LOCUS       XM_008765472            2167 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dendrocyte expressed seven
            transmembrane protein (Dcstamp), transcript variant X1, mRNA.
ACCESSION   XM_008765472
VERSION     XM_008765472.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008765472.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008765472.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2167
                     /gene="Dcstamp"
                     /note="dendrocyte expressed seven transmembrane protein;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     22 samples with support for all annotated introns"
                     /db_xref="GeneID:103690326"
                     /db_xref="RGD:1310435"
     CDS             214..1626
                     /gene="Dcstamp"
                     /codon_start=1
                     /product="dendritic cell-specific transmembrane protein
                     isoform X1"
                     /protein_id="XP_008763694.1"
                     /db_xref="GeneID:103690326"
                     /db_xref="RGD:1310435"
                     /translation="MGLWALGTSVFLRLWGTYVFPGSTAWTNFIQHLGVCCFVALLSV
                     SLLSAALYWVLPSAALLSAVWMATCVFLCCSKHARCFILLAIVSCGLREGRNTLLAAG
                     TGVVIFGHVENIFSNFRGLLDSMTCNLRAKNFSTHFPLLKRYIEAIEWIYGLTTPLNV
                     LDDLVSWNQTLAVSLFSPSHALQAHMNDTRGEVLSVLHRMVLTTELLTSVGQKLLALA
                     GLLLILVSTGLFLKRFLGPCGWKYENVYITRQFVLFDEEERCQQRPCVLPLNRKERKK
                     YIIVPSLKLTPKERRNLGLFFLPVLTYLYMWMLFATVDYLLYRLISSVNKQFQSLPGL
                     EVHLRLHGEKQGTHGVIHDSAFNISMFEPSCILKPRLSVSQTWVPLSIILLTLVILGL
                     LSSMLMQLKILVSVSFYPKVERERIEYLHAKLLEKRSKQPLGEADRKLSLYFKKIHFW
                     LPVLKMTRKKHMIPANEDDP"
ORIGIN      
        1 ctcgggcttc cttcatacag tttctaccct tgatgacatt aaataactta gtcacattgt
       61 ggaggaaatg aagagagatt gattcagggt gatgtggtcc accttctcat gtctgcttcc
      121 cctttccctg acccatatta agcctcctga gcttccagaa gatcatattt tgtgcttgtg
      181 gaggaaccaa agaggaactt ggacacaggg agcatggggc tctgggcctt gggcaccagt
      241 gtattcctaa ggctttgggg gacttatgtg ttcccaggaa gcactgcctg gacaaacttc
      301 atccagcatt tgggagtttg ctgctttgtg gctctccttt cggtaagcct cctctctgca
      361 gccctctact gggtcttgcc atccgctgcc ttgctctctg ctgtctggat ggccacttgt
      421 gtctttctgt gctgttccaa gcatgcacgg tgcttcattc ttctggccat tgtctcgtgt
      481 ggcctccgtg aagggaggaa cactttgctt gcggctggca ctggggtagt gatctttgga
      541 cacgtggaaa atattttctc taacttcaga ggtctcttag acagcatgac ttgcaaccta
      601 agggcaaaga acttttcgac acattttcca cttttaaaac gctatatcga agccattgag
      661 tggatttacg gcctcaccac tccactgaat gtacttgatg accttgtttc atggaaccag
      721 actctggcgg tctctctttt tagtcccagc catgccctgc aggctcacat gaatgacacc
      781 agaggagaag tcctgagtgt cctgcatcgc atggtgctca cgacagagct tctgacttct
      841 gtgggccaga aactgcttgc cctcgccggg cttctgctca ttctagtcag cactggcctc
      901 ttcctgaagc gattcctggg cccttgtggc tggaagtacg agaatgtcta catcaccaga
      961 caatttgttc tgtttgatga agaggagagg tgccaacagc ggccctgtgt cctcccgctg
     1021 aataggaagg agaggaagaa atacatcatc gtcccatctt tgaagctgac tcccaaagag
     1081 aggagaaacc ttgggctttt tttcctccct gtcctgacct atctctacat gtggatgctg
     1141 ttcgcaactg tggattatct gctgtatcgg ctcatttcct ccgtgaacaa acagttccaa
     1201 agcttgccag ggctagaagt tcacttgaga ctacatggag agaaacaagg aactcacgga
     1261 gtcatccacg attctgcctt taatatatct atgttcgaac caagctgcat tcttaaacca
     1321 cggctcagtg tgtctcagac ttgggttcct cttagtatta ttctcttaac gctggtgata
     1381 ctaggattgt tgtcttctat gctgatgcag cttaaaattc tagtgtcagt ctccttctac
     1441 cccaaagtgg agagggagag aattgagtac ctccatgcaa agctccttga gaaacgatca
     1501 aagcagccat tgggagaagc tgataggaaa ctgagcctgt actttaaaaa gattcacttc
     1561 tggcttccag tcctgaaaat gactaggaag aagcatatga tccctgcaaa tgaagatgac
     1621 ccgtgagcaa catggtcctt cttccagggt cagtggctgc ttcttactgt ctattcagta
     1681 agagagggct ctatgagaag aaggtctaca gatgcttgag tttgcaagcc cacctttctg
     1741 gttattcttc aagctacttg tcaatcataa tgccaaatgg tccctaggta aatagatttt
     1801 tagtctgtct tccaaacaaa acacagtacc tagaatgtca tggttaaagc taaaatgatg
     1861 gttggcatga acatgtcctc tagaggctaa gatgtttgat aggtagatga tagatcccca
     1921 gttggtgcaa tttaggggag acttacgagg tgtggtcttg ctggataaag tgtgtcacca
     1981 gaaagtgttt tgcagtttta aaagccatgt gctaattcct gtttgctcta tttcctgcct
     2041 gtggctggag atgtgggttc tcagctgtcc ctgcctccag gtctgtctgt cagcatagtt
     2101 ccccactgag atggtcatgg ttcctctctg gaaccttaag tccaaataaa ccctttcttc
     2161 tacatgt
//
