LOCUS       XM_039089972            1631 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cytochrome P450, family 2, subfamily
            w, polypeptide 1 (Cyp2w1), mRNA.
ACCESSION   XM_039089972
VERSION     XM_039089972.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 1, 2024 this sequence was replaced by
            NM_001427669.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1631
                     /gene="Cyp2w1"
                     /note="cytochrome P450, family 2, subfamily w, polypeptide
                     1; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins, and 28% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:288517"
                     /db_xref="RGD:1305193"
     CDS             1..1479
                     /gene="Cyp2w1"
                     /codon_start=1
                     /product="cytochrome P450 2W1"
                     /protein_id="XP_038945900.1"
                     /db_xref="GeneID:288517"
                     /db_xref="RGD:1305193"
                     /translation="MELLVLCVWGILLLLGLWGLLRGCAQDPSMTRQWPPGPRPLPFL
                     GNLHLLGVTHQDRALMELSERYGPMFTIHLGSQKTVVLSGYEVVREALVGTGHELADR
                     PPIPIFQLIQRGGGIFFSSGVHWKVARQFTVRTLQSLGIRQPPMVGKVLQELVCLKGQ
                     LDSYGGQPFPLTLLGWAPCNITFTLLFGQRFDYQDPVFVSLLSLIDQVMVLLGSPGIQ
                     LFNTFPRLGALLRLHRPVLSKIEEVRTILRTLLEAQRPPLPNGSPARSYVEALLQQGQ
                     DDPEDMFSEANVLACTLDMVMAGTETTAATLQWAVFLMVKHPHVQGRVQEELDRVLGP
                     GQLPQPEDQRALPYTSAVLHEVQRYITLLPHVPRCTAADIQLGGYLLPKGTPVIPLLT
                     SVLLDKTQWETPSQFNPNHFLDAKGCFMKRGAFLPFSTGRRVCVGESLARTELFLLFA
                     GLLQQYHLLPPPGLSPADLDLRPAPAFTMRPPAQTLRVVPRS"
ORIGIN      
        1 atggagctgc tggtcctgtg tgtctggggg atcttactac ttctggggct gtggggactg
       61 ctccggggct gtgcccagga cccctccatg acccgtcagt ggccccccgg gcctcgtcct
      121 ctgccattcc tggggaacct gcatctgctg ggtgtaaccc atcaagaccg ggcactgatg
      181 gagctctcag aacgctacgg gccgatgttc acaatccatc tgggatctca gaagaccgtg
      241 gtgctgtcgg gctacgaggt ggtgagggag gccttggttg ggactgggca cgagctagcc
      301 gaccggcccc caatccccat cttccagctc atccaacgag gtgggggcat cttcttttct
      361 tctggagttc actggaaggt ggctcgccag ttcacggtgc gcacactgca gagcctgggt
      421 atacgacagc cacccatggt gggcaaggtg ctgcaggagc tggtctgtct taaagggcag
      481 ctggacagct atggaggcca gccctttcct ctgaccctgc tgggttgggc accgtgcaac
      541 atcaccttca cactcctctt cggccagcgc tttgactacc aggatcctgt gtttgtgtcc
      601 ctgttgagtc tcattgacca ggtcatggtc ctgttgggct cacctggcat acagttattc
      661 aacacgttcc cccggctggg ggccttactg cggttgcaca ggccagtctt gagcaagatc
      721 gaggaggtgc gcaccatcct aagaaccctc ctggaagcgc agagaccacc cttgccaaac
      781 ggcagtccgg cgcggagtta tgtggaagct ctgcttcagc agggccagga tgacccggag
      841 gacatgttta gcgaggctaa tgttctggcc tgtacactgg acatggtcat ggctggaaca
      901 gagactacgg cagccacact gcagtgggca gtcttcctga tggttaagca cccacacgtg
      961 cagggtcgtg tgcaggagga gctggaccga gtgctgggcc ctgggcagct acctcaacca
     1021 gaggaccagc gagcactgcc ctataccagt gctgtgctgc acgaggtcca gcggtacatc
     1081 acactcctgc cccatgtgcc ccgctgcacg gctgctgaca tccagctggg tggctacctg
     1141 ctccctaagg gcacccccgt gattcctttg ctgacctcag tgctcctgga caagacgcag
     1201 tgggagactc caagccagtt caacccaaac cactttctgg atgccaaggg atgctttatg
     1261 aagcggggag cgttcctgcc tttctccact ggtcgccggg tctgcgttgg ggagagcctg
     1321 gccaggacag agctcttcct gctgtttgct ggcctcctcc agcagtacca tctgctgccc
     1381 ccacccggcc tcagccccgc agacctggat ttacggcctg ccccagcttt taccatgcgg
     1441 ccacccgccc agaccttgcg cgtggtgccg agatcctagg gtgctcacag accggaaaac
     1501 caccagagcc tagcctgcct ctccctgagg ttgcattgca ggtgatggga tagttgtagc
     1561 atccctagca atgaatgatg agcagtggtc cctctggacc accatagctt ttatgaccag
     1621 tgtacagtgt g
//
