LOCUS       NM_001108716            2023 bp    mRNA    linear   ROD 17-JUL-2023
DEFINITION  Rattus norvegicus DDB1 and CUL4 associated factor 4 (Dcaf4), mRNA.
ACCESSION   NM_001108716 XM_001056278 XM_343088
VERSION     NM_001108716.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Jin J, Arias EE, Chen J, Harper JW and Walter JC.
  TITLE     A family of diverse Cul4-Ddb1-interacting proteins includes Cdt2,
            which is required for S phase destruction of the replication factor
            Cdt1
  JOURNAL   Mol Cell 23 (5), 709-721 (2006)
   PUBMED   16949367
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473982.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_343088.3, XM_001056278.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q31"
     gene            1..2023
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /note="DDB1 and CUL4 associated factor 4"
                     /db_xref="GeneID:362762"
                     /db_xref="RGD:1306241"
     exon            1..125
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     exon            126..222
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     CDS             134..1690
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /note="WD repeat domain 21"
                     /codon_start=1
                     /product="DDB1- and CUL4-associated factor 4"
                     /protein_id="NP_001102186.1"
                     /db_xref="GeneID:362762"
                     /db_xref="RGD:1306241"
                     /translation="MDKNIWTSRRRRGRSHHRSPALRQCDSSERYTSGASQSSQDSGH
                     HDVECPSTSSSKAGESSVPDLPGFYFDPEKNRYFRLLPGHNNCNPLTKEGIQLKEMES
                     RRLQLLQQEDKQKKKIARVGFNASSILRKNQLGFLNFSSYCRLSHELRVACMERKKVE
                     IQSSDPSALASDRFNFILADTTSDRLFTVNDVKIGGSKYGIISLQGLKAPTFEVHMHE
                     NLYFTNRKVNSVCWASLNHLDSHILLCLMGLAETPGCATLLPASLFVSSHQGTDQPGM
                     LCSFRIPGAWSCAWSLNVQANNCFSTGLSRRVLLTNVVTGHRQSYWTNSDVLAQQFAV
                     KTPLLFNGCRSGEIFAIDLRSPSQAKGWKATQIFHDSAVTSVQVFKEEQYLMASDMAG
                     KIKLWDLRATKCVRQYEGHVNEYAYLPLHMHEEEGILVAVGQDCYTRIWSLHDARLLR
                     TIPSPCPTSKANIPSVAFSPRLGGPRGAPGLLMAVQQDLYCFPYSSSCPDGLKEGRWE
                     PSSVSKEDIL"
     exon            223..323
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     exon            324..481
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     exon            482..564
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     exon            565..667
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     exon            668..811
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     exon            812..861
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     exon            862..941
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     exon            942..1040
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     exon            1041..1138
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     exon            1139..1312
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     exon            1313..1427
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
     exon            1428..2023
                     /gene="Dcaf4"
                     /gene_synonym="Wdr21"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaagaaccgg tcgctttagt cctatgggct gcgacaacac agaacatggg tgtctttccg
       61 gatcttcgca cgcctctggg tactccaggc cagccgtgtt gtgtctgaga ggaccgtctg
      121 cgcaggaaca gaaatggata agaacatctg gacgagtagg agaagacgag ggcgaagcca
      181 ccaccgtagc cctgccctca ggcagtgtga ttccagtgag aggtacacct caggggcgtc
      241 tcagagctcg caagattccg gccaccatga tgttgagtgc ccatcaacct cgtccagcaa
      301 agctggagag tcttcagtgc cagaccttcc aggtttttac tttgaccctg agaagaaccg
      361 atacttccgt ttgctcccgg gtcataacaa ctgcaacccc ctcacgaagg agggcatcca
      421 gctcaaggag atggagagca ggaggctgca gctgctgcag caagaggaca agcagaaaaa
      481 gaaaattgcc agagtgggat ttaatgcatc gtccatccta cggaaaaatc agctgggttt
      541 tctcaacttc tccagttatt gccgtctctc ccacgagctt cgggtggcct gcatggagag
      601 gaaaaaggta gagattcaga gctcagaccc ttcagctctg gcgagtgacc gctttaactt
      661 catcctggca gacactacca gtgaccgcct cttcacggtg aatgacgtca aaatcggagg
      721 ctccaagtac ggcatcatca gcctgcaggg tctgaaggcc cccacgttcg aggtgcacat
      781 gcacgagaac ctgtacttta ccaacaggaa ggtgaactct gtgtgctggg cctcactcaa
      841 tcacttggac tcccacattc tgctgtgcct catgggcctt gcagagacgc caggctgtgc
      901 caccttgctc ccagcatcac tgtttgtcag cagtcaccaa ggtaccgacc agcctggcat
      961 gctgtgtagt ttccggatcc ctggggcctg gtcctgtgcc tggtccttga acgtccaggc
     1021 aaataactgc ttcagtacag gtttgtctcg gagggtcctg ctgaccaacg tggtgacagg
     1081 acaccggcag tcatattgga ccaacagtga cgtcttggcc cagcagtttg cagtcaagac
     1141 tcctttgctg tttaatggct gtcgttctgg ggagatcttt gccattgacc tgcgttctcc
     1201 aagtcaagcc aagggctgga aggctactca aatcttccat gactcagcag tgacctctgt
     1261 gcaggtcttc aaggaggagc agtacctgat ggcgtcagac atggctggaa agatcaagct
     1321 gtgggacctg agagccacta aatgtgtgag acaatacgaa ggtcacgtga atgagtacgc
     1381 ctacctgcca ctgcatatgc acgaggagga aggaatcctg gtggcagtgg gccaagactg
     1441 ctacacaaga atctggagcc tccatgatgc ccggctgctc agaaccatac cttctccatg
     1501 cccgacctcc aaggccaaca ttcccagtgt ggccttctct cctcggcttg ggggcccccg
     1561 gggagcccca gggctgctca tggctgtcca gcaggacctt tactgtttcc catacagctc
     1621 gtcctgtcca gatggtctga aggagggcag gtgggagccc tcttctgttt ctaaggagga
     1681 cattttataa acggcgcttg ctgttcagat ggagtccttc agcctcgggc agaatgcaaa
     1741 gtgactgact caggagctgg agagatggct caatggttaa gcatgggctg ctcttccgga
     1801 ggtcccaggt tcaattccca ccaaccacat ggcagctcac acccatctca gaatccggca
     1861 ccctcttctg atctccttgg caccaggcac acacgatata tgaatagaac ataacaggca
     1921 aaacacccat acacataaaa taaaattttt tttcaatttt ctaattttgt caaagtacat
     1981 tatgtggaac aatgtcaata aaggctcaga gcacgaaagg cct
//
