d2"
                     /gene_synonym="RGD1311743"
                     /inference="alignment:Splign:2.1.0"
     exon            403..533
                     /gene="Dcun1d2"
                     /gene_synonym="RGD1311743"
                     /inference="alignment:Splign:2.1.0"
     exon            534..616
                     /gene="Dcun1d2"
                     /gene_synonym="RGD1311743"
                     /inference="alignment:Splign:2.1.0"
     exon            617..713
                     /gene="Dcun1d2"
                     /gene_synonym="RGD1311743"
                     /inference="alignment:Splign:2.1.0"
     exon            714..1421
                     /gene="Dcun1d2"
                     /gene_synonym="RGD1311743"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcattgggg agcatgcata aacttaaatc agctcagaag gacaaggtcc gccagttcat
       61 ggcatgcact caggctagtg agaagactgc catctactgc ctgacacaga atgagtggaa
      121 actagacgag gccacggaca gtttcttcca gaacccagag gcgttccacc gagagtctat
      181 gaagagcagt gtggaccaga agaagctgga gcagctctac agcaggtaca aagacccgca
      241 ggacgaaaac aagatcggaa tcgatgggat ccagcagttc tgcgatgacc tgagcctgga
      301 cccggccagt atcagtgttt tggtcatagc atggaggttc agggccgcca ctcagtgcga
      361 atttagcaag aaggaatttg tggacggcat gacagagctg gggtgtgata gcacagagag
      421 gctgaaagct cttctcccca aactggagca agagcttaag gactcagcta agttcaagga
      481 cttttaccag tttaccttca ccttcgccaa gaaccctggg cagaagggct tagatttaga
      541 aatggctgtt gcatattgga agttagtatt gtctggaagg tttaaatttt tagatctttg
      601 gaacacattt ctgctggagc atcacaaaag atcaattcca agggacactt ggaaccttct
      661 cctagatttt ggaaacatga ttgcagacga tttgtctaac tacgatgaag aaggagcatg
      721 gcctgtcctt atagatgact ttgtagaata tgcacggcca gtagtcacag gagggagacg
      781 tggccctctc tagacggaaa cgccagagac gccagacaga gggcatgtcc tggaggagac
      841 ggctgcgtgg gttgctgtgt gcatttgtcg ctgacctcag agtcttcctc atccattcat
      901 gaagcaaatc ctcactctgc ttaaaggctg cagtggctga cagcgcagac acgaagaagc
      961 tcctcggggc gtgagggaca ttggcaaagc tattgcttta ggagacgcct gcatgacttg
     1021 tctttataga gagcaacaca gaccctgttt gcagggctga aagcatgttg ttcagttgat
     1081 gacgttaagg tgagcaccag ccgtttccaa actggaatca tgttacagtt atgcttcaaa
     1141 gtagcatccg tgtccccaga atgatgtgtc ttttatacaa gcccaaacct cttgaagatg
     1201 gccttgtcag agagcccact gcttttaatc ttggtattca agatggatag ttttaaatca
     1261 tcaaatctct agatttacta gatgtcttgc tttcattttc tctagaagat accgttgcag
     1321 tttgcacggg gtgggggggc acaggacgca atccagcagg ttcatatcaa actgtttaca
     1381 agccggtagg cctggttcac ttctactgag gttactacta t
//
