LOCUS       XM_039084449            6576 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dishevelled associated activator of
            morphogenesis 2 (Daam2), transcript variant X3, mRNA.
ACCESSION   XM_039084449
VERSION     XM_039084449.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084449.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6576
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6576
                     /gene="Daam2"
                     /note="dishevelled associated activator of morphogenesis
                     2; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 ESTs, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 11 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:316201"
                     /db_xref="RGD:1306128"
     CDS             768..4091
                     /gene="Daam2"
                     /codon_start=1
                     /product="disheveled-associated activator of morphogenesis
                     2 isoform X1"
                     /protein_id="XP_038940377.1"
                     /db_xref="GeneID:316201"
                     /db_xref="RGD:1306128"
                     /translation="MALRKRSPHGLGFLCCFGSSDLPEIDLRDSHPLQYLEFSSPIPN
                     PEELNVCFAELVDELDLTDKNREAVFALPPEKKWQIYCSKKKEQEDPNKLATSWPEFY
                     IDRINAMATMQNLYDTEDEETDKRSQVVEDLKTALRTQPMRFVTRFIELEGLSCLLNF
                     LRGMDHATCESRIHTSLIGCIKALMNNSQGRAHVLAQPEAISIIAQSLRTENSKTKVA
                     VLEILGAVCLVPGGHKKVLQAMLHYQVYAAERTRFQTLLNELDRSLGRYRDEVNLKTA
                     IMSFINAVLNAGAGEDNLEFRLHLRYEFLMLGIQPVIDKLRQHENAILDKHLDFFEMV
                     RNEDDLELARRFDMVHIDTKSASQMFELIHKKLKHTEAYPCLLSVLHHCLQMPYKRNG
                     GYFQQWQLLDRILQQIVLQDERGVDPDLAPLENFNVKNIVNMLINENEVKQWRDQAEK
                     FRKEHMELLSRLERKERECETKTLEKEEMMRTLNKMKDKLARESQELRQARGQVAELT
                     GPVSSPPPPGGPLTLSSSTTTNDLPPPPPPLPLDNCTPPPPPPLPPGGPPIPPGAPPC
                     FSSGSPPPHEPLSSNEAPLRKKRIPQPSHPLKSFNWVKLNEERVSGTVWNEIDDSQVF
                     RILDLEDFEKMFSAYQRHQGCMQEGAQRERGNVRDGGTASRSLPAAETNDHRTEKASR
                     SMVSATGVKKELGSTEDIYLASRKVKELSVIDGRRAQNCIILLSKLKLSNEEIRRAIL
                     RMDEQEDLAKDMLEQLLKFIPEKSDVDLLEEHKHEIERMARADRFLYEMSRIDHYQQR
                     LQALFFKKKFQERLAEAKPKVEAILLASQELTLSKRLKKMLEVVLAIGNFMNKGQRGG
                     AYGFRVASLNKIADTKSSIDRNISLLHYLIMILEKHFPDILNMPSELLHLSKAAKVNL
                     AELEKEVGALRRGLRAVEVELEYQRQQARDPNDKFVPVMSDFITVSSFSFSELEEQLN
                     EARDKFAKALAHFGEQDSKMQPDEFFGIFDTFLQAFLEARQDLEAMRRRKEEDERRAR
                     MESMLKEQREKERWQRQRKVLVGGALEESGEFDDLVSALRSGEVFDKDLNKFKRNRKR
                     PGNQVAEVTRERAINRLNY"
ORIGIN      
        1 gactttgttc tgggctgtca ccttgccctc tgggcgagtc cctgcactaa agctgcccca
       61 gacaaaggga ccaaagggac catctacctc catgtcctgt gagtctggag ggttgagaag
      121 cttctcgccc tcagaactag gctcctctcc agtgtgtgtg gggactgagg gctggtgctg
      181 tctcagtact ttaccctgaa gaacactgtc tcatctccct tcactctttc tctccttcct
      241 ttcttccttc ccttcccttc tttctcttcc ttttcttgac tttccctctt atttctttcc
      301 cagtccttct tttcttattt ccttcccctc actccccttc tcttttcctg acttcccctc
      361 cccctcttcc tttcccttcc ttcctttatt ccctgtgtct tgctaatccg gactgtctct
      421 ttaagagagg cagcctgtga tctattcact ctgggactct gacagccagt tctgcttctc
      481 ctggtgggtt ctgctggact atgattggga ccctcctgag ctcaatcggg gtccagagta
      541 tagaggaaag gggtcacttc tgatgatctg cacacccctg ggggatctgt gcccacagga
      601 ctccctgcct gaagcctctt ggtagctggg ccctggcttt gggccataag aggctccttg
      661 aggtccggga gctggaaaaa ggaagttgga aagtaactgg atgtgtttga ttgtgccaat
      721 gaggacctaa ggtgccttcc tgctgaccgc cccagcctgc agtgaccatg gccctccgta
      781 agaggagtcc ccatggcctg ggcttccttt gctgcttcgg aagcagtgac cttcctgaga
      841 ttgacctccg ggacagccat ccattgcagt atctggagtt ctccagtccc atcccgaacc
      901 cagaggagct caacgtctgc ttcgcagagc tggtggatga attggacctc acagataaaa
      961 accgggaggc tgtgtttgca ctgccaccag agaagaaatg gcagatctac tgcagcaaga
     1021 agaaggagca ggaggacccg aacaagctgg caaccagctg gcctgagttt tacattgacc
     1081 gtatcaatgc catggccacg atgcagaacc tgtatgacac tgaagacgag gagacagaca
     1141 agaggagcca agtcgtagaa gacctgaaga cagccctccg gacacagccc atgaggttcg
     1201 tgacccgctt catcgaactg gaaggcctgt cctgtctgct gaatttcctc cggggcatgg
     1261 accatgccac ctgtgagagc cgcatccaca cgtctctcat cggctgcatc aaggctctga
     1321 tgaacaactc ccagggacgg gcacatgtcc tggcacagcc tgaggccatc agcatcatcg
     1381 cccagagcct gcgaacagag aacagcaaga cgaaggttgc agtgctggag atcctgggtg
     1441 cagtgtgcct tgtgcctgga ggccacaaga aggtcctaca ggccatgcta cactaccagg
     1501 tgtatgcagc cgagcgcact cgtttccaga ctttgctgaa cgaactggat cgcagtttgg
     1561 gccggtaccg ggatgaggtc aacctgaaga cagccatcat gtccttcatc aatgctgtcc
     1621 tcaatgctgg tgctggagag gataacctgg aattccgcct ccatctccgg tatgagttcc
     1681 tgatgctggg aatccagcca gtgattgata aactccggca acacgagaat gccatcctgg
     1741 acaagcattt ggacttcttt gagatggtcc ggaatgagga tgacctggag ctagcccgga
     1801 ggtttgacat ggtccacatt gacacaaaga gtgcctccca gatgtttgag ctgatccaca
     1861 agaagctgaa gcacacggaa gcctacccct gcctgctctc cgtcctgcac cactgcctgc
     1921 agatgcctta caagcggaac ggtggctact tccagcagtg gcagctcctg gaccgcatcc
     1981 ttcagcagat cgtcctccag gatgagcgag gtgtggaccc tgacctggcc ccactggaaa
     2041 actttaatgt caagaacatc gtcaacatgc tcatcaatga gaacgaggtg aagcagtggc
     2101 gagaccaagc agagaagttc cggaaagaac acatggagct cctgagccgg ctggagagaa
     2161 aagagcggga atgtgagacg aagacactgg agaaggaaga gatgatgcgg acgctcaaca
     2221 agatgaagga caagctggcc cgagagtcgc aggagctgcg ccaagctagg ggacaagtgg
     2281 cagagctgac cggcccagtg tcttcccccc ctccccctgg aggtccgctc accttatctt
     2341 cctccacaac aaccaacgat ctgcctccac ccccgcctcc tctccccctt gacaactgca
     2401 cacccccacc cccaccaccc ctccctcccg gaggacctcc catcccccca ggtgccccac
     2461 cctgcttcag ctcaggctcg cccccacctc atgaacccct ctccagcaat gaagccccac
     2521 tcaggaaaaa gcgcatcccc cagccttcac acccattgaa gtccttcaac tgggtcaagc
     2581 tgaatgagga gcgtgtctcc ggcaccgtgt ggaatgagat tgatgactcg caggtgtttc
     2641 ggattctgga cctggaagat tttgaaaaaa tgttctcggc atatcagagg caccagggtt
     2701 gcatgcagga gggtgcccag agagagagag gaaatgtgag agatggaggg accgcaagca
     2761 gatctctgcc agctgccgag acgaatgacc acagaactga gaaggcttct aggtctatgg
     2821 tatcagctac aggtgtcaag aaagaactgg gctccacaga ggacatctac ctagcctccc
     2881 gcaaggttaa agagctgtcc gtcatcgatg gccggagggc ccagaattgt atcattcttc
     2941 tctccaagtt gaagctttct aatgaggaga tacgacgggc catcttgagg atggatgaac
     3001 aggaagacct cgctaaggac atgctggagc agctcctcaa gttcatcccg gagaagagcg
     3061 acgttgacct cctggaagag cacaagcatg agattgagcg gatggcacgt gcagaccgct
     3121 tcctctatga aatgagcagg atcgaccatt accagcagcg gctacaggcc ctctttttca
     3181 agaagaagtt ccaggaacgg ctggctgagg ccaagcccaa agtagaagcc atcctgctgg
     3241 cctcccagga gctgaccctc agcaagcgtc tgaagaaaat gctggaggtg gtcctagcca
     3301 tcggcaactt catgaacaag ggtcagcgtg ggggtgccta tgggttccgg gtagccagcc
     3361 tcaacaagat tgctgacacc aagtctagca ttgacaggaa catctctcta cttcattacc
     3421 tgatcatgat cctggagaag cacttcccgg atatcctgaa catgccctca gagctgctgc
     3481 atctatccaa ggccgccaag gtcaacctgg cagagctgga gaaggaggtg ggcgctctca
     3541 ggaggggcct ccgagcagtg gaggtggagt tggaatatca gagacagcag gcacgggacc
     3601 ccaatgacaa gttcgtccct gtcatgagtg acttcatcac cgtgtctagc ttcagcttct
     3661 ccgagctgga ggagcagttg aatgaggcca gggataagtt cgccaaggca ctggcacact
     3721 ttggagaaca ggacagtaag atgcagccgg atgaattctt tggcatcttc gacaccttct
     3781 tgcaggcctt cttggaggcc cggcaggacc tggaggccat gaggaggagg aaggaggaag
     3841 atgagcggag ggcacgaatg gaatccatgt tgaaggaaca gcgtgagaaa gaaagatggc
     3901 agaggcagcg gaaagtcttg gttggaggcg ccctggagga gagcggcgag ttcgatgacc
     3961 tagtgtcagc cttgcgctct ggagaagttt tcgacaagga cttaaacaag ttcaagcgca
     4021 accggaagcg acctggaaac caggtcgcag aggtcacccg cgagcgggca ataaacaggc
     4081 taaattattg actttgggac tggggactca ccacatagca gcaagcctgg agacagggat
     4141 taggggagag gagttgaata gaagaagcag tgacttctaa tgacttaagt gatttggaaa
     4201 actgggtttg ggagccctgg gctgggtcct gggggcagtg tgcggttaga ccgggggtct
     4261 ccccgcactg acagaggctc ttctcttgtc tctgtatatt atccattctc gtccatgttc
     4321 tgcccaccca tgttctgtcc atctccctgt gtgcccctcc ccctcctggc catcattctc
     4381 taagactagc ttgggcatcc ctggcaggcc ctcgcaggct gggtgacact tctccagacc
     4441 tcacgctggc acagagctgt ttaaaaccca ggagacattc ctgtcccgac cttttgtaca
     4501 gtatgtggtg gtggagggga ccccaagagc tagcagtagg gacttgaggc tcctatctga
     4561 agagacagct caacaaaacg tggatctggg atgggaacca ggaggtttgt gtgttctagc
     4621 tagataaact ccagtatgtt cctgacaaac gggaccagag tcagcaagtg agttatctgt
     4681 ctgcaccttt tgcctacacc aagtcctggg gcctcgattc ttccctggcc acctccatcc
     4741 cacttactaa tttctggccc ccaaattcat ctccagtttc cagaactctg cctcaccatc
     4801 agcttatagt gaggttctgg tgagaagggg tgtccaagga agactcctgt catcacctca
     4861 ccagactcag gcatagaccc tgaagcaaac cctaaggtga cttgaccact gtcttggaga
     4921 gcctgacctc aggtccccac cagaaggtag cactcaaatg cttcgctccc ctcagttgac
     4981 tctcgatgtg ccacaatggc ctcccagtct ccacctgcag ggtcacatgg cgctccatat
     5041 acttggctgc agctggcctt ggggaattgt tcttgaggac tagaactact ctctatattt
     5101 aactgtcact ctgagggaga caattagact gggggctgag aagagcaggc aggagacgcc
     5161 cgggagatga gggaacgctt acgtacattc ctttggttcc tcagcctgac tgcatgggat
     5221 cactctggcc ctccgtccac actcaccatg tatcctgtcc atccgtctcc agccattttg
     5281 atggtattgg tggggtggca ctgctatacc taggcaaatg ttctaaatga ggtcaacccc
     5341 gtgtaggctt atcaaatgca ctggtctcct ctcatctaga gctcgatctt gcctgattac
     5401 catccgccag ctcctggctc ttctcctcta acaccccggc tcagggtcat tgctagtgac
     5461 cgtgggctgc ccagtcctgg tcctgtcact gcctgccttc ctacaggaga ttcccaggga
     5521 gtggggccat aatgttgtgg ggaggagaga tgcaggctaa gctgggtgtg tgcattggtt
     5581 tgaaagggat ctcagcaaat ggaggcctgg ccagtacggt atgaagccag cgtcagagca
     5641 cagaaggctt ctacggagac tagctatgag gagagcttta atgctcactg gtacacccaa
     5701 agactcctta cccccctcag aaagcaagct atgaggacat taaagctggt gctggacatc
     5761 ttcatatcct ctcccaaact ggctgggagt ccagcctgcc aagtgagggc aggggacagg
     5821 gatggactac actgccgccc gacaggcatg gccgggccta gccttcccaa ccaccatgaa
     5881 gacaggacat gcaccaggag aaagaaggaa gatagacgtc gatgaagaga cacattggct
     5941 cttcagaaaa gctgcctggc atctctccag agcccagcct tcttgcccca aagaattctg
     6001 ccttctctat ttattatttt ctgtggctgc ctagtggttc cagtgctgtg tgtctttgtt
     6061 aactagtcca acagtgccta ggacctcgga ccattacagg tgacttagca ggaagtgact
     6121 ggtgcccagt ggaggtggat aggctggtcc tcgacgttaa atggtgaagt ctactcccca
     6181 gcacccatcc aaccctctgg ccgcctgtgg gccaactgct ccagttagtt ttgtgcacat
     6241 gtaaacttca tagtccagcc aacacatccc ttctcagcag cggcaattcc cctcccaaga
     6301 aggaagtttg ttcaggggtt ggaaggacag agctctccag gtgggtggat ataggcatgg
     6361 gttcttccca tccactccta ttgcccccac ctggggagct gtgaccacct ccccaggaca
     6421 tcggccaacc ttcatgccaa ggctgctctc accagctgct gcaggagaca aacaaggttc
     6481 atatgtacaa aactctacgg tgtccttttt acctgcaccc ttttataaga atatattgta
     6541 atactaaaaa aaatattaaa ttcctcccca ccccta
//
