LOCUS       NM_001013882            1902 bp    mRNA    linear   ROD 10-FEB-2025
DEFINITION  Rattus norvegicus dCMP deaminase (Dctd), transcript variant 1,
            mRNA.
ACCESSION   NM_001013882 XM_214348
VERSION     NM_001013882.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1902)
  AUTHORS   Wang,J., Huo,K., Ma,L., Tang,L., Li,D., Huang,X., Yuan,Y., Li,C.,
            Wang,W., Guan,W., Chen,H., Jin,C., Wei,J., Zhang,W., Yang,Y.,
            Liu,Q., Zhou,Y., Zhang,C., Wu,Z., Xu,W., Zhang,Y., Liu,T., Yu,D.,
            Zhang,Y., Chen,L., Zhu,D., Zhong,X., Kang,L., Gan,X., Yu,X., Ma,Q.,
            Yan,J., Zhou,L., Liu,Z., Zhu,Y., Zhou,T., He,F. and Yang,X.
  TITLE     Toward an understanding of the protein interaction network of the
            human liver
  JOURNAL   Mol Syst Biol 7, 536 (2011)
   PUBMED   21988832
  REMARK    Erratum:[Mol Syst Biol. 2017 Dec 18;13(12):965. doi:
            10.15252/msb.20178107.. PMID: 29254952]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1902)
  AUTHORS   Maley,G.F., Lobo,A.P. and Maley,F.
  TITLE     Properties of an affinity-column-purified human deoxycytidylate
            deaminase
  JOURNAL   Biochim Biophys Acta 1162 (1-2), 161-170 (1993)
   PUBMED   8448179
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            EV776012.1 and BC087138.1.
            
            On Jun 4, 2009 this sequence version replaced NM_001013882.1.
            
            Transcript Variant: This variant (1) represents the shorter
            transcript but encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087138.1, EV776012.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-45                EV776012.1         26-70
            46-1902             BC087138.1         1-1857
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q11"
     gene            1..1902
                     /gene="Dctd"
                     /note="dCMP deaminase"
                     /db_xref="GeneID:290741"
                     /db_xref="RGD:1359671"
     exon            1..70
                     /gene="Dctd"
                     /inference="alignment:Splign:2.1.0"
     exon            71..202
                     /gene="Dctd"
                     /inference="alignment:Splign:2.1.0"
     CDS             77..631
                     /gene="Dctd"
                     /EC_number="3.5.4.12"
                     /note="isoform 1 is encoded by transcript variant 1;
                     deoxycytidylate deaminase"
                     /codon_start=1
                     /product="deoxycytidylate deaminase isoform 1"
                     /protein_id="NP_001013904.2"
                     /db_xref="GeneID:290741"
                     /db_xref="RGD:1359671"
                     /translation="MTYTPNMSDISCKKRDDYLEWPEYFMAVAFLSAQRSKDPSSQVG
                     ACIVNTENKIVGIGYNGMPNGCSDDLLPWRRTAENKLDTKYPYVCHAELNAIMNKNSA
                     DVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSEETTAARLLFKLAGVTFRK
                     FTPKYSKIVIDFDSINSRPSQKPQ"
     exon            203..338
                     /gene="Dctd"
                     /inference="alignment:Splign:2.1.0"
     exon            339..455
                     /gene="Dctd"
                     /inference="alignment:Splign:2.1.0"
     exon            456..552
                     /gene="Dctd"
                     /inference="alignment:Splign:2.1.0"
     exon            553..1879
                     /gene="Dctd"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttcccgcgc gcgcggcggc tgtgtagggc ggaccgtctg agcgtggcct gcaccccagc
       61 ggagcggacg tggcatatga cttatacacc caacatgagt gacatttcct gcaaaaaacg
      121 ggatgactat ctggagtggc cggagtattt catggcggta gccttcttgt cagcacaaag
      181 aagcaaggac ccaagttccc aggtgggagc ctgcattgtg aatacagaaa acaagatcgt
      241 tgggatcggg tacaatggga tgccaaatgg gtgcagcgat gacctgttgc cctggaggag
      301 aacagcagaa aacaagctgg atactaaata cccttatgtg tgccacgccg agctgaacgc
      361 catcatgaac aagaattcgg ccgacgtgaa gggctgcagt atgtatgtgg ccttgttccc
      421 atgtaatgaa tgtgcgaagc tcatcattca ggcaggtata aaagaggtta ttttcatgtc
      481 ggataaatac catgacagcg aggagacgac ggctgctagg cttctgttta aattggctgg
      541 ggttacgttc agaaaattca caccaaagta cagcaagatt gtcattgatt tcgattcgat
      601 taatagccgt ccgagtcaga agcctcagtg agtttcgagc cccggaagaa gatgacaccc
      661 cacacacaag gggctccctg agcctttcct cttaagtcac gcataacttt ttaatagcac
      721 agcacacact aaagaatata aaactggggc tcttctctac cgtcacacgg atctacgtct
      781 gcctcagctg tcgatctagt ttgccttgga aactaaggga ccgcccacgg gagctggagg
      841 gaaggtctct ccacttccgc agagcctgtc tgcctgccga gagggaggct gcaccagcga
      901 gtgtcagctc tgtcatccac cgcattgcaa cagccactcc tcactgctac acgggctaga
      961 aggacataca agtaattgct tctggttcct agcagggatg agcagactgc tctgatgtga
     1021 acatctggcc caaatgaagc atgccctgtc acgcccttgg aaaaacaaac aggaccaaat
     1081 gaagctagct cacgtgagcg gacctgctgc tgcagaggcc tctcacctgt tcgcatgagg
     1141 ccgaggaggg ctgtggcccg gcaggtgatc aggacagtat cccctcggtt cgcactttcc
     1201 tgccccacac acaacagtag ctcactatcc ctctggaggg tagaggaccc ctgtggttcc
     1261 agcctcttat ccttggtttg ttggtcacat agcacagtta aatttatccg aggaataagt
     1321 agctcctaga ggagacagca tatcgctccc cccagaccag gcactgtgca gcgacagctg
     1381 cagctgtatg gatgggtgat gtgggatgtc ccccagcccg tttctcctgc tgtgtgggca
     1441 catgtcactc ctgttctcgt tccagcatgg ttcatttcca agggcaccct acaaccagag
     1501 agcacattaa ttcctgtcct ataaggggat tatgggagac actgtacctg gagttagtcc
     1561 acgccagacc cactggcgta ccctcacagg cagcatccgc ctggcgcccc agtgtggatg
     1621 ggggcgcccc actgtgtaat ctgtttttaa cttcatttaa cttcagcaaa catgctcggt
     1681 gtctttgata gtttcttttt cctaaaaatt gttccctttt gtagaatgct tgtcccccgc
     1741 ccatgttctc ccggcatggg tttttatttc gtctctaaga tttttatttg atttttttta
     1801 aaactattct ggagcagttt tataatttgg atctttgcca atattattaa aaatttatta
     1861 aaatccacca gtaccaaaaa aaaaaaaaaa aaaaaaaaaa aa
//
