LOCUS       NM_001009686            2614 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus DDB1 and CUL4 associated factor 11 (Dcaf11),
            transcript variant 1, mRNA.
ACCESSION   NM_001009686 XM_240183
VERSION     NM_001009686.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Jin,J., Arias,E.E., Chen,J., Harper,J.W. and Walter,J.C.
  TITLE     A family of diverse Cul4-Ddb1-interacting proteins includes Cdt2,
            which is required for S phase destruction of the replication factor
            Cdt1
  JOURNAL   Mol Cell 23 (5), 709-721 (2006)
   PUBMED   16949367
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC091364.1.
            
            On Mar 27, 2005 this sequence version replaced NM_001009686.1.
            
            Transcript Variant: This variant (1) is the protein-coding variant.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091364.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132263
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p13"
     gene            1..2614
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /note="DDB1 and CUL4 associated factor 11"
                     /db_xref="GeneID:305895"
                     /db_xref="RGD:1311288"
     exon            1..47
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            48..415
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     CDS             261..1910
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /note="WD repeat-containing protein 23; WD repeat domain
                     23"
                     /codon_start=1
                     /product="DDB1- and CUL4-associated factor 11"
                     /protein_id="NP_001009686.1"
                     /db_xref="GeneID:305895"
                     /db_xref="RGD:1311288"
                     /translation="MGSRNSSSAGSGSLEPSEGLSRRGAGLRRSEEEEEEDEDVDLAQ
                     VLAYLLRRGQVRLVQGGGAANLQLIQALSDSEEEHDSAWDGRLGDRYNPPVDATPDTR
                     ELEYNEIKTRVELATGRLGLGRTAQEHSFPRMLHQRERGLCHRGSFSLGEQSRVMSHF
                     LPNDLSFTDTYSQKAFCGIYSKDGQIFMSACQDQTIRLYDCRYGRFHKFKSIKARDVG
                     WSVLDVAFTPDGNHFLYSSWSDYIHICSIYGEGDTHTALDLRPDERRFAVFSIAVSSD
                     GREVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISSQILFSGGDDAICKV
                     WDRRTMREDDPKPVGALAGHQDGITFIDSKGDARYLISNSKDQTIKLWDIRRFSSREG
                     MEASRLAATQQNWDYRWQQVPKKAWKKLKLPGDSSLMTYRGHGVLHTLIRCRFSPAHS
                     TGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGSLR
                     LWQYRQAEYFQDDMTESDRNRVCSSGPAPVPCPSVAFSSPQ"
     exon            416..543
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            544..671
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            672..736
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            737..837
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            838..984
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            985..1039
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            1040..1108
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            1109..1166
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            1167..1352
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            1353..1506
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            1507..1659
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            1660..1766
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
     exon            1767..2593
                     /gene="Dcaf11"
                     /gene_synonym="Wdr23"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagaggttat ctgggattcg gccaccctgg gccggggact ttgataggat tgaggaaggt
       61 ttatgttccc gaaaccttgg gagctgtcat agctaaagag aaggaaatct cagtctccta
      121 gaggggtcac ccctctaaag atagcttctg ccccgtttct ggaaaccctg atatttctag
      181 agcaggattt gctttcacca aacccaattt ggagacagga gaagtccctg cacaggatat
      241 aaggatgctg taaccagaac atgggatcac ggaacagcag cagcgcagga tccgggtcct
      301 tagaaccctc cgagggcttg tcccgaagag gggctggcct gcgtcgtagt gaggaagaag
      361 aagaagagga tgaagatgtg gatctggccc aggtactggc ctatctcctc cgcagaggcc
      421 aagtgaggtt ggtgcaaggt ggaggtgcag caaatttaca actcatccag gccctctcag
      481 actcagagga agagcatgac agtgcctggg acggtcgcct tggagatcga tacaacccac
      541 ctgtggatgc aacccctgac acccgggagc tggagtacaa tgagatcaaa actcgggtgg
      601 aattggccac ggggcggcta ggactcggga ggactgctca ggagcatagc ttccctcgaa
      661 tgctacacca gagagaacgg ggcctctgcc accggggaag cttctccctt ggagaacagt
      721 ctcgagtgat gtctcacttc ttgcccaatg atctaagctt cactgatacc tactctcaga
      781 aggctttctg tggcatctac agcaaagatg gtcaaatctt catgtccgct tgccaagatc
      841 aaacaatccg actgtacgac tgtcggtatg gccgcttcca caagtttaaa agcatcaagg
      901 cccgggatgt aggctggagt gtcctggatg tggccttcac tcctgatgga aaccacttcc
      961 tgtactccag ctggtctgac tacattcata tctgcagcat ctatggggaa ggagacacac
     1021 acactgccct ggatttaagg ccagatgaac gtcgctttgc tgtcttttcc attgctgtct
     1081 cctcagatgg acgagaagta ctaggaggag ccaatgatgg ctgcctttat gtctttgacc
     1141 gtgaacaaaa ccggcgtact cttcagattg agtctcatga ggatgatgtg aatgcagtgg
     1201 cctttgctga cataagctcc cagatcctgt tctctggggg agacgatgcc atctgcaaag
     1261 tgtgggaccg acgcaccatg cgggaggatg accccaagcc tgtgggggca ctggctggcc
     1321 accaggatgg catcaccttc attgacagca agggtgatgc ccggtatctc atctccaact
     1381 ccaaagatca gaccattaag ctctgggata tcagacgctt ttccagccga gaaggcatgg
     1441 aagcgtcacg actggctgcc acacagcaga actgggacta tcgctggcag caggtgccca
     1501 agaaagcctg gaagaagttg aagctcccag gtgacagctc cttgatgacc tacagaggcc
     1561 atggagtgct tcacactctg atccgatgcc gattctcccc agcccacagc acgggccagc
     1621 agttcatcta cagcggctgt tctactggca aagtggttgt atatgacctc ttaagcggcc
     1681 acattgtgaa gaagctgacc aatcacaagg cctgtgtgcg tgatgtcagt tggcatccct
     1741 ttgaagaaaa gattgtcagc agttcgtggg atgggagcct acgcctgtgg cagtaccgcc
     1801 aagctgagta cttccaggat gacatgaccg agtctgacag gaacagagtc tgttccagtg
     1861 gccctgctcc ggtgccctgc ccatctgtgg ccttttcctc acctcagtag atctgacctc
     1921 cagttctgtg tagggtgaat tctcagcata ttctctgcct cctccttcct ttccccattt
     1981 ggggagtaag tggaagaact gctgacactg ggtagtgaga gacagaaacc cagagtctgg
     2041 gcccaggctg agcctggact acccgtcccc aaactgggcc aagtggtttc ctcatgcatt
     2101 catacccagt ctgcttggat ttctatctct agccagaatg tggccggaca tccattatct
     2161 ggggtgcagc ttctgccaac aagagtcttg agtgttttaa tcatgttctg atgttagata
     2221 tggctcatag tgtagacacg aggtctaaat agacccatta gccttttgcc caggtcttca
     2281 caccaagagt tagattgacc aaccagggcc cagtatactg gcctttcttt ctgagatctt
     2341 tgagggagga cagggtgggc agggacgtgt ttcctcagca ccctctgggg taggaactgt
     2401 gtctgctctc atacttggcc tttgaagtga agagactggt ctgatgtgtg ggtctcagaa
     2461 gctccgcagg gccctacttg ccattggatc ctgtctttgc tggtggccag cagcttcaac
     2521 aaaagaggat aaaacaggac ttcttccacc ttttcactgg ctgtggctct cccaataaac
     2581 tgtctgtggg aaaaaaaaaa aaaaaaaaaa aaaa
//
