LOCUS       NM_001012086            1694 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus cytohesin 1 interacting protein (Cytip), mRNA.
ACCESSION   NM_001012086 XM_229936
VERSION     NM_001012086.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Boehm,T., Hofer,S., Winklehner,P., Kellersch,B., Geiger,C.,
            Trockenbacher,A., Neyer,S., Fiegl,H., Ebner,S., Ivarsson,L.,
            Schneider,R., Kremmer,E., Heufler,C. and Kolanus,W.
  TITLE     Attenuation of cell adhesion in lymphocytes is regulated by CYTIP,
            a protein which mediates signal complex sequestration
  JOURNAL   EMBO J 22 (5), 1014-1024 (2003)
   PUBMED   12606567
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC088207.1.
            
            On Feb 11, 2005 this sequence version replaced XM_229936.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC088207.1, CO559105.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5756307,
                                           SAMEA5760383 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q21"
     gene            1..1694
                     /gene="Cytip"
                     /gene_synonym="Pscdbp"
                     /note="cytohesin 1 interacting protein"
                     /db_xref="GeneID:311047"
                     /db_xref="RGD:1307990"
     exon            1..221
                     /gene="Cytip"
                     /gene_synonym="Pscdbp"
                     /inference="alignment:Splign:2.1.0"
     CDS             48..1127
                     /gene="Cytip"
                     /gene_synonym="Pscdbp"
                     /note="pleckstrin homology Sec7 and coiled-coil
                     domain-binding protein; pleckstrin homology, Sec7 and
                     coiled-coil domains, binding protein"
                     /codon_start=1
                     /product="cytohesin-interacting protein"
                     /protein_id="NP_001012086.1"
                     /db_xref="GeneID:311047"
                     /db_xref="RGD:1307990"
                     /translation="MSLQRLLQQQSSNGNLEYCADSAYSSYPTLTGPLTVEDNRRIQM
                     LADTVATLPRGRKQLALARSSSLGDFSCSQRKVVTVEKQDNGTFGFEIQTYRLQNQNI
                     CSSEVCTMICKVQEDSPAHCAGLQVGDIFANVNGVSTEGFTHKQVVDLIRSSGNLLTI
                     ETLNGTMIHRRAELEAKLQTLKQTLKKKWVELRSLHLQEQRLLHGDAANSPNLENMNL
                     DESSLFGNLLGPSPAFLDRPRLSSESSCKSWLSSLTVDSEDDYGTSVSEDSIRGAFSR
                     QTSTDDECFHSKDGDEILRNASSRRNRSISITSSGSFSPLWESNYSSVFGTLPRKSRR
                     GSVRKQILKFIPGLHRAVEEEESRF"
     exon            222..271
                     /gene="Cytip"
                     /gene_synonym="Pscdbp"
                     /inference="alignment:Splign:2.1.0"
     exon            272..326
                     /gene="Cytip"
                     /gene_synonym="Pscdbp"
                     /inference="alignment:Splign:2.1.0"
     exon            327..429
                     /gene="Cytip"
                     /gene_synonym="Pscdbp"
                     /inference="alignment:Splign:2.1.0"
     exon            430..523
                     /gene="Cytip"
                     /gene_synonym="Pscdbp"
                     /inference="alignment:Splign:2.1.0"
     exon            524..593
                     /gene="Cytip"
                     /gene_synonym="Pscdbp"
                     /inference="alignment:Splign:2.1.0"
     exon            594..660
                     /gene="Cytip"
                     /gene_synonym="Pscdbp"
                     /inference="alignment:Splign:2.1.0"
     exon            661..1673
                     /gene="Cytip"
                     /gene_synonym="Pscdbp"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgcaaggcca cggagccatg cgtcggtggg attaatcttt gtccacaatg tctctgcaaa
       61 ggcttctgca gcagcagagc agcaatggca atctggagta ctgtgccgac agtgcctaca
      121 gctcctaccc cacactcaca ggcccgctca cggtggaaga caacagaagg attcaaatgc
      181 tggcagacac cgtggctact ttgcctcggg gaagaaaaca gcttgcgttg gccagatcaa
      241 gctctctagg tgacttctcc tgctctcaaa ggaaggttgt tactgtggaa aagcaggaca
      301 atggaacctt tggatttgaa attcagacct acagacttca gaaccagaac atctgctctt
      361 cagaagtgtg cactatgatc tgcaaagtgc aggaagacag ccccgctcac tgtgctggcc
      421 tgcaagttgg tgacatcttt gcaaatgtca atggcgtgag cacagaaggc ttcactcaca
      481 aacaagtggt tgacctgatc cgatcttcgg gaaatctgct aacgatagag actcttaatg
      541 ggacaatgat tcacagaaga gcagaacttg aggcaaagct gcagacttta aagcaaacct
      601 tgaagaaaaa atgggtggag ctcaggtctc tgcacttaca ggaacagcgc ctgctgcatg
      661 gagatgcggc taactcccca aatttggaaa acatgaacct cgatgagtcc tctttgtttg
      721 gaaatctact ggggccgagt ccagccttcc tggaccggcc ccgattgtcc agtgagagca
      781 gctgtaagag ctggctgagc tccctcacgg tggacagtga ggatgactac ggtaccagcg
      841 tgtccgagga ctccatccgg ggcgctttca gtcggcagac cagcaccgac gatgagtgct
      901 ttcactctaa ggatggggat gaaattctaa ggaatgcttc ttccaggaga aaccggagta
      961 tcagtatcac tagtagtggg tccttttctc ctttgtggga gagcaattac tcaagcgtgt
     1021 ttgggactct gccccggaaa agcagacggg gaagtgtccg gaaacaaatt ttgaaattca
     1081 tccctggcct tcatcgtgct gtggaagagg aagagagtcg cttttgatgg gtggcagaga
     1141 ccttttgaat cgtctcatct cgtttcacaa tcctccacct gccaagatga actcctggct
     1201 tagtgggaaa gtgcagatag agtgtgaagc ttacatccca tttcagggca gcattgacct
     1261 ttaaattctt aaactgttat tttggggtct tatatcagga ttctggttgt tgttgttgtt
     1321 tgtttgtttt tgtttttttt ccccaatcat tagagctcaa gttctaagct gacatcaggg
     1381 gaggaaagta ataggttaaa taatgtaata atatgtctgt tcattttaat gctggccatg
     1441 aaagtacaaa agtatttatt atacgaacta tgcatgtaaa acgtggagat ttcttggagt
     1501 cacgtgtgaa tatggactga cagaatataa ttattgggtt gcttttcata tgttaattcg
     1561 ataaaccacg aaaccttgta tttggttaat ttactcagta gcctctgagg gagctaccac
     1621 aagagagaat taaagttgct ttcaaaccat taaaggaaca tattaaagaa aaaaaaaaaa
     1681 aaaaaaaaaa aaaa
//
