LOCUS       XM_039084448            6053 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dishevelled associated activator of
            morphogenesis 2 (Daam2), transcript variant X2, mRNA.
ACCESSION   XM_039084448
VERSION     XM_039084448.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084448.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6053
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6053
                     /gene="Daam2"
                     /note="dishevelled associated activator of morphogenesis
                     2; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 17 ESTs, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 10 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:316201"
                     /db_xref="RGD:1306128"
     CDS             245..3568
                     /gene="Daam2"
                     /codon_start=1
                     /product="disheveled-associated activator of morphogenesis
                     2 isoform X1"
                     /protein_id="XP_038940376.1"
                     /db_xref="GeneID:316201"
                     /db_xref="RGD:1306128"
                     /translation="MALRKRSPHGLGFLCCFGSSDLPEIDLRDSHPLQYLEFSSPIPN
                     PEELNVCFAELVDELDLTDKNREAVFALPPEKKWQIYCSKKKEQEDPNKLATSWPEFY
                     IDRINAMATMQNLYDTEDEETDKRSQVVEDLKTALRTQPMRFVTRFIELEGLSCLLNF
                     LRGMDHATCESRIHTSLIGCIKALMNNSQGRAHVLAQPEAISIIAQSLRTENSKTKVA
                     VLEILGAVCLVPGGHKKVLQAMLHYQVYAAERTRFQTLLNELDRSLGRYRDEVNLKTA
                     IMSFINAVLNAGAGEDNLEFRLHLRYEFLMLGIQPVIDKLRQHENAILDKHLDFFEMV
                     RNEDDLELARRFDMVHIDTKSASQMFELIHKKLKHTEAYPCLLSVLHHCLQMPYKRNG
                     GYFQQWQLLDRILQQIVLQDERGVDPDLAPLENFNVKNIVNMLINENEVKQWRDQAEK
                     FRKEHMELLSRLERKERECETKTLEKEEMMRTLNKMKDKLARESQELRQARGQVAELT
                     GPVSSPPPPGGPLTLSSSTTTNDLPPPPPPLPLDNCTPPPPPPLPPGGPPIPPGAPPC
                     FSSGSPPPHEPLSSNEAPLRKKRIPQPSHPLKSFNWVKLNEERVSGTVWNEIDDSQVF
                     RILDLEDFEKMFSAYQRHQGCMQEGAQRERGNVRDGGTASRSLPAAETNDHRTEKASR
                     SMVSATGVKKELGSTEDIYLASRKVKELSVIDGRRAQNCIILLSKLKLSNEEIRRAIL
                     RMDEQEDLAKDMLEQLLKFIPEKSDVDLLEEHKHEIERMARADRFLYEMSRIDHYQQR
                     LQALFFKKKFQERLAEAKPKVEAILLASQELTLSKRLKKMLEVVLAIGNFMNKGQRGG
                     AYGFRVASLNKIADTKSSIDRNISLLHYLIMILEKHFPDILNMPSELLHLSKAAKVNL
                     AELEKEVGALRRGLRAVEVELEYQRQQARDPNDKFVPVMSDFITVSSFSFSELEEQLN
                     EARDKFAKALAHFGEQDSKMQPDEFFGIFDTFLQAFLEARQDLEAMRRRKEEDERRAR
                     MESMLKEQREKERWQRQRKVLVGGALEESGEFDDLVSALRSGEVFDKDLNKFKRNRKR
                     PGNQVAEVTRERAINRLNY"
ORIGIN      
        1 aggcaggaag ccacccagat tgaagcagtg tatccgtctc cagtcctgcc catccaggga
       61 ctgtgggtaa cagatttgga aacatacagg gagtggctag cccgggttgc acttccttgg
      121 aaatcctgtc cgagctggcc actgtagaga cgggaaggac cagcttcatg gttttcggga
      181 ctcaggattg tgccaatgag gacctaaggt gccttcctgc tgaccgcccc agcctgcagt
      241 gaccatggcc ctccgtaaga ggagtcccca tggcctgggc ttcctttgct gcttcggaag
      301 cagtgacctt cctgagattg acctccggga cagccatcca ttgcagtatc tggagttctc
      361 cagtcccatc ccgaacccag aggagctcaa cgtctgcttc gcagagctgg tggatgaatt
      421 ggacctcaca gataaaaacc gggaggctgt gtttgcactg ccaccagaga agaaatggca
      481 gatctactgc agcaagaaga aggagcagga ggacccgaac aagctggcaa ccagctggcc
      541 tgagttttac attgaccgta tcaatgccat ggccacgatg cagaacctgt atgacactga
      601 agacgaggag acagacaaga ggagccaagt cgtagaagac ctgaagacag ccctccggac
      661 acagcccatg aggttcgtga cccgcttcat cgaactggaa ggcctgtcct gtctgctgaa
      721 tttcctccgg ggcatggacc atgccacctg tgagagccgc atccacacgt ctctcatcgg
      781 ctgcatcaag gctctgatga acaactccca gggacgggca catgtcctgg cacagcctga
      841 ggccatcagc atcatcgccc agagcctgcg aacagagaac agcaagacga aggttgcagt
      901 gctggagatc ctgggtgcag tgtgccttgt gcctggaggc cacaagaagg tcctacaggc
      961 catgctacac taccaggtgt atgcagccga gcgcactcgt ttccagactt tgctgaacga
     1021 actggatcgc agtttgggcc ggtaccggga tgaggtcaac ctgaagacag ccatcatgtc
     1081 cttcatcaat gctgtcctca atgctggtgc tggagaggat aacctggaat tccgcctcca
     1141 tctccggtat gagttcctga tgctgggaat ccagccagtg attgataaac tccggcaaca
     1201 cgagaatgcc atcctggaca agcatttgga cttctttgag atggtccgga atgaggatga
     1261 cctggagcta gcccggaggt ttgacatggt ccacattgac acaaagagtg cctcccagat
     1321 gtttgagctg atccacaaga agctgaagca cacggaagcc tacccctgcc tgctctccgt
     1381 cctgcaccac tgcctgcaga tgccttacaa gcggaacggt ggctacttcc agcagtggca
     1441 gctcctggac cgcatccttc agcagatcgt cctccaggat gagcgaggtg tggaccctga
     1501 cctggcccca ctggaaaact ttaatgtcaa gaacatcgtc aacatgctca tcaatgagaa
     1561 cgaggtgaag cagtggcgag accaagcaga gaagttccgg aaagaacaca tggagctcct
     1621 gagccggctg gagagaaaag agcgggaatg tgagacgaag acactggaga aggaagagat
     1681 gatgcggacg ctcaacaaga tgaaggacaa gctggcccga gagtcgcagg agctgcgcca
     1741 agctagggga caagtggcag agctgaccgg cccagtgtct tccccccctc cccctggagg
     1801 tccgctcacc ttatcttcct ccacaacaac caacgatctg cctccacccc cgcctcctct
     1861 cccccttgac aactgcacac ccccaccccc accacccctc cctcccggag gacctcccat
     1921 ccccccaggt gccccaccct gcttcagctc aggctcgccc ccacctcatg aacccctctc
     1981 cagcaatgaa gccccactca ggaaaaagcg catcccccag ccttcacacc cattgaagtc
     2041 cttcaactgg gtcaagctga atgaggagcg tgtctccggc accgtgtgga atgagattga
     2101 tgactcgcag gtgtttcgga ttctggacct ggaagatttt gaaaaaatgt tctcggcata
     2161 tcagaggcac cagggttgca tgcaggaggg tgcccagaga gagagaggaa atgtgagaga
     2221 tggagggacc gcaagcagat ctctgccagc tgccgagacg aatgaccaca gaactgagaa
     2281 ggcttctagg tctatggtat cagctacagg tgtcaagaaa gaactgggct ccacagagga
     2341 catctaccta gcctcccgca aggttaaaga gctgtccgtc atcgatggcc ggagggccca
     2401 gaattgtatc attcttctct ccaagttgaa gctttctaat gaggagatac gacgggccat
     2461 cttgaggatg gatgaacagg aagacctcgc taaggacatg ctggagcagc tcctcaagtt
     2521 catcccggag aagagcgacg ttgacctcct ggaagagcac aagcatgaga ttgagcggat
     2581 ggcacgtgca gaccgcttcc tctatgaaat gagcaggatc gaccattacc agcagcggct
     2641 acaggccctc tttttcaaga agaagttcca ggaacggctg gctgaggcca agcccaaagt
     2701 agaagccatc ctgctggcct cccaggagct gaccctcagc aagcgtctga agaaaatgct
     2761 ggaggtggtc ctagccatcg gcaacttcat gaacaagggt cagcgtgggg gtgcctatgg
     2821 gttccgggta gccagcctca acaagattgc tgacaccaag tctagcattg acaggaacat
     2881 ctctctactt cattacctga tcatgatcct ggagaagcac ttcccggata tcctgaacat
     2941 gccctcagag ctgctgcatc tatccaaggc cgccaaggtc aacctggcag agctggagaa
     3001 ggaggtgggc gctctcagga ggggcctccg agcagtggag gtggagttgg aatatcagag
     3061 acagcaggca cgggacccca atgacaagtt cgtccctgtc atgagtgact tcatcaccgt
     3121 gtctagcttc agcttctccg agctggagga gcagttgaat gaggccaggg ataagttcgc
     3181 caaggcactg gcacactttg gagaacagga cagtaagatg cagccggatg aattctttgg
     3241 catcttcgac accttcttgc aggccttctt ggaggcccgg caggacctgg aggccatgag
     3301 gaggaggaag gaggaagatg agcggagggc acgaatggaa tccatgttga aggaacagcg
     3361 tgagaaagaa agatggcaga ggcagcggaa agtcttggtt ggaggcgccc tggaggagag
     3421 cggcgagttc gatgacctag tgtcagcctt gcgctctgga gaagttttcg acaaggactt
     3481 aaacaagttc aagcgcaacc ggaagcgacc tggaaaccag gtcgcagagg tcacccgcga
     3541 gcgggcaata aacaggctaa attattgact ttgggactgg ggactcacca catagcagca
     3601 agcctggaga cagggattag gggagaggag ttgaatagaa gaagcagtga cttctaatga
     3661 cttaagtgat ttggaaaact gggtttggga gccctgggct gggtcctggg ggcagtgtgc
     3721 ggttagaccg ggggtctccc cgcactgaca gaggctcttc tcttgtctct gtatattatc
     3781 cattctcgtc catgttctgc ccacccatgt tctgtccatc tccctgtgtg cccctccccc
     3841 tcctggccat cattctctaa gactagcttg ggcatccctg gcaggccctc gcaggctggg
     3901 tgacacttct ccagacctca cgctggcaca gagctgttta aaacccagga gacattcctg
     3961 tcccgacctt ttgtacagta tgtggtggtg gaggggaccc caagagctag cagtagggac
     4021 ttgaggctcc tatctgaaga gacagctcaa caaaacgtgg atctgggatg ggaaccagga
     4081 ggtttgtgtg ttctagctag ataaactcca gtatgttcct gacaaacggg accagagtca
     4141 gcaagtgagt tatctgtctg caccttttgc ctacaccaag tcctggggcc tcgattcttc
     4201 cctggccacc tccatcccac ttactaattt ctggccccca aattcatctc cagtttccag
     4261 aactctgcct caccatcagc ttatagtgag gttctggtga gaaggggtgt ccaaggaaga
     4321 ctcctgtcat cacctcacca gactcaggca tagaccctga agcaaaccct aaggtgactt
     4381 gaccactgtc ttggagagcc tgacctcagg tccccaccag aaggtagcac tcaaatgctt
     4441 cgctcccctc agttgactct cgatgtgcca caatggcctc ccagtctcca cctgcagggt
     4501 cacatggcgc tccatatact tggctgcagc tggccttggg gaattgttct tgaggactag
     4561 aactactctc tatatttaac tgtcactctg agggagacaa ttagactggg ggctgagaag
     4621 agcaggcagg agacgcccgg gagatgaggg aacgcttacg tacattcctt tggttcctca
     4681 gcctgactgc atgggatcac tctggccctc cgtccacact caccatgtat cctgtccatc
     4741 cgtctccagc cattttgatg gtattggtgg ggtggcactg ctatacctag gcaaatgttc
     4801 taaatgaggt caaccccgtg taggcttatc aaatgcactg gtctcctctc atctagagct
     4861 cgatcttgcc tgattaccat ccgccagctc ctggctcttc tcctctaaca ccccggctca
     4921 gggtcattgc tagtgaccgt gggctgccca gtcctggtcc tgtcactgcc tgccttccta
     4981 caggagattc ccagggagtg gggccataat gttgtgggga ggagagatgc aggctaagct
     5041 gggtgtgtgc attggtttga aagggatctc agcaaatgga ggcctggcca gtacggtatg
     5101 aagccagcgt cagagcacag aaggcttcta cggagactag ctatgaggag agctttaatg
     5161 ctcactggta cacccaaaga ctccttaccc ccctcagaaa gcaagctatg aggacattaa
     5221 agctggtgct ggacatcttc atatcctctc ccaaactggc tgggagtcca gcctgccaag
     5281 tgagggcagg ggacagggat ggactacact gccgcccgac aggcatggcc gggcctagcc
     5341 ttcccaacca ccatgaagac aggacatgca ccaggagaaa gaaggaagat agacgtcgat
     5401 gaagagacac attggctctt cagaaaagct gcctggcatc tctccagagc ccagccttct
     5461 tgccccaaag aattctgcct tctctattta ttattttctg tggctgccta gtggttccag
     5521 tgctgtgtgt ctttgttaac tagtccaaca gtgcctagga cctcggacca ttacaggtga
     5581 cttagcagga agtgactggt gcccagtgga ggtggatagg ctggtcctcg acgttaaatg
     5641 gtgaagtcta ctccccagca cccatccaac cctctggccg cctgtgggcc aactgctcca
     5701 gttagttttg tgcacatgta aacttcatag tccagccaac acatcccttc tcagcagcgg
     5761 caattcccct cccaagaagg aagtttgttc aggggttgga aggacagagc tctccaggtg
     5821 ggtggatata ggcatgggtt cttcccatcc actcctattg cccccacctg gggagctgtg
     5881 accacctccc caggacatcg gccaaccttc atgccaaggc tgctctcacc agctgctgca
     5941 ggagacaaac aaggttcata tgtacaaaac tctacggtgt cctttttacc tgcacccttt
     6001 tataagaata tattgtaata ctaaaaaaaa tattaaattc ctccccaccc cta
//
