LOCUS       NM_001025742            1574 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus DAZ associated protein 1 (Dazap1), mRNA.
ACCESSION   NM_001025742 XM_343164
VERSION     NM_001025742.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Zheng S, Damoiseaux R, Chen L and Black DL.
  TITLE     A broadly applicable high-throughput screening strategy identifies
            new regulators of Dlg4 (Psd-95) alternative splicing
  JOURNAL   Genome Res 23 (6), 998-1007 (2013)
   PUBMED   23636947
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (bases 1 to 1574)
  AUTHORS   Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein
            C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J and
            Hentze MW.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (bases 1 to 1574)
  AUTHORS   Hsu LC, Chen HY, Lin YW, Chu WC, Lin MJ, Yan YT and Yen PH.
  TITLE     DAZAP1, an hnRNP protein, is required for normal growth and
            spermatogenesis in mice
  JOURNAL   RNA 14 (9), 1814-1822 (2008)
   PUBMED   18669443
REFERENCE   5  (bases 1 to 1574)
  AUTHORS   Pan HA, Lin YS, Lee KH, Huang JR, Lin YH and Kuo PL.
  TITLE     Expression patterns of the DAZ-associated protein DAZAP1 in rat and
            human ovaries
  JOURNAL   Fertil Steril 84 Suppl 2, 1089-1094 (2005)
   PUBMED   16209998
  REMARK    GeneRIF: This study shows expression patterns of DAZAP1 in rat
            corpus luteum cells and demonstrates the in vivo interaction of
            DAZ-like protein (DAZL) with DAZAP1.
REFERENCE   6  (bases 1 to 1574)
  AUTHORS   Hori T, Taguchi Y, Uesugi S and Kurihara Y.
  TITLE     The RNA ligands for mouse proline-rich RNA-binding protein (mouse
            Prrp) contain two consensus sequences in separate loop structure
  JOURNAL   Nucleic Acids Res 33 (1), 190-200 (2005)
   PUBMED   15647502
  REMARK    Publication Status: Online-Only
REFERENCE   7  (bases 1 to 1574)
  AUTHORS   Moore FL, Jaruzelska J, Dorfman DM and Reijo-Pera RA.
  TITLE     Identification of a novel gene, DZIP (DAZ-interacting protein),
            that encodes a protein that interacts with DAZ (deleted in
            azoospermia) and is expressed in embryonic stem cells and germ
            cells
  JOURNAL   Genomics 83 (5), 834-843 (2004)
   PUBMED   15081113
REFERENCE   8  (bases 1 to 1574)
  AUTHORS   Vera Y, Dai T, Hikim AP, Lue Y, Salido EC, Swerdloff RS and Yen PH.
  TITLE     Deleted in azoospermia associated protein 1 shuttles between
            nucleus and cytoplasm during normal germ cell maturation
  JOURNAL   J Androl 23 (5), 622-628 (2002)
   PUBMED   12185095
REFERENCE   9  (bases 1 to 1574)
  AUTHORS   Dai T, Vera Y, Salido EC and Yen PH.
  TITLE     Characterization of the mouse Dazap1 gene encoding an RNA-binding
            protein that interacts with infertility factors DAZ and DAZL
  JOURNAL   BMC Genomics 2, 6 (2001)
   PUBMED   11604102
REFERENCE   10 (bases 1 to 1574)
  AUTHORS   Tsui S, Dai T, Roettger S, Schempp W, Salido EC and Yen PH.
  TITLE     Identification of two novel proteins that interact with
            germ-cell-specific RNA-binding proteins DAZ and DAZL1
  JOURNAL   Genomics 65 (3), 266-273 (2000)
   PUBMED   10857750
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC098930.1.
            
            On Jul 22, 2005 this sequence version replaced XM_343164.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098930.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760400
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..1574
                     /gene="Dazap1"
                     /note="DAZ associated protein 1"
                     /db_xref="GeneID:362836"
                     /db_xref="RGD:1305280"
     exon            1..163
                     /gene="Dazap1"
                     /inference="alignment:Splign:2.1.0"
     CDS             135..1352
                     /gene="Dazap1"
                     /codon_start=1
                     /product="DAZ-associated protein 1"
                     /protein_id="NP_001020913.1"
                     /db_xref="GeneID:362836"
                     /db_xref="RGD:1305280"
                     /translation="MNSAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKD
                     KTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWK
                     GPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF
                     EDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQPGASQWGSRVAPSAANGWA
                     GQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPP
                     QGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAPDMS
                     KPPTAQPDFPYGQYGYGQDLSGFGQGFSDPSQQPPSYGGPSVPGSGGPPAGGSGFGRG
                     QNHNVQGFHPYRR"
     exon            164..204
                     /gene="Dazap1"
                     /inference="alignment:Splign:2.1.0"
     exon            205..371
                     /gene="Dazap1"
                     /inference="alignment:Splign:2.1.0"
     exon            372..437
                     /gene="Dazap1"
                     /inference="alignment:Splign:2.1.0"
     exon            438..545
                     /gene="Dazap1"
                     /inference="alignment:Splign:2.1.0"
     exon            546..594
                     /gene="Dazap1"
                     /inference="alignment:Splign:2.1.0"
     exon            595..677
                     /gene="Dazap1"
                     /inference="alignment:Splign:2.1.0"
     exon            678..831
                     /gene="Dazap1"
                     /inference="alignment:Splign:2.1.0"
     exon            832..861
                     /gene="Dazap1"
                     /inference="alignment:Splign:2.1.0"
     exon            862..1002
                     /gene="Dazap1"
                     /inference="alignment:Splign:2.1.0"
     exon            1003..1179
                     /gene="Dazap1"
                     /inference="alignment:Splign:2.1.0"
     exon            1180..1544
                     /gene="Dazap1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcgcagcga ccgttggcgc ggagggagga ggctcagcgc cgccgccgtt gcgcagatcc
       61 gggccgcggc tgcggggagg gacgagcggt gaccttccgg aggagcgggg cgcagcgggc
      121 cgggacgggg cgccatgaac agcgcgggcg ccgacgaaat cgggaagctc tttgtgggcg
      181 gcctggactg gagtaccact caagagactc tgcgcagcta cttttcccag tatggtgagg
      241 ttgtggattg tgtcatcatg aaagataaaa ccaccaacca gtctcgaggc tttggatttg
      301 tcaagtttaa agaccccaat tgtgtgggga cagtgctggc cagcagacca cacaccctag
      361 atggccggaa tattgacccg aagccatgca cacctcgggg gatgcagcca gagcgaacgc
      421 ggcccaagga aggctggaaa ggacccagga gcgacagcag caaatccaac aagatctttg
      481 ttgggggcat tccccacaac tgcggcgaga cggagctcag ggagtacttc aagaagtttg
      541 gagtggtcac agaggtcgtt atgatctatg atgccgagaa gcagcggcct cgaggttttg
      601 gatttattac tttcgaggac gaacaatcag tggaccaggc tgtcaacatg cattttcacg
      661 acatcatggg caaaaaagtg gaggttaaac gggctgaacc tcgggacagc aaaaaccaag
      721 caccaggaca gccaggagcc agccagtggg gcagccgcgt ggcgcccagt gcagccaacg
      781 gctgggcggg ccagcccccg ccaacgtggc aacaaggata tggcccacaa ggaatgtggg
      841 tgccagcagg acaggccatt ggtggctatg gcccaccccc tgcgggcaga ggagccccgc
      901 ccccgccccc acccttcacc tcctacattg tgtccacacc tcctggaggc ttccccccac
      961 cacagggctt cccacagggc tacggcgctc caccacagtt cagttttggc tacggtcctc
     1021 cgcccccacc ccctgatcag ttcgcccctc caggggtccc tcctccacct gccaccccag
     1081 gggctgcccc actggccttc ccaccacctc cgtctcaggc tgccccagac atgagcaaac
     1141 ccccaacagc ccagccggac ttcccctatg gtcaatatgg ttacgggcag gacttgagcg
     1201 gcttcggcca gggcttctca gaccccagcc agcagccgcc ctcctatggg ggcccctctg
     1261 tgccgggctc agggggtccc cccgctggtg gcagtggctt cggacgtggg cagaaccaca
     1321 acgtgcaggg cttccatccc tacaggcgct agccaggggg acggcagcag ggcaggattt
     1381 gggactggtg aactcgtgac aatcacacac tcgctcggga caaaataaat gaccactcga
     1441 cctggggggg aggggcagcg aaggccgcgt ctggactgag gttttaaata tatttctttt
     1501 ctctgaccca tcagcacaat aaaaacacgt cactggttca acaaaaaaaa aaaaaaaaaa
     1561 aaaaaaaaaa aaaa
//
