LOCUS       XM_039084453            5874 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dishevelled associated activator of
            morphogenesis 2 (Daam2), transcript variant X7, mRNA.
ACCESSION   XM_039084453
VERSION     XM_039084453.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 1, 2024 this sequence was replaced by
            NM_001427649.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5874
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5874
                     /gene="Daam2"
                     /note="dishevelled associated activator of morphogenesis
                     2; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 19 ESTs, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 70 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:316201"
                     /db_xref="RGD:1306128"
     CDS             210..3389
                     /gene="Daam2"
                     /codon_start=1
                     /product="disheveled-associated activator of morphogenesis
                     2 isoform X3"
                     /protein_id="XP_038940381.1"
                     /db_xref="GeneID:316201"
                     /db_xref="RGD:1306128"
                     /translation="MALRKRSPHGLGFLCCFGSSDLPEIDLRDSHPLQYLEFSSPIPN
                     PEELNVCFAELVDELDLTDKNREAVFALPPEKKWQIYCSKKKEQEDPNKLATSWPEFY
                     IDRINAMATMQNLYDTEDEETDKRSQVVEDLKTALRTQPMRFVTRFIELEGLSCLLNF
                     LRGMDHATCESRIHTSLIGCIKALMNNSQGRAHVLAQPEAISIIAQSLRTENSKTKVA
                     VLEILGAVCLVPGGHKKVLQAMLHYQVYAAERTRFQTLLNELDRSLGRYRDEVNLKTA
                     IMSFINAVLNAGAGEDNLEFRLHLRYEFLMLGIQPVIDKLRQHENAILDKHLDFFEMV
                     RNEDDLELARRFDMVHIDTKSASQMFELIHKKLKHTEAYPCLLSVLHHCLQMPYKRNG
                     GYFQQWQLLDRILQQIVLQDERGVDPDLAPLENFNVKNIVNMLINENEVKQWRDQAEK
                     FRKEHMELLSRLERKERECETKTLEKEEMMRTLNKMKDKLARESQELRQARGQVAELT
                     GPVSSPPPPGGPLTLSSSTTTNDLPPPPPPLPLDNCTPPPPPPLPPGGPPIPPGAPPC
                     FSSGSPPPHEPLSSNEAPLRKKRIPQPSHPLKSFNWVKLNEERVSGTVWNEIDDSQVF
                     RILDLEDFEKMFSAYQRHQKELGSTEDIYLASRKVKELSVIDGRRAQNCIILLSKLKL
                     SNEEIRRAILRMDEQEDLAKDMLEQLLKFIPEKSDVDLLEEHKHEIERMARADRFLYE
                     MSRIDHYQQRLQALFFKKKFQERLAEAKPKVEAILLASQELTLSKRLKKMLEVVLAIG
                     NFMNKGQRGGAYGFRVASLNKIADTKSSIDRNISLLHYLIMILEKHFPDILNMPSELL
                     HLSKAAKVNLAELEKEVGALRRGLRAVEVELEYQRQQARDPNDKFVPVMSDFITVSSF
                     SFSELEEQLNEARDKFAKALAHFGEQDSKMQPDEFFGIFDTFLQAFLEARQDLEAMRR
                     RKEEDERRARMESMLKEQREKERWQRQRKVLVGGALEESGEFDDLVSALRSGEVFDKD
                     LNKFKRNRKRPGNQVAEVTRERAINRLNY"
ORIGIN      
        1 gcggggcggg cggcggcgcg aggccggccg agagggagca gcctgctttc tccggagtcc
       61 ggggcagcca aggactgagc tgagcaagcg agcgcggtgc ctgcgggaag ccggggcagc
      121 agcagcctca tcgcaccatg cgggcctcag gattgtgcca atgaggacct aaggtgcctt
      181 cctgctgacc gccccagcct gcagtgacca tggccctccg taagaggagt ccccatggcc
      241 tgggcttcct ttgctgcttc ggaagcagtg accttcctga gattgacctc cgggacagcc
      301 atccattgca gtatctggag ttctccagtc ccatcccgaa cccagaggag ctcaacgtct
      361 gcttcgcaga gctggtggat gaattggacc tcacagataa aaaccgggag gctgtgtttg
      421 cactgccacc agagaagaaa tggcagatct actgcagcaa gaagaaggag caggaggacc
      481 cgaacaagct ggcaaccagc tggcctgagt tttacattga ccgtatcaat gccatggcca
      541 cgatgcagaa cctgtatgac actgaagacg aggagacaga caagaggagc caagtcgtag
      601 aagacctgaa gacagccctc cggacacagc ccatgaggtt cgtgacccgc ttcatcgaac
      661 tggaaggcct gtcctgtctg ctgaatttcc tccggggcat ggaccatgcc acctgtgaga
      721 gccgcatcca cacgtctctc atcggctgca tcaaggctct gatgaacaac tcccagggac
      781 gggcacatgt cctggcacag cctgaggcca tcagcatcat cgcccagagc ctgcgaacag
      841 agaacagcaa gacgaaggtt gcagtgctgg agatcctggg tgcagtgtgc cttgtgcctg
      901 gaggccacaa gaaggtccta caggccatgc tacactacca ggtgtatgca gccgagcgca
      961 ctcgtttcca gactttgctg aacgaactgg atcgcagttt gggccggtac cgggatgagg
     1021 tcaacctgaa gacagccatc atgtccttca tcaatgctgt cctcaatgct ggtgctggag
     1081 aggataacct ggaattccgc ctccatctcc ggtatgagtt cctgatgctg ggaatccagc
     1141 cagtgattga taaactccgg caacacgaga atgccatcct ggacaagcat ttggacttct
     1201 ttgagatggt ccggaatgag gatgacctgg agctagcccg gaggtttgac atggtccaca
     1261 ttgacacaaa gagtgcctcc cagatgtttg agctgatcca caagaagctg aagcacacgg
     1321 aagcctaccc ctgcctgctc tccgtcctgc accactgcct gcagatgcct tacaagcgga
     1381 acggtggcta cttccagcag tggcagctcc tggaccgcat ccttcagcag atcgtcctcc
     1441 aggatgagcg aggtgtggac cctgacctgg ccccactgga aaactttaat gtcaagaaca
     1501 tcgtcaacat gctcatcaat gagaacgagg tgaagcagtg gcgagaccaa gcagagaagt
     1561 tccggaaaga acacatggag ctcctgagcc ggctggagag aaaagagcgg gaatgtgaga
     1621 cgaagacact ggagaaggaa gagatgatgc ggacgctcaa caagatgaag gacaagctgg
     1681 cccgagagtc gcaggagctg cgccaagcta ggggacaagt ggcagagctg accggcccag
     1741 tgtcttcccc ccctccccct ggaggtccgc tcaccttatc ttcctccaca acaaccaacg
     1801 atctgcctcc acccccgcct cctctccccc ttgacaactg cacaccccca cccccaccac
     1861 ccctccctcc cggaggacct cccatccccc caggtgcccc accctgcttc agctcaggct
     1921 cgcccccacc tcatgaaccc ctctccagca atgaagcccc actcaggaaa aagcgcatcc
     1981 cccagccttc acacccattg aagtccttca actgggtcaa gctgaatgag gagcgtgtct
     2041 ccggcaccgt gtggaatgag attgatgact cgcaggtgtt tcggattctg gacctggaag
     2101 attttgaaaa aatgttctcg gcatatcaga ggcaccagaa agaactgggc tccacagagg
     2161 acatctacct agcctcccgc aaggttaaag agctgtccgt catcgatggc cggagggccc
     2221 agaattgtat cattcttctc tccaagttga agctttctaa tgaggagata cgacgggcca
     2281 tcttgaggat ggatgaacag gaagacctcg ctaaggacat gctggagcag ctcctcaagt
     2341 tcatcccgga gaagagcgac gttgacctcc tggaagagca caagcatgag attgagcgga
     2401 tggcacgtgc agaccgcttc ctctatgaaa tgagcaggat cgaccattac cagcagcggc
     2461 tacaggccct ctttttcaag aagaagttcc aggaacggct ggctgaggcc aagcccaaag
     2521 tagaagccat cctgctggcc tcccaggagc tgaccctcag caagcgtctg aagaaaatgc
     2581 tggaggtggt cctagccatc ggcaacttca tgaacaaggg tcagcgtggg ggtgcctatg
     2641 ggttccgggt agccagcctc aacaagattg ctgacaccaa gtctagcatt gacaggaaca
     2701 tctctctact tcattacctg atcatgatcc tggagaagca cttcccggat atcctgaaca
     2761 tgccctcaga gctgctgcat ctatccaagg ccgccaaggt caacctggca gagctggaga
     2821 aggaggtggg cgctctcagg aggggcctcc gagcagtgga ggtggagttg gaatatcaga
     2881 gacagcaggc acgggacccc aatgacaagt tcgtccctgt catgagtgac ttcatcaccg
     2941 tgtctagctt cagcttctcc gagctggagg agcagttgaa tgaggccagg gataagttcg
     3001 ccaaggcact ggcacacttt ggagaacagg acagtaagat gcagccggat gaattctttg
     3061 gcatcttcga caccttcttg caggccttct tggaggcccg gcaggacctg gaggccatga
     3121 ggaggaggaa ggaggaagat gagcggaggg cacgaatgga atccatgttg aaggaacagc
     3181 gtgagaaaga aagatggcag aggcagcgga aagtcttggt tggaggcgcc ctggaggaga
     3241 gcggcgagtt cgatgaccta gtgtcagcct tgcgctctgg agaagttttc gacaaggact
     3301 taaacaagtt caagcgcaac cggaagcgac ctggaaacca ggtcgcagag gtcacccgcg
     3361 agcgggcaat aaacaggcta aattattgac tttgggactg gggactcacc acatagcagc
     3421 aagcctggag acagggatta ggggagagga gttgaataga agaagcagtg acttctaatg
     3481 acttaagtga tttggaaaac tgggtttggg agccctgggc tgggtcctgg gggcagtgtg
     3541 cggttagacc gggggtctcc ccgcactgac agaggctctt ctcttgtctc tgtatattat
     3601 ccattctcgt ccatgttctg cccacccatg ttctgtccat ctccctgtgt gcccctcccc
     3661 ctcctggcca tcattctcta agactagctt gggcatccct ggcaggccct cgcaggctgg
     3721 gtgacacttc tccagacctc acgctggcac agagctgttt aaaacccagg agacattcct
     3781 gtcccgacct tttgtacagt atgtggtggt ggaggggacc ccaagagcta gcagtaggga
     3841 cttgaggctc ctatctgaag agacagctca acaaaacgtg gatctgggat gggaaccagg
     3901 aggtttgtgt gttctagcta gataaactcc agtatgttcc tgacaaacgg gaccagagtc
     3961 agcaagtgag ttatctgtct gcaccttttg cctacaccaa gtcctggggc ctcgattctt
     4021 ccctggccac ctccatccca cttactaatt tctggccccc aaattcatct ccagtttcca
     4081 gaactctgcc tcaccatcag cttatagtga ggttctggtg agaaggggtg tccaaggaag
     4141 actcctgtca tcacctcacc agactcaggc atagaccctg aagcaaaccc taaggtgact
     4201 tgaccactgt cttggagagc ctgacctcag gtccccacca gaaggtagca ctcaaatgct
     4261 tcgctcccct cagttgactc tcgatgtgcc acaatggcct cccagtctcc acctgcaggg
     4321 tcacatggcg ctccatatac ttggctgcag ctggccttgg ggaattgttc ttgaggacta
     4381 gaactactct ctatatttaa ctgtcactct gagggagaca attagactgg gggctgagaa
     4441 gagcaggcag gagacgcccg ggagatgagg gaacgcttac gtacattcct ttggttcctc
     4501 agcctgactg catgggatca ctctggccct ccgtccacac tcaccatgta tcctgtccat
     4561 ccgtctccag ccattttgat ggtattggtg gggtggcact gctataccta ggcaaatgtt
     4621 ctaaatgagg tcaaccccgt gtaggcttat caaatgcact ggtctcctct catctagagc
     4681 tcgatcttgc ctgattacca tccgccagct cctggctctt ctcctctaac accccggctc
     4741 agggtcattg ctagtgaccg tgggctgccc agtcctggtc ctgtcactgc ctgccttcct
     4801 acaggagatt cccagggagt ggggccataa tgttgtgggg aggagagatg caggctaagc
     4861 tgggtgtgtg cattggtttg aaagggatct cagcaaatgg aggcctggcc agtacggtat
     4921 gaagccagcg tcagagcaca gaaggcttct acggagacta gctatgagga gagctttaat
     4981 gctcactggt acacccaaag actccttacc cccctcagaa agcaagctat gaggacatta
     5041 aagctggtgc tggacatctt catatcctct cccaaactgg ctgggagtcc agcctgccaa
     5101 gtgagggcag gggacaggga tggactacac tgccgcccga caggcatggc cgggcctagc
     5161 cttcccaacc accatgaaga caggacatgc accaggagaa agaaggaaga tagacgtcga
     5221 tgaagagaca cattggctct tcagaaaagc tgcctggcat ctctccagag cccagccttc
     5281 ttgccccaaa gaattctgcc ttctctattt attattttct gtggctgcct agtggttcca
     5341 gtgctgtgtg tctttgttaa ctagtccaac agtgcctagg acctcggacc attacaggtg
     5401 acttagcagg aagtgactgg tgcccagtgg aggtggatag gctggtcctc gacgttaaat
     5461 ggtgaagtct actccccagc acccatccaa ccctctggcc gcctgtgggc caactgctcc
     5521 agttagtttt gtgcacatgt aaacttcata gtccagccaa cacatccctt ctcagcagcg
     5581 gcaattcccc tcccaagaag gaagtttgtt caggggttgg aaggacagag ctctccaggt
     5641 gggtggatat aggcatgggt tcttcccatc cactcctatt gcccccacct ggggagctgt
     5701 gaccacctcc ccaggacatc ggccaacctt catgccaagg ctgctctcac cagctgctgc
     5761 aggagacaaa caaggttcat atgtacaaaa ctctacggtg tcctttttac ctgcaccctt
     5821 ttataagaat atattgtaat actaaaaaaa atattaaatt cctccccacc ccta
//
