LOCUS       XM_008770941            2189 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dopachrome tautomerase (Dct), mRNA.
ACCESSION   XM_008770941
VERSION     XM_008770941.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 17, 2024 this sequence was replaced by
            NM_001427268.1.
            
            On Jan 21, 2021 this sequence version replaced XM_008770941.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2189
                     /gene="Dct"
                     /note="dopachrome tautomerase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 25
                     ESTs, 8 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 11 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:290484"
                     /db_xref="RGD:1564975"
     CDS             424..1977
                     /gene="Dct"
                     /codon_start=1
                     /product="L-dopachrome tautomerase"
                     /protein_id="XP_008769163.2"
                     /db_xref="GeneID:290484"
                     /db_xref="RGD:1564975"
                     /translation="MGLVRWGLLLGCLGCGILLGARAQFPRVCMTLDGVLNKECCPPL
                     GPEANNICGFLDGRGQCTEVQTDTRPWSGPYVLRNQDDREQWPRKFFNRTCKCTGNFA
                     GYNCGGCKFGWTGPDCNQKKPPVLRQNIHSLTAQEREQFLSALDLAKKTIHPDYVITT
                     QHWLGLLGPNGTQPQIANCSVYDFFVWLHYYSVRDTLLGPGRPYKAIDFSHQGPAFVT
                     WHRYHLLWLERELQRLIGNESFALPYWNFATGKNECDVCTDELLGAARQDDPTLISQN
                     SRFSTWEIVCDSLDDYNRRVTLCNGTYEGLLRRNKVGRNNETLPTLKNVQDCLSLQEF
                     DSPPFFQNSTFSFRNALEGFDKADGTLDSQVMNLHNLAHSFLNGTNALPHSAANDPVF
                     VVLHSFTDAIFDEWLRKNNPSTDAWPQELAPIGHNRMYNMVPFFPPVTNEELFLTADQ
                     LGYNYAIDLSVEEAPVWTTTLSVVIGILGGFAGVLAFLAFLHYRRLRKGYAPLMETGL
                     SSKRYTEEA"
ORIGIN      
        1 taaggtcaag ggctacggag aggaggaggc ttagaaacag cagcataata agccgtacag
       61 ctggagcgct ctgtaaatta actcaattag acagagcccg atttaacaag gaagactggc
      121 gagaagcgcg cccctcatta aacttgatgt tagaggagct tctgatgaaa ttaaatttgt
      181 gttagttgtt tgagtcacat aaaatagcat gtgcgcgtac acatgtgcac acgtgtaggc
      241 tctgtgattt aggtgggaat tctgagaggg tgagaggaaa gggctagaac taaacagcga
      301 gagaaggaaa ggaaaggaga ttttgagtga gtgaaggccc cagaactcag gagtggaaga
      361 caaggagggt agccagacag aaaacaggtg ggaagccgag ccgggcctcc caattaagaa
      421 ggcatgggcc tcgtgcgatg ggggcttctg ctgggttgcc tgggctgcgg aattctgctc
      481 ggagctcggg ctcagtttcc ccgcgtctgc atgaccttgg atggcgtgct gaacaaagaa
      541 tgctgcccgc ccctgggccc cgaggcaaac aacatatgcg gctttctaga cggtcgcggc
      601 cagtgcaccg aggtgcagac agacaccagg ccctggagcg gcccttacgt ccttcgaaat
      661 caggatgacc gtgagcagtg gccaagaaaa ttcttcaacc ggacttgcaa atgcacagga
      721 aactttgctg gttataattg tggaggctgc aagtttggct ggaccggccc cgactgtaat
      781 cagaagaagc caccagtcct aaggcagaat atccattccc tgactgccca ggagagggag
      841 cagttcttga gcgccttaga cctagcgaag aagactatcc acccagacta cgtgatcacc
      901 acgcagcact ggctggggct gcttgggccc aacggaaccc agccccagat tgccaattgc
      961 agcgtgtatg acttttttgt gtggctccat tattattctg ttcgagacac attattaggt
     1021 ccaggacgcc cctataaggc cattgatttc tctcaccaag ggcctgcctt tgtcacatgg
     1081 cacaggtacc atttgttgtg gctggaaaga gagctccaga gactcattgg caacgagtcc
     1141 tttgctttgc cctattggaa ctttgccacc gggaagaatg agtgtgacgt gtgcacagat
     1201 gagctgctcg gagcagcgag acaagatgac ccgaccctga ttagtcagaa ctcaaggttc
     1261 tctacctggg agattgtgtg tgacagtttg gatgactaca accgccgggt taccctgtgt
     1321 aatggcacct acgaaggttt gctgagaaga aacaaagtag gcagaaataa cgagacattg
     1381 ccaaccttaa aaaatgtgca agactgcctg tccctccagg agtttgacag tcctcccttc
     1441 ttccagaact caaccttcag cttcaggaat gcgctggaag ggtttgacaa agcagacgga
     1501 acattggact ctcaggtcat gaaccttcat aacttggctc actccttcct gaatggaacg
     1561 aatgccttgc cacactcagc tgccaacgac cctgtctttg tggtcctcca ctctttcacg
     1621 gacgccatct ttgatgagtg gctgaggaaa aacaaccctt ccacagatgc ctggcctcag
     1681 gagctggcac ccattggtca caatcggatg tataacatgg tccccttctt cccaccagtg
     1741 accaatgagg agctcttctt aaccgcagac caacttggct acaattatgc cattgatctg
     1801 tcagtggaag aagctccagt ttggaccaca accctctcag tggtcattgg aatcctggga
     1861 ggttttgctg gagtcttggc gtttctggct ttccttcact acagaaggct tcgcaaaggc
     1921 tatgcaccct taatggagac aggcctaagc agcaagagat acacagagga ggcctaacag
     1981 gctctctcct gcttgaccta ggtagtcact aaatgcaccc tcactcttct tgggatcggt
     2041 gaaaatcttg agcgtgtgct ccttagcagt gatgctgatc ccccaacttt gcttattaca
     2101 cgcagacaaa atgcttgggt ctgtcaccgt catcaaagta aggtgtggct agtcctacgt
     2161 gacctttgat taaaagtcct tatactgat
//
