LOCUS       XM_039112263            5896 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus dishevelled associated activator of
            morphogenesis 1 (Daam1), transcript variant X4, mRNA.
ACCESSION   XM_039112263
VERSION     XM_039112263.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039112263.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5896
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5896
                     /gene="Daam1"
                     /note="dishevelled associated activator of morphogenesis
                     1; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 54 ESTs, 5 long SRA reads, 12 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 17 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:314212"
                     /db_xref="RGD:1305119"
     CDS             221..3457
                     /gene="Daam1"
                     /codon_start=1
                     /product="disheveled-associated activator of morphogenesis
                     1 isoform X1"
                     /protein_id="XP_038968191.1"
                     /db_xref="GeneID:314212"
                     /db_xref="RGD:1305119"
                     /translation="MAPRKRGGRGISFIFCCFRNNDHPEITYRLRNDSNFALQTMEPA
                     LPMPPVEELDVMFSELVDELDLTDKHREAMFALPAEKKWQIYCSKKKDQEENKGATSW
                     PEFYIDQLNSMAARKSLLALEKEEEEERSKTIESLKTALRTKPMRFVTRFIDLDGLSC
                     ILNFLKTMDYETSESRIHTSLIGCIKALMNNSQGRAHVLAHSESINVIAQSLSTENIK
                     TKVAVLEILGAVCLVPGGHKKVLQAMLHYQKYASERTRFQTLINDLDKSTGRYRDEVS
                     LKTAIMSFINAVLSQGAGVESLDFRLHLRYEFLMLGIQPVIDKLREHENSTLDRHLDF
                     FEMLRNEDELEFAKRFELVHIDTKSATQMFELTRRRLTHSEAYPHFMSILHHCLQMPY
                     KRSGNTVQYWLLLDRIIQQIVIQNDKGQDPDSTPLENFNIKNVVRMLVNENEVKQWKE
                     QAEKMRKEHNELQQKLEKKERECDAKTQEKEEMMQTLNKMKEKLEKETTEHKQVKQQV
                     ADLTAQLHELNRRAVCASVPGGPSPGAPGGPFPPSGLGSLLPPPPPPLLSGGALPPPP
                     PPLPPGGPPPPPGPPPLGGILPPPGAPVSLTLKKKNIPQPTNALKSFNWSKLPENKLE
                     GTVWTEIDDTKVFKILDLEDLERTFSAYQRQQEFFVNNNSKQKEADAIDDALSSKLKV
                     KELSVIDGRRAQNCNILLSRLKLSNDEIKRAILTMDEQEDLPKDMLEQLLKFVPEKSD
                     IDLLEEHKHELDRMAKADRFLFEMSRINHYQQRLQSLYFKKKFAERVAEVKPKVEAIR
                     SSSEEVLRSSALKQLLEVVLAFGNYMNKGQRGNAYGFKISSLNKIADTKSSIDKNITL
                     LHYLITIVENKYPKVLNLSEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQK
                     SQPPQPGDKFVSVVSQFITLASFSFSDVEDLLAEAKELFTKAVKHFGEEAGKIQPDEF
                     FGIFDQFLQAVTEAKQENENMRKRKEEEERRARLEAQLKEQRERERKMRKAKESSEES
                     GEFDDLVSALRSGEVFDKDLSKLKRNRKRISNQVTDSSRERPITKLNF"
ORIGIN      
        1 atcctatcag aggaggcgag gatgatgtca cctgcgagtt ggtaacctac gagcggctgt
       61 gaagggaact gtttaaccgg atcccattgt accgggaacg cagagcggcc tttccagcat
      121 gcagcggctg ctcaggttgt cttctcgtgc agtctcagtt aatggggtag gaacaaaagg
      181 aagagtgttg taatatcaag aaataggaga aaattcaacc atggccccaa ggaagagagg
      241 cggaaggggg atttcattta tcttttgctg tttccgaaac aatgaccacc cagaaatcac
      301 atatcggctt aggaatgata gcaactttgc acttcagaca atggagccag cactgcccat
      361 gccccctgtg gaggagctgg atgtcatgtt cagtgaactt gtggatgaac tcgacctcac
      421 agacaaacat agggaggcca tgtttgcact tccagcagag aaaaagtggc agatatactg
      481 tagcaagaaa aaggaccagg aagaaaacaa gggagcaaca agttggcccg agttctacat
      541 tgatcagctc aattccatgg ctgctagaaa atctctgctg gctttagaga aggaagaaga
      601 agaagagagg agtaaaacca tcgagagtct aaagacagca ctgaggacaa agcccatgag
      661 gtttgtaacc agattcatcg acttggatgg cctgtcatgt attctcaact ttctgaagac
      721 catggactat gagacctccg agtctcggat acatacctcc ctcattggct gtataaaggc
      781 actaatgaac aactctcaag gccgggccca cgtcctggct cattctgaga gtattaatgt
      841 aattgctcag agtctgagca cagagaacat taaaacaaag gtggccgtgc tggaaatcct
      901 gggcgctgtg tgcctggttc ctgggggcca caagaaagtt ctgcaggcta tgctgcacta
      961 tcagaagtat gccagcgaga gaacccgctt ccagacgtta atcaacgact tggataaaag
     1021 cactgggcgc tatcgggatg aagtgagtct caagactgcc atcatgtcgt tcatcaatgc
     1081 agtgctgagc cagggagccg gagtggagag tttggacttc agactccatc ttcgctacga
     1141 atttctgatg ctaggaattc agcctgttat agataaatta agggaacatg agaattcaac
     1201 actagacagg cacttagact tttttgaaat gctccgaaat gaagatgaac tagaatttgc
     1261 caaaagattt gaactggttc acatagacac aaaaagcgcc actcagatgt ttgagctgac
     1321 caggaggagg ctcacccaca gcgaagccta cccccacttc atgtccattc tgcaccattg
     1381 cctgcagatg ccttacaaga ggagtggtaa cacagtccag tactggctgc tgctagacag
     1441 aatcatacag cagatagtta tccagaatga caaaggacaa gaccccgact ccacacctct
     1501 ggaaaacttt aatattaaga acgtcgtaag aatgctggtt aatgaaaacg aagttaagca
     1561 atggaaagag caagcagaga agatgaggaa agagcacaat gagctacaac agaagctgga
     1621 gaagaaagag agagaatgtg atgccaagac ccaagagaag gaagaaatga tgcagacctt
     1681 aaacaagatg aaggagaagc tggagaagga gaccactgag cacaagcagg ttaagcagca
     1741 ggtggcagac ctcacggcgc agctccacga gctcaacagg agggccgtct gtgcctcagt
     1801 cccaggagga ccctcaccag gagccccagg aggacccttt cctccctctg ggttgggctc
     1861 tcttctccct cccccaccac cccctctcct ttcaggtgga gcacttcctc ctccaccacc
     1921 tcccctccct cctgggggtc ctcctcctcc cccagggcct cctcccttag gaggaatcct
     1981 gccacctcct ggtgctccag tgagtctgac actcaagaag aaaaatattc cccagcccac
     2041 caatgccctg aaatccttca actggtccaa gttgcctgag aacaaattgg aaggaacagt
     2101 atggactgaa atcgatgata caaaagtctt caaaattcta gaccttgaag acctagaaag
     2161 aacattctct gcctaccaaa gacagcagga gttctttgtg aacaataact ccaagcagaa
     2221 agaagcagat gccattgatg acgcactgag ttccaaactt aaagtcaaag agctgtcagt
     2281 gattgatggt cggagagctc agaattgcaa catccttctg tcgaggttga agttatccaa
     2341 tgacgaaatc aagcgagcaa ttctaacaat ggatgaacag gaggacctgc ccaaggacat
     2401 gttagaacag cttttgaaat tcgtgcctga gaaaagcgac attgacctgc tagaagaaca
     2461 taaacatgag ttggaccgga tggccaaggc tgatcgcttc ctgtttgaga tgagcagaat
     2521 taatcattac cagcaacgac tgcaatcact gtacttcaaa aagaagtttg cagagcgtgt
     2581 ggccgaagtg aagcccaaag tagaagcgat ccgctccagc tcagaggagg tactcaggag
     2641 cagtgccctc aagcagctcc tggaggtggt tctggctttt ggaaattata tgaataaagg
     2701 acaaagaggc aatgcatatg gattcaagat ctccagcctc aacaagattg cagatacaaa
     2761 atccagtatt gacaagaaca ttaccctctt gcactatcta ataaccattg tggagaataa
     2821 gtaccccaag gtcctgaatc tcagcgaaga gttgcgggat attcctcaag cagcgaaagt
     2881 gaacatgact gagctggaca aagagatcag caccttgagg agtggcctga aagctgtgga
     2941 gacggaactt gagtatcaaa agtctcagcc cccgcagcct ggagacaagt ttgtgtctgt
     3001 tgtcagccag tttatcaccc tggcgagctt cagcttctca gacgtagaag atcttctagc
     3061 agaagctaaa gagctgttca ctaaagcagt gaagcacttt ggggaagagg ctggcaaaat
     3121 ccagccagat gagttctttg ggatctttga tcagtttctt caggctgtga cagaagcgaa
     3181 acaggaaaat gagaacatga ggaaaaggaa ggaggaggag gagcggaggg ctcgcctgga
     3241 agctcagctc aaagagcagc gggagaggga gcggaagatg aggaaggcca aggagagcag
     3301 tgaagagagt ggcgagtttg acgacctggt ctcggctctg cgctcaggag aggtgttcga
     3361 caaagacctt tcaaaactca aacggaaccg gaaacgcatt tccaaccagg tgacggacag
     3421 cagccgcgag cgaccaatca cgaaacttaa tttttagttt ccttgcatct ttttctagaa
     3481 agcgccgtag cagccctttg gagtgactag aacttttcat tacactgcct ttcgatccaa
     3541 aacagtggcg atttcttctc tcatctgtga gtgaaggtgt gaatgtgtgt gtaaatgtat
     3601 gtgtatatat gtgaaaatgt acatacaagt cttaagtgtt gtccggggac ctatgtgtat
     3661 gcttaaaaag ttcatgttaa tgtgtgcacc cagaaactct ttgtgtatgc attcatattt
     3721 ccctgaacac catgcctgtt cagaagcaca atactctctc ctgaaacaga tgacagacat
     3781 tcctttaaag gggggtgggg ggaggaaaga agaagttaag agaagcttgt cttgtgaagt
     3841 attttatggt tcccacagtt gatgtagtga ggcgattttc actggtggaa aaggaattgg
     3901 aacagactgg gctgagctca gcgctcgtgg gcgaggcacc gcgcccacat cagtgagtga
     3961 ctagcgagcg gaacagctct gaggttccga tgctgctgtt ggggtacaca cttgcctggg
     4021 gtacaaacgt ctgttgagaa catcttgcac acattcatat catgtagggt gtcattcaca
     4081 cttcgtttat acatttaaaa cttgaacacc aatttccccc taatttcatc gatttttctg
     4141 ccaagtgctc ttgatgactt cttcctttgg ttttgttttt gtttttttgg aaacacactt
     4201 tctaaatgat gcctcctgga tcctgggtta gggccagaat tgccagagcc tcctcactga
     4261 cctaacaata cagttctgta gacctgacaa atgaaatttc ccaccgagac ttagtggaag
     4321 aaccctgaag agtgttctta aaggcatagg ggtgctttat ggggtgtctt ctgttttctg
     4381 tataggccga gctgcatgtc ctgggataaa gggcattcat atggacacga aatgtcaaca
     4441 gtatctacag ggatgctcag atctatttat ctcaaaaata tttgaagtga tcgctgttac
     4501 gtgttgtcat tttaaattgt gtgtcagtga cgctacctgt acaatttcag tccaaaaaat
     4561 aaagctctca gggagaaatg ataaaaaaaa aaaaaaacaa aaaaaaaaaa acaatgagca
     4621 gtagaaaata aaatatggac gcttaccact ggcctgccaa ctcctagtat ccttaactta
     4681 tgtggtatgt aaagaggact gttactactt ttcttttgct ttatttattt gtaccagggt
     4741 gtggggaggg actagcgttt tctctttgtt ctccttctgt ccttctgtgg ctgggtttcc
     4801 tgtggagaga gtagttttcc ctattgcact acaatattat ttactcacta aactgaggtt
     4861 ttcagtaaag tatcaactgt ttattaagca cttactatgt accgggcata gtagagctat
     4921 agtggtagta agcaagacag agtccctgcc caccaatgaa ttctcactct aaatggggtt
     4981 ttcagggacg gtagaatacc agtgtgcata gtacacagga accatactat ttaaaaaata
     5041 atctctatgg actatattgt ttagtgcaga tggcaaggga tctgtgctgt gtgaaagctg
     5101 tgaaacagtg ctctaagaat tgtcaagagc tgtggttttt acattttttg tttttcttca
     5161 tcacatactt agcaactttt ctacccatta tgtagaagca aatagctctt cactaaggca
     5221 gtcacaggtg caaagcagag ctgactctcc cagccccgag ctaaccccag tctgcaagca
     5281 tcctggcagt ggtgccgatg cagacctggc tcgggccagc ctggggagga ggagcggggt
     5341 ggagtgatgg atttcactgt tcctgatcta aagtgcctct ttgtatattc ttttctattg
     5401 atagcaggaa aagtttggtc cagctcagtt ttggaactgt ggaaagagac tcacaccaga
     5461 gagcaagtct gtgtcgcatg tccccttgcc tttcttagaa tcctcctcac ttccatgtag
     5521 ccctcctggt aggccacctt tgcccttccc agcttccggt ttattttcct aaagactgtg
     5581 caggtaactt catgtgccat tgttacaaaa aaaaaaaaat ggacttttta gactggtgct
     5641 ggtgtaagta gtcacttttc tctcttgagt atgtatttta aagatttttt taaataatgc
     5701 caaaaaaaga aaagcattat aatttctaaa cttaatcaat gtctcgtatc ttactagctt
     5761 agtagttgga cccatttagt ctttagatgc aagactgttg ttacagaacc aagggaaaaa
     5821 aaggtgtcgt gtgtgctatg agactgtaca tttttttaaa tagcaatatg caataaagat
     5881 gacttcactg ggttta
//
