LOCUS       XM_006256108            2807 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus death-domain associated protein
            (Daxx), transcript variant X7, mRNA.
ACCESSION   XM_006256108
VERSION     XM_006256108.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006256108.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006256108.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2807
                     /gene="Daxx"
                     /note="death-domain associated protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 ESTs, 3 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     103 samples with support for all annotated introns"
                     /db_xref="GeneID:140926"
                     /db_xref="RGD:621227"
     CDS             299..2515
                     /gene="Daxx"
                     /codon_start=1
                     /product="death domain-associated protein 6 isoform X1"
                     /protein_id="XP_006256170.1"
                     /db_xref="GeneID:140926"
                     /db_xref="RGD:621227"
                     /translation="MATDDSIIVLDDDDEDEAAAQPGPSNPASNPVSPGPEASGPSES
                     HGDGGSSNSGSRKCYKLENEKLFEEFLELCKMQTSDHPEVVPFLHKLQQRAQSAFLAS
                     AEFRNILSRVLSRSRNRPAKLYVYINELCTVLKAHSIKKKLNLAPAASAESSGDNPPT
                     DPPSDLTNTETTASEASRTRGSRRQIQRLEQLLALYVAEIQRLQEKELDLSELDDPDS
                     SYLQEARLKRKLIRLFGRLCELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKP
                     GPDTFPDYGDVLRAVEKAATRHSLGLPRQQLQLLAQDAFRDVGVRLQERRHLDLIYNF
                     GCHLTDDYRPGVDPALTDPTLARRLRENRTLAMSRLDEVISKYAMMQDKSEEGERQKR
                     RARLLATSQSSDLPKASSDSGEGPSGVASQEDPTTPKAETEDEEDDEESDDEEEEEEE
                     EEEEATEDEDEDLEQLQEDQDDEEEEEGDNEDDKSPTSPSPIFRRRNSAPTEGLRSPE
                     EQQERGLTGTPASPLEASPGLPSTDAESSGEQLQERLLAGESPVSQLSELDMEALPEE
                     TIPSPEERGISSSRRKSDSSLPTILENGAAMVTSTSFNGRVSSHPCRDASPPSKRFRK
                     EKKQLGPGPLENSYVKKQTMAQQDSGWKISVLSTPSSPLASVGPVADSSTRVDSPSHE
                     LVTSSLCNPSPSLILQTPQSQSPRPCIYKGLYVSDCSRTLYITRLAPVSEMPASAS"
ORIGIN      
        1 tgggagggca ggtctggggc aggaagtttc tgattggccg agtggctttg gcaagctcct
       61 ggtgcaaaga gctccacgcc tcgcggagct ggctggtgcc gtacggcaac gtggcgcgcc
      121 ccatctacct ggtcccaggc cccgcccccc tgagtgtcag tgcacccgga gcggcggcct
      181 aggtgggcgg gccacgcgtc acttccggtc ccaagaagcc taggtcccgt acagcaatat
      241 ggccgccctc aggtgctgca ggcggaaact ccgcgccttc cgggggattt gatcccccat
      301 ggccaccgat gacagcatca ttgtgcttga cgatgatgat gaagatgaag cagctgctca
      361 gccaggaccc tccaacccag cctctaatcc tgtctcacca ggaccagaag cctctggtcc
      421 ctctgagtcc catggggatg gagggagcag taactcaggt agcaggaagt gctacaagtt
      481 ggagaatgag aagctgtttg aagagttcct tgaactgtgt aagatgcaga catcggacca
      541 ccctgaggtg gttccgttcc tccacaaact gcagcagcgt gctcagtccg cttttctggc
      601 ctctgcagag ttccgcaaca tcctctccag ggttctgtct cggtctcgga accggccagc
      661 gaagctctac gtctacatta acgagctctg cactgtcctt aaagctcatt ccatcaagaa
      721 gaagttgaac ttagctcccg cagcctcagc ggaatcatcg ggtgataacc ctcccacaga
      781 tcccccgtct gaccttacaa acaccgaaac cactgcctct gaggcctcaa ggactcgagg
      841 ctcccggagg cagatccagc gcttggagca gctgctggca ctgtatgtcg cagagataca
      901 gcggctgcag gaaaaggagt tggatctgtc agaactggat gatcccgact cctcctattt
      961 gcaggaggcc cgcttgaagc ggaaactgat ccgcctcttt gggcggctgt gcgagttgaa
     1021 ggactgctct tctctgactg ggagggtcat agagcagcga attccttacc gaggcactcg
     1081 atacccagag gtcaacaggc gcatcgagcg gctcatcaac aagccggggc ctgacacgtt
     1141 tccggactat ggagatgtgc tgagagcggt ggagaaggcg gcgacccggc acagtctggg
     1201 ccttcccaga cagcagcttc agctcctggc tcaggatgcc ttccgggatg tgggtgtcag
     1261 gttacaggag cgccgccacc tggatctcat ctataacttt ggctgccacc tcacagatga
     1321 ctataggcca ggcgttgacc ccgcactcac cgatcccaca ttggctcgcc gccttcggga
     1381 gaatcgaacc ttggccatga gccggctgga tgaggtcatc tccaagtatg ccatgatgca
     1441 agacaagagt gaggaggggg agagacagaa gagacgggcc cggctcttag ccacttccca
     1501 atcttcagac ctccccaaag cctcctcgga ttccggtgag ggtcctagtg gagtggcatc
     1561 ccaggaggac cctactaccc ccaaggctga gaccgaggat gaggaagacg atgaggaaag
     1621 tgatgatgaa gaggaggaag aggaagagga ggaggaggag gccaccgaag atgaagatga
     1681 ggatttagaa cagttgcagg aggatcagga tgatgaagag gaggaggaag gagataatga
     1741 agacgataaa agtcccacat ccccttcgcc cattttccgc agaaggaact cagcacccac
     1801 agaagggctc aggtccccgg aggagcagca ggagagagga ctgacgggga cgccagcatc
     1861 cccgctggaa gcatccccgg gccttcccag caccgatgct gaaagcagcg gcgagcagct
     1921 ccaggagcgg ctcctggcag gagagagtcc cgtgtcccag ctttctgagc tagacatgga
     1981 agctctgcct gaggagacca tcccttcccc tgaggaaagg ggcatttcct cttccaggag
     2041 aaagtcagac agttccctcc ccaccatctt ggaaaatggg gcagctatgg ttacctctac
     2101 gtccttcaat gggcgtgtct cttctcaccc ttgtcgagat gccagtcccc caagcaagag
     2161 atttcggaag gaaaagaagc aactgggacc tgggccgtta gaaaacagct atgtaaaaaa
     2221 gcagacgatg gcacagcagg acagtgggtg gaagataagt gtcctgtcta ctccgtcctc
     2281 ccccttggcc tctgtgggtc ctgttgctga ttcctccacg agggtggact ctcccagcca
     2341 tgagctggta accagctccc tgtgcaaccc ttctccatcc ctgatactcc agactcccca
     2401 gtctcagtct ccccggcctt gtatttataa gggtctctat gtatccgact gttccagaac
     2461 tctgtatata acaaggctgg ccccagtctc agagatgcct gcctctgcct cctgagtgct
     2521 ggaactaaag gcgtgggcca tcatgcctgg ttcacccttc cttctctcct gacttgtctg
     2581 cagacgagtg tggccaccca gtgcgatccc gaggagatca tcgtgctctc agactctgat
     2641 tagcagtccc tgcatccaga agggtttcta atggctgtta gaagatgacg gagcaaatga
     2701 tggacagagc tcctcccgtt ttggtggtgt ttcttttgac aaaaaatcag atgttttaag
     2761 ttttacacag acacattaat aaacaatgaa tttcttttct tattgta
//
