LOCUS       XM_008761239            2293 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus DC-STAMP domain containing 2 (Dcst2),
            transcript variant X1, mRNA.
ACCESSION   XM_008761239
VERSION     XM_008761239.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008761239.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008761239.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2293
                     /gene="Dcst2"
                     /note="DC-STAMP domain containing 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, and 99% coverage of the annotated genomic feature by
                     RNAseq alignments, including 3 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:295247"
                     /db_xref="RGD:1564557"
     CDS             141..2273
                     /gene="Dcst2"
                     /codon_start=1
                     /product="DC-STAMP domain-containing protein 2 isoform X1"
                     /protein_id="XP_008759461.1"
                     /db_xref="GeneID:295247"
                     /db_xref="RGD:1564557"
                     /translation="MVKTDIEWPSGEEKSSMARAVVRSTCGFTLGLSLATAYGLLELL
                     AEGHSPFGCLVTTVTLAAFLGLGMGFSRQVRVSVFLLLPQVFSKQSRLLLLVAAFGLV
                     LQGPCANTLRNFTRASEAVACGAELALNQTAEVLERVKQPLVSALTKIKAIAQKAKVV
                     ADRVRKFFRSVMDGVKHVARCLQNMWYWLLHIGDVCNSELGNPYTKCARVFDDAKDNC
                     MKVVPRFHQLCYVLLPFKLVFCGLANLVQLFCVIPMYLQQFLRKTIKTPVMKLLDRVR
                     REFEFNMTATHYFSVDLNASRSLSQVALDLHEAVSMKLYTAREVLSMMGYTMPLLFGL
                     LYIQALYYRYGYLNWDNFDNVYITRRFLDMEAVRSLAGLRTVLPLSSHEARHYVQPGS
                     FFLTRWEQILYIVETFNLARHLLLVLLLVFLDYGVFWILDLARYHLQGEIVARSPVLV
                     SIKVEGTGYSGNIYRDLVSAFDVLQQGNVSILSRRCALRPSEPDANGYIVIGTMYGLC
                     FFVTLFGSYVSRLRRVICASYYPSREQERITYLYNMLLSRRTNIPAAVQRAVRRRAAD
                     QGHMSILQVLATRYPSLSPLLGRFLLHQTYCLGCGQPEEKGGMENFVSCSTPGCRGLY
                     CPTCFRLLDNTCSVCASPLSNQGRLDLELDQDKDINSKEASTASPGRSSGFLRSPLSP
                     RNHFRNPLSPKKPLSSPRTSGSLPLTPK"
ORIGIN      
        1 tcagaactgg ggagcagcgg gttctgagac acacccatcg tacaagcctg cagaacttag
       61 aacaggacga agaattccag gccccacaga acctgaagaa tctccaggag gagacacact
      121 ggcatttggt cccagcagcc atggtcaaaa ctgacataga atggccctct ggggaggaga
      181 agtccagcat ggcacgggct gtggtccgaa gtacctgtgg ctttaccttg gggttgtcct
      241 tggccacagc ctatgggctc ttggagcttc tagcggaagg acacagcccc tttggctgcc
      301 tggtgaccac tgtgactttg gctgccttcc ttggcttggg catggggttc tctcgccagg
      361 tccgggtctc tgtcttcttg ctgcttcctc aggtcttctc caagcagagc cgtttgctgc
      421 tgttggtggc tgcctttggg ctggtgctcc aagggccttg tgccaacacc ctgcgcaact
      481 tcacccgggc aagcgaagct gtggcctgtg gggcagagct ggcactgaac cagacagctg
      541 aagtgctaga gcgggtcaag cagcccctcg tcagtgctct gaccaagatt aaagctattg
      601 cccagaaggc caaagtggtg gctgaccggg tacgcaagtt cttccggtct gtcatggatg
      661 gtgtgaaaca tgtagccagg tgcctgcaga acatgtggta ttggctcctt catattggcg
      721 atgtgtgcaa ctcagagctg ggcaaccctt acacaaaatg tgctcgggtg tttgatgatg
      781 ccaaggacaa ctgtatgaag gtcgtgccgc gattccatca gctgtgttat gtgctcttgc
      841 cattcaaact ggtgttctgt ggacttgcca acttggtcca gttgttctgt gtcatcccca
      901 tgtacctcca acagtttctg cgaaagacca tcaagacccc cgtgatgaaa ctgctcgatc
      961 gggtacgtcg tgagtttgag ttcaacatga cagccaccca ctacttctct gtggacctca
     1021 atgcctctcg gagcctgtcc caggtggctt tggatcttca tgaggctgtc agcatgaagt
     1081 tgtacactgc tagggaggtc ctgtctatga tgggatacac catgcctctg ctctttggac
     1141 ttctctacat ccaagccctc tattatcggt atggttacct gaactgggac aattttgaca
     1201 acgtctatat caccaggcgc tttctggaca tggaggcagt gcgctccttg gcagggctgc
     1261 gtacggtgct gccactcagt tctcacgagg caaggcacta cgtgcagcca ggttccttct
     1321 tcctgacccg atgggaacag attttatata ttgtggagac ctttaacctc gcccgccatc
     1381 tcctccttgt gctcctcctg gtctttctgg actatggcgt cttctggata cttgatctgg
     1441 cccggtacca cctccagggc gagattgtag cccgcagccc tgtgttagtg tctataaagg
     1501 tggaagggac cggttattcg gggaatattt accgtgacct ggtgtcagct tttgacgttc
     1561 tacaacaagg caacgtcagt atattgtccc ggcgctgcgc gcttcgtccc tcagaaccag
     1621 atgctaacgg ttacatcgtt atcggtacca tgtatggtct gtgcttcttc gtcactctgt
     1681 ttggcagcta tgtcagcagg ctgcggcgtg tcatctgtgc ctcctattac ccctccaggg
     1741 agcaggaaag gatcacctac ctctataaca tgcttctgag tcgtcggacc aacatacccg
     1801 ctgcagtgca gcgagcagtg aggcgacggg cagctgacca gggtcacatg agtatcctcc
     1861 aggtgctagc cacccggtac ccttccctaa gtccattgct cggccggttt ttgttgcatc
     1921 agacttattg cctgggttgt gggcagccag aagaaaaggg gggcatggag aactttgtgt
     1981 cctgcagtac cccaggctgc agaggtctct actgccctac ctgttttcgt ctcctggaca
     2041 acacctgttc tgtatgtgcg tctcccctct ccaaccaggg gcgcctagac ctggagcttg
     2101 accaggacaa agacataaac tcaaaggaag catccacagc atctcccgga agatcatcag
     2161 gttttttgag gtccccccta tcccccagaa accacttcag aaatccatta tccccaaaga
     2221 agcccctctc cagccccaga acctccggat ccctcccact tacccccaaa taaaggaagc
     2281 aaaagtggac aca
//
