LOCUS       NM_001014231            2952 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus DDB1 and CUL4 associated factor 8 (Dcaf8), mRNA.
ACCESSION   NM_001014231 XM_344173
VERSION     NM_001014231.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2952)
  AUTHORS   Wu,F., Wang,S., Xing,J., Li,M. and Zheng,C.
  TITLE     Characterization of nuclear import and export signals determining
            the subcellular localization of WD repeat-containing protein 42A
            (WDR42A)
  JOURNAL   FEBS Lett 586 (8), 1079-1085 (2012)
   PUBMED   22500989
REFERENCE   2  (bases 1 to 2952)
  AUTHORS   Jin,J., Arias,E.E., Chen,J., Harper,J.W. and Walter,J.C.
  TITLE     A family of diverse Cul4-Ddb1-interacting proteins includes Cdt2,
            which is required for S phase destruction of the replication factor
            Cdt1
  JOURNAL   Mol Cell 23 (5), 709-721 (2006)
   PUBMED   16949367
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085957.1.
            
            [WARNING] On May 2, 2024 this sequence was replaced by
            NM_001014231.2.
            
            On Apr 20, 2005 this sequence version replaced XM_344173.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085957.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2952
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q24"
     gene            1..2952
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /note="DDB1 and CUL4 associated factor 8"
                     /db_xref="GeneID:364050"
                     /db_xref="RGD:1308513"
     exon            1..141
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     exon            142..214
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     exon            215..282
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     CDS             234..2009
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /note="WD repeat-containing protein 42A; WD repeat domain
                     42A"
                     /codon_start=1
                     /product="DDB1- and CUL4-associated factor 8"
                     /protein_id="NP_001014253.1"
                     /db_xref="GeneID:364050"
                     /db_xref="RGD:1308513"
                     /translation="MSSKRPSTDGRRDLANGSLSSSPEEMSGAEEGRETSSGIEVEAS
                     DLSLSLTGDDGGPNRTSTESRGTDTESSGEEKDSDSMEDTGHYSINDENRVHGHSDEE
                     EEEEQPRHRVQRKRASRDQDSSDDERALEDWVSSETTALPRPRWQALPALRERELGSS
                     ARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVR
                     RQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSATQCCKNTKRVAQH
                     KGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEKKVGLYTIYVN
                     PANTHQFAVGGRDQFVRIYDQRKIDENENNGVLKKFCPHHLVNSESKANITCLVYSHD
                     GTELLASYNDEDIYLFNSSHSDGAQYIKRYKGHRNNATVKGVNFYGPKSEFVVSGSDC
                     GHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAEASTE
                     LTGLKDVIKKNKRERDEDSLHHTDLFDSHMLWFLMHHLRQRRHHRRWREPGVGATDAD
                     SDESPSSSDTSDEEEGPDRVQCMPS"
     exon            283..938
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     exon            939..1079
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     exon            1080..1174
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     exon            1175..1285
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     exon            1286..1358
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     exon            1359..1416
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     exon            1417..1524
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     exon            1525..1655
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     exon            1656..1775
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     exon            1776..1892
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
     exon            1893..2920
                     /gene="Dcaf8"
                     /gene_synonym="RGD1308513; Wdr42a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtggacgggg cggctgggcc tggaacagtt ggagcatccg ctggcagaag gatgacccta
       61 gatgggaagc gggctgccgg gcctcgccag ctcccgtgct tgtaactgcc ccagccggac
      121 gccctcccct tgacctaccg gttcttcagc gaaccttcag accagttttc tcaggatcgt
      181 gggccagact tcggtcggcg ataaaaacag caaggctggc taccatattc aagatgtcca
      241 gtaaaaggcc cagcacagat gggagaagag acttggctaa cggaagcctg tctagcagtc
      301 cagaagaaat gtctggagct gaagaaggga gggaaacatc ttcggggatt gaagtagagg
      361 cctcagacct gagtttgagc ttgactgggg acgatggtgg ccccaaccgc accagcacag
      421 aaagtcgtgg cacagacaca gagagctcag gtgaagaaaa ggactctgac agcatggagg
      481 acacaggcca ttattccatc aacgatgaaa accgagttca cggccactca gatgaagagg
      541 aggaggagga gcaacctcgg caccgagtcc agcgcaaacg ggccagccgt gaccaggact
      601 catcagatga tgagcgagcc ctggaagact gggtatcttc agagacaaca gctttacccc
      661 ggcctcgctg gcaagccctt cctgcccttc gggagcggga attgggttca agtgcccgct
      721 ttgtgtatga ggcttgtgga gcaagagtct ttgtacagcg tttccgcctg cagcatgggc
      781 ttgagggcca tacaggttgt gtcaatactt tgcactttaa ccagcgtggc acctggctgg
      841 ccagtggcag tgatgacctg aaggtggtag tgtgggattg ggtgcggcgg cagcccgtac
      901 tggactttga gagtggccac aaaagtaatg tcttccaggc caagttcctt cctaacagtg
      961 gtgactccac cctggctatg tgtgcccggg atgggcaggt ccgagtcgca gaactgtctg
     1021 ctacacagtg ctgcaagaac accaagcgtg tggcccagca caagggagca tcccacaagt
     1081 tggccctaga accagactct ccctgcacgt tcctgtcggc tggtgaagat gccgttgtct
     1141 tcaccatcga cctaagacaa gaccggccag cttcgaaact ggtggtgaca aaggagaagg
     1201 agaagaaagt ggggctgtat acaatctacg tgaaccctgc caatacccac cagtttgcag
     1261 tgggtggacg cgatcagttt gttaggattt atgaccagag gaaaattgat gagaatgaga
     1321 acaatggtgt cctgaaaaaa ttctgtcctc accacttggt gaacagtgag tccaaagcaa
     1381 acatcacctg tcttgtgtac agccacgacg gcacagagct cctggccagt tacaatgatg
     1441 aagacattta ccttttcaac tcttctcaca gtgatggggc ccagtatatt aagagatata
     1501 aaggtcatag aaataatgct acagtaaaag gcgtcaattt ctatggcccc aagagtgagt
     1561 ttgtggtgag cggtagtgac tgtggtcaca tcttcctctg ggagaagtca tcttgccaga
     1621 tcattcagtt catggaaggg gacaagggag gtgtggtaaa ctgtcttgag ccccatcctc
     1681 acctacctgt tttggcaacc agtggcctag accatgatgt gaagatctgg gcaccaacag
     1741 cagaagcctc cactgagcta acagggttaa aggatgtgat caagaagaac aagcgagagc
     1801 gggatgagga cagcttgcat cacactgacc tgtttgatag tcacatgctg tggttcctta
     1861 tgcaccacct gagacagaga cgccatcatc ggcgctggcg agaacctggg gttggggcca
     1921 cagatgcgga ctctgatgag tctcccagct cctcagacac atcggacgag gaggagggcc
     1981 ctgaccgggt gcagtgcatg ccatcctgag gccccaaact tgggagggat gggccggggc
     2041 tgctgacccg ctcctgcctg ggcagctctt tttcagcccc aggcccttac attcaacaga
     2101 aatgcacttt ggactttttg tttaaataaa agaaagctat ctgaggagga cagagcacgg
     2161 gaggttgagc cagcagagaa cccctagaag tgagagatga gaccgagccc tgaatgaggt
     2221 tccatggaag gtgcgaagga ctcagagaag tgggcctttc cctgaagcct ttcgtcaact
     2281 ggcttctttt tcttcttttt ctttaacctc ccttgtttct tttggagggt ggggggtgta
     2341 gtaccaacgg gccagagaga agggtaggaa ggccgctctc tttggtttag ggttttcacc
     2401 tttttttccc tttgtttttt aagaagtctg acagttgcat taggggggtt tttgtttgtt
     2461 ttcttttttt gttttttttt ttttttgttt ttttttgggg gggggttgcc cctgagcaag
     2521 cacatcccag gatcctgttt ttctgggaaa tccttaagag cccccagcca tcccagcacc
     2581 ccctctctct ccctcccaca acacttaatt ctctgtcctt accacagtac tttgctctct
     2641 cttcatccgt caccctctaa atggggtctg ggatggagac tggagatgtg ggagggtcaa
     2701 gaggtggaag aacaggaaaa gttacctctt ggttttgttt ttaactgttc agtggcagca
     2761 atttccctgt ccctatcact gttagaggcc taattttata tctataaata tattaaaaag
     2821 caagttaaac ttggatgtat caagttaaaa ttattgtcag aagtttaaat acctatatat
     2881 tctctatgaa cacaatgcaa taaaggggct ggaagacgaa aaaaaaaaaa aaaaaaaaaa
     2941 aaaaaaaaaa aa
//
