LOCUS       XM_578474               1519 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cytochrome P450, family 2, subfamily
            j, polypeptide 16 (Cyp2j16), mRNA.
ACCESSION   XM_578474
VERSION     XM_578474.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_578474.4.
            
            On Jan 21, 2021 this sequence version replaced XM_578474.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1519
                     /gene="Cyp2j16"
                     /note="cytochrome P450, family 2, subfamily j, polypeptide
                     16; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 16 Proteins, and 17% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:502969"
                     /db_xref="RGD:1561242"
     CDS             1..1512
                     /gene="Cyp2j16"
                     /codon_start=1
                     /product="cytochrome P450 2J2-like"
                     /protein_id="XP_578474.1"
                     /db_xref="GeneID:502969"
                     /db_xref="RGD:1561242"
                     /translation="MLATVGSLLAKIWSAINFWTLLLTLLTFLLLADYLKNRRPNNYP
                     PGPWRLPFVGNLFQFDLNISHLHLRIQQFVKKYGNLISLDFGNISVVVITGLPLIKEA
                     LINNEQNFLKRPIVPSRYRVFKDNGIFFANVHKWKEQRRFALTMLKNFGLGKKSLEQC
                     IQEEAHHLVEVIGEEKGQPFDPHFRINNAVSNIICSITFGERFEYDDSQFQELLKLAD
                     EVICSEASMTSVLYNVFPLIFKYLPGPHQTVFKNWEKLKSIVANMIDRHRKDWNPDEP
                     RDFVDAFLTEMTKYPDKTTTSFNEENLIATTLDLFFAGTETTSTTLRWALLYITLNPE
                     VQEKVHSEIDRVIGHGRLPSTDDQDAMPYTNAVIHEVLRMGNIIPLNVPREVTADSTL
                     AGFHLPKGKMILTNLTALHRDPKEWATPDTFNPEHFLENGQFKKRDSFLPFSVGKRAC
                     PGEKLAKSELFIFFTALMQNFTFKAPTNEKLSLKLRKGLSLYPVSYRICAVPR"
ORIGIN      
        1 atgctcgcca ctgtgggctc cctgttggct aaaatatggt cagcaatcaa tttctggact
       61 ttgttgctca ctcttctcac cttcctgctc ttggctgact acctcaaaaa caggcgcccc
      121 aacaactacc ctccagggcc ctggcgcctt ccatttgtgg gtaacttgtt ccagtttgat
      181 ttaaatatat cacatctgca tttgaggatc cagcagtttg tgaagaaata tggaaaccta
      241 attagccttg attttggcaa catctcagta gtggtcataa ctggactgcc cttaatcaaa
      301 gaagctctca tcaacaatga acaaaacttt ttaaaacgcc ccattgtacc tagcaggtac
      361 cgtgtcttta aagataatgg aatttttttt gctaatgtcc ataaatggaa ggagcaaaga
      421 agatttgcac tgacaatgct caagaatttt ggattaggga agaagagctt agagcaatgc
      481 atacaggaag aggcccacca tcttgtggag gtcataggag aagagaaagg acagccattt
      541 gaccctcact tcaggatcaa caatgcagtt tccaatatca tttgctccat cacctttggg
      601 gagcgctttg agtatgatga cagtcagttt caagagctgc tgaagttagc agatgaggtc
      661 atatgttctg aggcatcaat gacatcagtg ctctacaatg tctttccact catatttaaa
      721 tatcttcctg gaccacatca aacagttttt aaaaactggg agaaactgaa atcgattgtt
      781 gcaaatatga tagaccgtca cagaaaagac tggaatcctg atgagccgag agacttcgtt
      841 gatgctttcc tgacagaaat gacaaagtac ccagacaaga ctactacaag tttcaatgaa
      901 gaaaatctca tcgctaccac tctggacctc ttctttgctg gaacagagac aacatccaca
      961 acattgcgct gggctctgct ctacattacg ctcaacccag aagtacaaga aaaagtacat
     1021 tctgagattg atagagtgat tggccatggg aggctgccaa gtacagatga ccaagatgcc
     1081 atgccctaca ccaatgctgt catccatgag gttctgagga tgggcaacat catccccttg
     1141 aatgttccca gggaagtgac agctgatagc acattggctg gattccacct gcctaagggc
     1201 aaaatgatcc tgaccaattt gactgctctg cacagggacc ccaaagagtg ggccacccca
     1261 gacaccttca atccagaaca ttttttggag aatggacagt ttaagaagag agactctttt
     1321 ctgcctttct cagtgggaaa gagagcgtgc ccaggagaaa aactggccaa gtccgagctg
     1381 ttcattttct tcactgctct tatgcaaaac tttaccttca aggccccaac caatgagaag
     1441 ctgagcctga agttgagaaa gggcctctcc ctttacccag tcagctaccg catctgtgct
     1501 gtacctagat agtgaaaga
//
