LOCUS       NM_001195807            1172 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus doublecortin domain containing 2C (Dcdc2c), mRNA.
ACCESSION   NM_001195807 XM_001075564 XM_576011
VERSION     NM_001195807.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1172)
  AUTHORS   Jumeau,F., Chalmel,F., Fernandez-Gomez,F.J., Carpentier,C.,
            Obriot,H., Tardivel,M., Caillet-Boudin,M.L., Rigot,J.M., Rives,N.,
            Buee,L., Sergeant,N. and Mitchell,V.
  TITLE     Defining the human sperm microtubulome: an integrated genomics
            approach
  JOURNAL   Biol Reprod 96 (1), 93-106 (2017)
   PUBMED   28395323
REFERENCE   2  (bases 1 to 1172)
  AUTHORS   Dijkmans,T.F., van Hooijdonk,L.W., Fitzsimons,C.P. and
            Vreugdenhil,E.
  TITLE     The doublecortin gene family and disorders of neuronal structure
  JOURNAL   Cent Nerv Syst Agents Med Chem 10 (1), 32-46 (2010)
   PUBMED   20236041
  REMARK    Review article
REFERENCE   3  (bases 1 to 1172)
  AUTHORS   Reiner,O., Coquelle,F.M., Peter,B., Levy,T., Kaplan,A., Sapir,T.,
            Orr,I., Barkai,N., Eichele,G. and Bergmann,S.
  TITLE     The evolving doublecortin (DCX) superfamily
  JOURNAL   BMC Genomics 7, 188 (2006)
   PUBMED   16869982
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On or before Sep 30, 2010 this sequence version replaced
            XM_001075564.1, XM_576011.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-370               JAXUCZ010000006.1  50906070-50906439   c
            371-422             JAXUCZ010000006.1  50902253-50902304   c
            423-499             JAXUCZ010000006.1  50893797-50893873   c
            500-628             JAXUCZ010000006.1  50888665-50888793   c
            629-766             JAXUCZ010000006.1  50883990-50884127   c
            767-809             JAXUCZ010000006.1  50882532-50882574   c
            810-933             JAXUCZ010000006.1  50880226-50880349   c
            934-1034            JAXUCZ010000006.1  50878628-50878728   c
            1035-1103           JAXUCZ010000006.1  50868965-50869033   c
            1104-1172           JAXUCZ010000006.1  50868646-50868714   c
FEATURES             Location/Qualifiers
     source          1..1172
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q16"
     gene            1..1172
                     /gene="Dcdc2c"
                     /gene_synonym="RGD1559651"
                     /note="doublecortin domain containing 2C"
                     /db_xref="GeneID:500637"
                     /db_xref="RGD:1559651"
     exon            1..370
                     /gene="Dcdc2c"
                     /gene_synonym="RGD1559651"
                     /inference="alignment:Splign:2.1.0"
     CDS             84..1172
                     /gene="Dcdc2c"
                     /gene_synonym="RGD1559651"
                     /codon_start=1
                     /product="doublecortin domain-containing protein 2C"
                     /protein_id="NP_001182736.1"
                     /db_xref="GeneID:500637"
                     /db_xref="RGD:1559651"
                     /translation="MGTRGPYALVDTTPAKTILVYRNGDQFYVGRKFVFSRRRVANFE
                     ALLEQLTEQVEVPFGVRRLYTPTYGHRVLELESLQTGGKYVAAGRERFKKLDYIHIVP
                     RKPTKMRKLKEIKPVVHCDINVPSRWQTQSRTSRYINVFTNGRLFIPPIKIIIPKFSL
                     SDWNSVLAMIGEKVFPLGGVRKLFTMDGHLLDDSKNLQDNYFYVAAGLESFKSIPYWK
                     SSWVPSEVQQRFGRNDKYTQTKKRVEYKGKEPLQSDSVPPKIQDSVYYAKEKKQMDTE
                     PLIESGAEGDVYKAQTPAKEAQEALEVKEDPDMKVELPVDQAPAEIVKEIDEIGSGSP
                     GLESGMVLGYRQVGVVEYSGFWEGSFLQ"
     exon            371..422
                     /gene="Dcdc2c"
                     /gene_synonym="RGD1559651"
                     /inference="alignment:Splign:2.1.0"
     exon            423..499
                     /gene="Dcdc2c"
                     /gene_synonym="RGD1559651"
                     /inference="alignment:Splign:2.1.0"
     exon            500..628
                     /gene="Dcdc2c"
                     /gene_synonym="RGD1559651"
                     /inference="alignment:Splign:2.1.0"
     exon            629..766
                     /gene="Dcdc2c"
                     /gene_synonym="RGD1559651"
                     /inference="alignment:Splign:2.1.0"
     exon            767..809
                     /gene="Dcdc2c"
                     /gene_synonym="RGD1559651"
                     /inference="alignment:Splign:2.1.0"
     exon            810..933
                     /gene="Dcdc2c"
                     /gene_synonym="RGD1559651"
                     /inference="alignment:Splign:2.1.0"
     exon            934..1034
                     /gene="Dcdc2c"
                     /gene_synonym="RGD1559651"
                     /inference="alignment:Splign:2.1.0"
     exon            1035..1103
                     /gene="Dcdc2c"
                     /gene_synonym="RGD1559651"
                     /inference="alignment:Splign:2.1.0"
     exon            1104..1172
                     /gene="Dcdc2c"
                     /gene_synonym="RGD1559651"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcccgcagcc cgagggagcc ggtgggtgtg ctgggcgcct tcttgcacag ttctgcatgt
       61 cccgaggcta gcgagcagtg gccatgggca cacgcggacc ctatgcgctg gtggacacca
      121 cgccggccaa gaccatcttg gtgtaccgca acggggacca gttctatgtg gggcgtaagt
      181 tcgtgttctc ccggcgccgc gtagctaact tcgaggctct gctggagcag ctgaccgagc
      241 aggtggaggt gccctttggt gtgcggcgac tctacacgcc cacttatggc caccgggtgc
      301 tcgaactgga gtcgctgcag accggtggca agtacgtggc tgccggccgg gagcgcttca
      361 agaagctgga ctatattcat atagttccca gaaaacctac aaagatgaga aagttgaagg
      421 aaatcaagcc ggtggtacat tgtgatatca acgtgccttc caggtggcaa acacagagca
      481 ggacatcccg atacataaat gtgttcacaa atggaagatt atttatccct cctataaaaa
      541 ttattatacc caaattcagc ctgtcggatt ggaatagtgt gctggccatg attggagaaa
      601 aagtcttccc tctaggagga gttcgaaaat tgtttacaat ggacggacat cttttggatg
      661 actcaaagaa tttgcaagac aattattttt atgttgctgc aggactggag tctttcaaat
      721 ccattcctta ctggaagtcc tcatgggtcc ccagtgaggt ccagcagagg tttggaagga
      781 atgataaata cacacaaacc aagaaaagag tggagtacaa aggaaaagaa cctcttcaaa
      841 gtgacagtgt accacctaaa attcaggatt ctgtttatta tgccaaagag aaaaagcaga
      901 tggatacaga acctttaatt gaaagtggtg cagaaggtga tgtatataaa gcacagactc
      961 ctgccaagga ggcccaagaa gcactggaag tcaaggaaga cccagatatg aaggtggagt
     1021 tgccagttga tcaggcaccg gctgaaattg ttaaagaaat cgatgagata ggcagtggca
     1081 gccctggcct tgaaagcggc atggttttag gctataggca ggtgggggtg gtggagtaca
     1141 gcggcttctg ggagggtagc ttcctgcaat ga
//
