LOCUS       XM_006256104            3057 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus death-domain associated protein
            (Daxx), transcript variant X2, mRNA.
ACCESSION   XM_006256104
VERSION     XM_006256104.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006256104.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3057
                     /gene="Daxx"
                     /note="death-domain associated protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 ESTs, 3 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     70 samples with support for all annotated introns"
                     /db_xref="GeneID:140926"
                     /db_xref="RGD:621227"
     CDS             549..2765
                     /gene="Daxx"
                     /codon_start=1
                     /product="death domain-associated protein 6 isoform X1"
                     /protein_id="XP_006256166.1"
                     /db_xref="GeneID:140926"
                     /db_xref="RGD:621227"
                     /translation="MATDDSIIVLDDDDEDEAAAQPGPSNPASNPVSPGPEASGPSES
                     HGDGGSSNSGSRKCYKLENEKLFEEFLELCKMQTSDHPEVVPFLHKLQQRAQSAFLAS
                     AEFRNILSRVLSRSRNRPAKLYVYINELCTVLKAHSIKKKLNLAPAASAESSGDNPPT
                     DPPSDLTNTETTASEASRTRGSRRQIQRLEQLLALYVAEIQRLQEKELDLSELDDPDS
                     SYLQEARLKRKLIRLFGRLCELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKP
                     GPDTFPDYGDVLRAVEKAATRHSLGLPRQQLQLLAQDAFRDVGVRLQERRHLDLIYNF
                     GCHLTDDYRPGVDPALTDPTLARRLRENRTLAMSRLDEVISKYAMMQDKSEEGERQKR
                     RARLLATSQSSDLPKASSDSGEGPSGVASQEDPTTPKAETEDEEDDEESDDEEEEEEE
                     EEEEATEDEDEDLEQLQEDQDDEEEEEGDNEDDKSPTSPSPIFRRRNSAPTEGLRSPE
                     EQQERGLTGTPASPLEASPGLPSTDAESSGEQLQERLLAGESPVSQLSELDMEALPEE
                     TIPSPEERGISSSRRKSDSSLPTILENGAAMVTSTSFNGRVSSHPCRDASPPSKRFRK
                     EKKQLGPGPLENSYVKKQTMAQQDSGWKISVLSTPSSPLASVGPVADSSTRVDSPSHE
                     LVTSSLCNPSPSLILQTPQSQSPRPCIYKGLYVSDCSRTLYITRLAPVSEMPASAS"
ORIGIN      
        1 ggcctgaggt gggggtgggg gaaaggaagg cggagggaac tttgcgagga tttgtgatcc
       61 gcgctgaggg gagcctcgag agaccgtttc tgaggtgggg gccaggtcgt tcgtggagcc
      121 ggggtggcgg cgcaggagtt ggcgaaggcg aaggatccgc acggcctggc tgcggagtct
      181 gaggggcgag cttgtatgac ggagagagca gtgtgggatc ttatacccca tcggattggg
      241 agtaggaaga aaaaactcac cagctgacaa gagagtgggg aaaacgcaac cgaaagacag
      301 gaaattgact gggggctgaa atttgggact tgagacgatc gatggggagg ttccccttca
      361 gaactgcctg agactgatag ttgcaaaaga caggctttga agacatctca gaaaggacga
      421 ggctattgtg aaccctgagg tatctgactg agtgggacta aggaggaggg gcttttcctg
      481 agtcaccctt tcccttccag aattctgacc tttcaaatac tttttccctc agggggattt
      541 gatcccccat ggccaccgat gacagcatca ttgtgcttga cgatgatgat gaagatgaag
      601 cagctgctca gccaggaccc tccaacccag cctctaatcc tgtctcacca ggaccagaag
      661 cctctggtcc ctctgagtcc catggggatg gagggagcag taactcaggt agcaggaagt
      721 gctacaagtt ggagaatgag aagctgtttg aagagttcct tgaactgtgt aagatgcaga
      781 catcggacca ccctgaggtg gttccgttcc tccacaaact gcagcagcgt gctcagtccg
      841 cttttctggc ctctgcagag ttccgcaaca tcctctccag ggttctgtct cggtctcgga
      901 accggccagc gaagctctac gtctacatta acgagctctg cactgtcctt aaagctcatt
      961 ccatcaagaa gaagttgaac ttagctcccg cagcctcagc ggaatcatcg ggtgataacc
     1021 ctcccacaga tcccccgtct gaccttacaa acaccgaaac cactgcctct gaggcctcaa
     1081 ggactcgagg ctcccggagg cagatccagc gcttggagca gctgctggca ctgtatgtcg
     1141 cagagataca gcggctgcag gaaaaggagt tggatctgtc agaactggat gatcccgact
     1201 cctcctattt gcaggaggcc cgcttgaagc ggaaactgat ccgcctcttt gggcggctgt
     1261 gcgagttgaa ggactgctct tctctgactg ggagggtcat agagcagcga attccttacc
     1321 gaggcactcg atacccagag gtcaacaggc gcatcgagcg gctcatcaac aagccggggc
     1381 ctgacacgtt tccggactat ggagatgtgc tgagagcggt ggagaaggcg gcgacccggc
     1441 acagtctggg ccttcccaga cagcagcttc agctcctggc tcaggatgcc ttccgggatg
     1501 tgggtgtcag gttacaggag cgccgccacc tggatctcat ctataacttt ggctgccacc
     1561 tcacagatga ctataggcca ggcgttgacc ccgcactcac cgatcccaca ttggctcgcc
     1621 gccttcggga gaatcgaacc ttggccatga gccggctgga tgaggtcatc tccaagtatg
     1681 ccatgatgca agacaagagt gaggaggggg agagacagaa gagacgggcc cggctcttag
     1741 ccacttccca atcttcagac ctccccaaag cctcctcgga ttccggtgag ggtcctagtg
     1801 gagtggcatc ccaggaggac cctactaccc ccaaggctga gaccgaggat gaggaagacg
     1861 atgaggaaag tgatgatgaa gaggaggaag aggaagagga ggaggaggag gccaccgaag
     1921 atgaagatga ggatttagaa cagttgcagg aggatcagga tgatgaagag gaggaggaag
     1981 gagataatga agacgataaa agtcccacat ccccttcgcc cattttccgc agaaggaact
     2041 cagcacccac agaagggctc aggtccccgg aggagcagca ggagagagga ctgacgggga
     2101 cgccagcatc cccgctggaa gcatccccgg gccttcccag caccgatgct gaaagcagcg
     2161 gcgagcagct ccaggagcgg ctcctggcag gagagagtcc cgtgtcccag ctttctgagc
     2221 tagacatgga agctctgcct gaggagacca tcccttcccc tgaggaaagg ggcatttcct
     2281 cttccaggag aaagtcagac agttccctcc ccaccatctt ggaaaatggg gcagctatgg
     2341 ttacctctac gtccttcaat gggcgtgtct cttctcaccc ttgtcgagat gccagtcccc
     2401 caagcaagag atttcggaag gaaaagaagc aactgggacc tgggccgtta gaaaacagct
     2461 atgtaaaaaa gcagacgatg gcacagcagg acagtgggtg gaagataagt gtcctgtcta
     2521 ctccgtcctc ccccttggcc tctgtgggtc ctgttgctga ttcctccacg agggtggact
     2581 ctcccagcca tgagctggta accagctccc tgtgcaaccc ttctccatcc ctgatactcc
     2641 agactcccca gtctcagtct ccccggcctt gtatttataa gggtctctat gtatccgact
     2701 gttccagaac tctgtatata acaaggctgg ccccagtctc agagatgcct gcctctgcct
     2761 cctgagtgct ggaactaaag gcgtgggcca tcatgcctgg ttcacccttc cttctctcct
     2821 gacttgtctg cagacgagtg tggccaccca gtgcgatccc gaggagatca tcgtgctctc
     2881 agactctgat tagcagtccc tgcatccaga agggtttcta atggctgtta gaagatgacg
     2941 gagcaaatga tggacagagc tcctcccgtt ttggtggtgt ttcttttgac aaaaaatcag
     3001 atgttttaag ttttacacag acacattaat aaacaatgaa tttcttttct tattgta
//
