LOCUS       XM_008763272            2093 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus decapping mRNA 1B (Dcp1b), transcript
            variant X6, mRNA.
ACCESSION   XM_008763272
VERSION     XM_008763272.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008763272.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008763272.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2093
                     /gene="Dcp1b"
                     /note="decapping mRNA 1B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 2 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:500305"
                     /db_xref="RGD:1562214"
     CDS             147..1964
                     /gene="Dcp1b"
                     /codon_start=1
                     /product="mRNA-decapping enzyme 1B isoform X6"
                     /protein_id="XP_008761494.1"
                     /db_xref="GeneID:500305"
                     /db_xref="RGD:1562214"
                     /translation="MAAAAAGGLPGKGHDISLAALRRHDPYINRIVDVASQVALYTFG
                     HRANEWEKTGVEGTLFVYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLY
                     RNGTLSIYGIWFYDKEECQRIAKLMKNLTQCEQLKACHGAGAGSSPVTLSSGEGREVD
                     ILQMLTKAKDEYTKCRSCSEPKQMTSSSAICDNPKLIKPVPVRPSSSQRLHEPTPSKT
                     LDPEPQHLPLTALFGKQDKAPCQETVKPSRTFAHHHHHHHHHQQQEKLPVHHGVACSL
                     ACEDPRKLSLPVEKQLCPAIQKLMVGSMGLHSLPQHPGQWPCESGSPSPAGGILPGPV
                     QLGAPWNGRAAHCTQSTCRSHKLLEQLQGAPAAVHKYSFCAPASPAVTTQVAPGQSVA
                     QSQLVYFSGPLPPPTPGHQALGKEQCAPPAQAVSLSGSQESSPTVLPTQELLRKLQVV
                     QQEQQAAPRPALAARFPVSAQGSGTEKPLEAWVSKTASMEKQAPLLQTVSSQCVPAAV
                     ASLLTPPVVFTQSTCAPLRETDNGLMALGGPELPAASSSLLLPLQNWESSTMASRPLT
                     RLQLQEALLNLIQNDDNFLSIIYEAYLFSVTQAAMRKAT"
ORIGIN      
        1 tcctccagga gaggtccggg ccatcgattg gcgaggccta gcccgggtcc ccaagtgccg
       61 gaaggtcgcc ccgccgcgct cgctcgctcg ctcggcggtc gattaagagg gcttcctgaa
      121 ggctgggcaa gagggtgggt gggaagatgg cggccgcggc ggcaggtggc ctgcctggga
      181 agggacacga tatcagcctg gcagccctgc ggcgccacga cccctacatc aatcgcatcg
      241 tggacgttgc cagccaggtg gctctgtaca ctttcggcca tcgggccaac gagtgggaga
      301 agactggtgt ggaaggaacc ttatttgttt atacaaggtc tgcctctccg aagcacggat
      361 tcaccattat gaataggctc agcatggaaa acagaacaga gcccattact aaagacttgg
      421 acttccagct ccaggaccct ttccttctct acagaaatgg cacactgtcc atttatggaa
      481 tttggtttta tgataaggaa gagtgccaga gaattgcaaa actaatgaaa aacctcactc
      541 agtgtgaaca gttgaaagcc tgtcatggag ctggagcagg atcctcccca gtgaccttga
      601 gttcaggaga gggccgagaa gtagatatcc tgcagatgct caccaaggcc aaagatgagt
      661 acaccaagtg taggagctgt tctgagccaa agcagatgac cagttcttct gccatctgtg
      721 acaaccccaa gctcatcaaa cctgtccccg tgagacccag cagcagccag aggctgcacg
      781 aacccacgcc cagcaagacc ttggaccctg agcctcaaca cttacctttg acagcgctat
      841 ttgggaaaca agacaaagcc ccttgtcagg aaactgtgaa accatcccgg acctttgccc
      901 accaccatca ccatcaccac caccaccagc agcaagagaa gcttccagtt catcacgggg
      961 ttgcatgctc cctggcctgt gaggatccca ggaagctctc actcccagtg gagaagcagc
     1021 tatgcccagc cattcagaaa ctcatggttg ggagcatggg gctgcactcc ctgccacagc
     1081 accctggaca gtggccctgt gaaagtggca gccccagccc tgcaggggga attcttcctg
     1141 gtcctgtcca gctgggggcc ccctggaatg gtagggctgc acactgtaca cagagcactt
     1201 gcagaagcca caagctgtta gagcagcttc aaggtgcccc tgccgcagta cataagtata
     1261 gcttctgtgc acctgccagt ccagccgtga ccactcaggt ggctccaggc cagagtgtgg
     1321 cccagtcaca gctggtgtat ttcagtggcc cccttccacc tcccacgcca ggacatcagg
     1381 ctctcgggaa ggagcagtgt gcaccaccag cacaagcggt gtcgctctct ggcagccagg
     1441 agagcagccc cactgtgctc cctactcagg agctgctaag aaagctccag gtagtacaac
     1501 aggagcagca ggcagccccc cggccagcct tggcagccag gttccctgtg tcagcccagg
     1561 gatcagggac agaaaagccc ttggaagcct gggtcagcaa gacagccagc atggagaaac
     1621 aggctcctct tctgcagacc gtgtcatctc agtgtgtccc tgctgcagtg gcttctctgc
     1681 tcacaccccc tgtggttttc acacagtcta cctgtgcccc actgagagag actgataatg
     1741 ggctcatggc cctaggaggc ccagaacttc ctgctgcctc ctccagcctc cttctgcccc
     1801 tgcagaactg ggaatcctcc accatggcca gcaggcccct caccaggctg cagctccagg
     1861 aggcactgct gaacctcatc cagaatgacg acaacttctt aagcataatc tacgaagcct
     1921 atctcttcag cgtgacacaa gccgccatga gaaaagccac gtgaccagct acctgagagc
     1981 aaagactgag aactggtttt ccggggtctt cctgtgaact ggtgtgacca aacacattta
     2041 tgccttttta acaaagtata gtgatgcaga gtaaaatgtt ttgtactatc caa
//
