LOCUS       NM_001402495             721 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus cysteine-rich transmembrane module containing 1
            (Cystm1), mRNA.
ACCESSION   NM_001402495 XR_361318
VERSION     NM_001402495.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            On Mar 16, 2022 this sequence version replaced XR_361318.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ222514.1, FQ224367.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-23                JAXUCZ010000018.1  28225790-28225812
            24-241              JAXUCZ010000018.1  28247690-28247907
            242-721             JAXUCZ010000018.1  28287095-28287574
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18p11"
     gene            1..721
                     /gene="Cystm1"
                     /note="cysteine-rich transmembrane module containing 1"
                     /db_xref="GeneID:100363310"
                     /db_xref="RGD:2323233"
     exon            1..23
                     /gene="Cystm1"
                     /inference="alignment:Splign:2.1.0"
     exon            24..241
                     /gene="Cystm1"
                     /inference="alignment:Splign:2.1.0"
     CDS             43..348
                     /gene="Cystm1"
                     /codon_start=1
                     /product="cysteine-rich and transmembrane
                     domain-containing protein 1"
                     /protein_id="NP_001389424.1"
                     /db_xref="GeneID:100363310"
                     /db_xref="RGD:2323233"
                     /translation="MNPENPPPYPGPGPTAPYPPYPQQPMGPMGAPPPQGYPYPPPQG
                     YPYQGYPQYGWQGGPQEPPKTTVYVVEDQRRDDLGPSTCLTACWTALCCCCLWDMLT"
     exon            242..721
                     /gene="Cystm1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggccgcttc gtggaacaga gaggtgcatt gccaggttcc tgatgaaccc agagaaccct
       61 ccaccatatc cgggccccgg gccaacagcc ccatacccac cttatccaca acagccaatg
      121 gggcctatgg gagccccacc tcctcagggg tacccctacc caccacctca ggggtacccc
      181 tatcaaggat acccacagta cggatggcag ggtggacctc aggagcctcc taagaccaca
      241 gtgtatgtgg tagaagacca aagaagagat gacctgggcc catccacctg cctcacagcc
      301 tgctggactg ctctgtgttg ctgctgcctg tgggacatgc tcacctgatc acctgatgag
      361 cctagctctt ctgcttggcc gctctgtgcc actccgatag gtgtgcctgg gcccacctct
      421 tctgattgct gtattgacta gctctgcgca gacacctcta ctctcagtcc tatggagttt
      481 tagactagtg agggtttctg ctatttagtt cagtgacttg atctttttaa tgttcaaaac
      541 tcatttctta ctgatcttta acaaatgtgc taaataattt cccttttttt ttggccaaag
      601 gcttagttat gaaatatata tttataatgt ttaaattata cactcaaggt aatggcaata
      661 tgtgacacac cactagatct ctgctcacac cctatatgtt tcaataaatc tgtccaaaat
      721 c
//
