LOCUS       XM_006256106            2631 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus death-domain associated protein
            (Daxx), transcript variant X6, mRNA.
ACCESSION   XM_006256106
VERSION     XM_006256106.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006256106.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006256106.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2631
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2631
                     /gene="Daxx"
                     /note="death-domain associated protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 3 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     136 samples with support for all annotated introns"
                     /db_xref="GeneID:140926"
                     /db_xref="RGD:621227"
     CDS             123..2339
                     /gene="Daxx"
                     /codon_start=1
                     /product="death domain-associated protein 6 isoform X1"
                     /protein_id="XP_006256168.1"
                     /db_xref="GeneID:140926"
                     /db_xref="RGD:621227"
                     /translation="MATDDSIIVLDDDDEDEAAAQPGPSNPASNPVSPGPEASGPSES
                     HGDGGSSNSGSRKCYKLENEKLFEEFLELCKMQTSDHPEVVPFLHKLQQRAQSAFLAS
                     AEFRNILSRVLSRSRNRPAKLYVYINELCTVLKAHSIKKKLNLAPAASAESSGDNPPT
                     DPPSDLTNTETTASEASRTRGSRRQIQRLEQLLALYVAEIQRLQEKELDLSELDDPDS
                     SYLQEARLKRKLIRLFGRLCELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKP
                     GPDTFPDYGDVLRAVEKAATRHSLGLPRQQLQLLAQDAFRDVGVRLQERRHLDLIYNF
                     GCHLTDDYRPGVDPALTDPTLARRLRENRTLAMSRLDEVISKYAMMQDKSEEGERQKR
                     RARLLATSQSSDLPKASSDSGEGPSGVASQEDPTTPKAETEDEEDDEESDDEEEEEEE
                     EEEEATEDEDEDLEQLQEDQDDEEEEEGDNEDDKSPTSPSPIFRRRNSAPTEGLRSPE
                     EQQERGLTGTPASPLEASPGLPSTDAESSGEQLQERLLAGESPVSQLSELDMEALPEE
                     TIPSPEERGISSSRRKSDSSLPTILENGAAMVTSTSFNGRVSSHPCRDASPPSKRFRK
                     EKKQLGPGPLENSYVKKQTMAQQDSGWKISVLSTPSSPLASVGPVADSSTRVDSPSHE
                     LVTSSLCNPSPSLILQTPQSQSPRPCIYKGLYVSDCSRTLYITRLAPVSEMPASAS"
ORIGIN      
        1 ggtctgttgt agggcctgag gtgggggtgg gggaaaggaa ggcggaggga actttgcgag
       61 gatttgtgat ccgcgctgag gggagcctcg agagaccgtt tctgaggggg atttgatccc
      121 ccatggccac cgatgacagc atcattgtgc ttgacgatga tgatgaagat gaagcagctg
      181 ctcagccagg accctccaac ccagcctcta atcctgtctc accaggacca gaagcctctg
      241 gtccctctga gtcccatggg gatggaggga gcagtaactc aggtagcagg aagtgctaca
      301 agttggagaa tgagaagctg tttgaagagt tccttgaact gtgtaagatg cagacatcgg
      361 accaccctga ggtggttccg ttcctccaca aactgcagca gcgtgctcag tccgcttttc
      421 tggcctctgc agagttccgc aacatcctct ccagggttct gtctcggtct cggaaccggc
      481 cagcgaagct ctacgtctac attaacgagc tctgcactgt ccttaaagct cattccatca
      541 agaagaagtt gaacttagct cccgcagcct cagcggaatc atcgggtgat aaccctccca
      601 cagatccccc gtctgacctt acaaacaccg aaaccactgc ctctgaggcc tcaaggactc
      661 gaggctcccg gaggcagatc cagcgcttgg agcagctgct ggcactgtat gtcgcagaga
      721 tacagcggct gcaggaaaag gagttggatc tgtcagaact ggatgatccc gactcctcct
      781 atttgcagga ggcccgcttg aagcggaaac tgatccgcct ctttgggcgg ctgtgcgagt
      841 tgaaggactg ctcttctctg actgggaggg tcatagagca gcgaattcct taccgaggca
      901 ctcgataccc agaggtcaac aggcgcatcg agcggctcat caacaagccg gggcctgaca
      961 cgtttccgga ctatggagat gtgctgagag cggtggagaa ggcggcgacc cggcacagtc
     1021 tgggccttcc cagacagcag cttcagctcc tggctcagga tgccttccgg gatgtgggtg
     1081 tcaggttaca ggagcgccgc cacctggatc tcatctataa ctttggctgc cacctcacag
     1141 atgactatag gccaggcgtt gaccccgcac tcaccgatcc cacattggct cgccgccttc
     1201 gggagaatcg aaccttggcc atgagccggc tggatgaggt catctccaag tatgccatga
     1261 tgcaagacaa gagtgaggag ggggagagac agaagagacg ggcccggctc ttagccactt
     1321 cccaatcttc agacctcccc aaagcctcct cggattccgg tgagggtcct agtggagtgg
     1381 catcccagga ggaccctact acccccaagg ctgagaccga ggatgaggaa gacgatgagg
     1441 aaagtgatga tgaagaggag gaagaggaag aggaggagga ggaggccacc gaagatgaag
     1501 atgaggattt agaacagttg caggaggatc aggatgatga agaggaggag gaaggagata
     1561 atgaagacga taaaagtccc acatcccctt cgcccatttt ccgcagaagg aactcagcac
     1621 ccacagaagg gctcaggtcc ccggaggagc agcaggagag aggactgacg gggacgccag
     1681 catccccgct ggaagcatcc ccgggccttc ccagcaccga tgctgaaagc agcggcgagc
     1741 agctccagga gcggctcctg gcaggagaga gtcccgtgtc ccagctttct gagctagaca
     1801 tggaagctct gcctgaggag accatccctt cccctgagga aaggggcatt tcctcttcca
     1861 ggagaaagtc agacagttcc ctccccacca tcttggaaaa tggggcagct atggttacct
     1921 ctacgtcctt caatgggcgt gtctcttctc acccttgtcg agatgccagt cccccaagca
     1981 agagatttcg gaaggaaaag aagcaactgg gacctgggcc gttagaaaac agctatgtaa
     2041 aaaagcagac gatggcacag caggacagtg ggtggaagat aagtgtcctg tctactccgt
     2101 cctccccctt ggcctctgtg ggtcctgttg ctgattcctc cacgagggtg gactctccca
     2161 gccatgagct ggtaaccagc tccctgtgca acccttctcc atccctgata ctccagactc
     2221 cccagtctca gtctccccgg ccttgtattt ataagggtct ctatgtatcc gactgttcca
     2281 gaactctgta tataacaagg ctggccccag tctcagagat gcctgcctct gcctcctgag
     2341 tgctggaact aaaggcgtgg gccatcatgc ctggttcacc cttccttctc tcctgacttg
     2401 tctgcagacg agtgtggcca cccagtgcga tcccgaggag atcatcgtgc tctcagactc
     2461 tgattagcag tccctgcatc cagaagggtt tctaatggct gttagaagat gacggagcaa
     2521 atgatggaca gagctcctcc cgttttggtg gtgtttcttt tgacaaaaaa tcagatgttt
     2581 taagttttac acagacacat taataaacaa tgaatttctt ttcttattgt a
//
