LOCUS       NM_001134980            1921 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus cytochrome P450, family 2, subfamily j,
            polypeptide 10 (Cyp2j10), mRNA.
ACCESSION   NM_001134980 XM_001058620 XM_233199
VERSION     NM_001134980.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1921)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001134980.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168751.1, SRR26643293.28561.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676811 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-321               JAXUCZ010000005.1  116110489-116110809 c
            322-484             JAXUCZ010000005.1  116103235-116103397 c
            485-634             JAXUCZ010000005.1  116100772-116100921 c
            635-795             JAXUCZ010000005.1  116100114-116100274 c
            796-972             JAXUCZ010000005.1  116095036-116095212 c
            973-1114            JAXUCZ010000005.1  116092490-116092631 c
            1115-1302           JAXUCZ010000005.1  116085438-116085625 c
            1303-1441           JAXUCZ010000005.1  116084585-116084723 c
            1442-1921           JAXUCZ010000005.1  116076012-116076491 c
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q33"
     gene            1..1921
                     /gene="Cyp2j10"
                     /gene_synonym="RGD1563215"
                     /note="cytochrome P450, family 2, subfamily j, polypeptide
                     10"
                     /db_xref="GeneID:313373"
                     /db_xref="RGD:1563215"
     exon            1..321
                     /gene="Cyp2j10"
                     /gene_synonym="RGD1563215"
                     /inference="alignment:Splign:2.1.0"
     CDS             112..1620
                     /gene="Cyp2j10"
                     /gene_synonym="RGD1563215"
                     /codon_start=1
                     /product="cytochrome P450, family 2, subfamily j,
                     polypeptide 10"
                     /protein_id="NP_001128452.2"
                     /db_xref="GeneID:313373"
                     /db_xref="RGD:1563215"
                     /translation="MLSTEDTLEAAIRALLHFRTLLLAAVTFLFLANYLKTRRPKNYP
                     PGPWRLPFVGNLFQLDVKQPHVVIQKFVKKYGNLTSLDFGTIPSVVITGLPLIKEAFT
                     NTEQNFLNRPVTPLRKRVFNNNGLIMSNGQTWKEQRRFTMTTLKNFGLGKRSLEQRIQ
                     EEANYLVEAIGADKGQPFDPHFKINSAVSNIICSITFGERFEYEDSLFQELLRLLDEA
                     SCLESSMMCQLYNVFPTIIKYLPGSHQTVLRNWEKLKLFISCMMDSHQKDWNPDEPRD
                     FIDAFLTEMAKYRDKTTTSFNKENLIYSTLDLFFAGSETTSNILRWSLLYITTNPEVQ
                     EKVHSEIDRVIGHRRQPSTGDRDAMPYTNAVIHEVLRMGNIIPLNVPREMTADSTLAG
                     FHLPKGTTILTNLTGLHRDPKEWATPDTFNPEHFLENGQFKKRDSFLPFSMGKRACPG
                     EQLARTELFIFFTALMQNFTFKPPVNETLSLKFRNGLTLAPVSHRICAVPRQ"
     exon            322..484
                     /gene="Cyp2j10"
                     /gene_synonym="RGD1563215"
                     /inference="alignment:Splign:2.1.0"
     exon            485..634
                     /gene="Cyp2j10"
                     /gene_synonym="RGD1563215"
                     /inference="alignment:Splign:2.1.0"
     exon            635..795
                     /gene="Cyp2j10"
                     /gene_synonym="RGD1563215"
                     /inference="alignment:Splign:2.1.0"
     exon            796..972
                     /gene="Cyp2j10"
                     /gene_synonym="RGD1563215"
                     /inference="alignment:Splign:2.1.0"
     exon            973..1114
                     /gene="Cyp2j10"
                     /gene_synonym="RGD1563215"
                     /inference="alignment:Splign:2.1.0"
     exon            1115..1302
                     /gene="Cyp2j10"
                     /gene_synonym="RGD1563215"
                     /inference="alignment:Splign:2.1.0"
     exon            1303..1441
                     /gene="Cyp2j10"
                     /gene_synonym="RGD1563215"
                     /inference="alignment:Splign:2.1.0"
     exon            1442..1921
                     /gene="Cyp2j10"
                     /gene_synonym="RGD1563215"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtgaacaaa gcagtggaca ggagttgtgg tggggcagag agaagcacag tcctcaagaa
       61 cagggttgaa cttagcagag gggctgtcag ggaaccagcc cggctctcac catgctatct
      121 actgaggaca ctctggaggc tgccatccgg gcactgcttc atttcagaac tctgttgctc
      181 gctgctgtca ccttcctgtt cttggctaac tacctcaaaa cccggcgtcc caagaactac
      241 cctccgggac cctggcgcct gccttttgtg ggcaacttgt tccagttgga tgtgaagcag
      301 ccacatgtag tgattcagaa gtttgtgaag aagtatggaa acctaactag cctggacttt
      361 ggaactatcc cttcagtggt cataactgga ctgcccttaa tcaaagaagc cttcactaac
      421 acggaacaaa acttcctgaa tcgccctgtt acacctctca gaaaacgtgt ctttaataac
      481 aatggattga tcatgtccaa tggccagaca tggaaagagc aaagaaggtt cacaatgacg
      541 acactcaaga actttggatt agggaaaagg agcttagagc aacgcataca ggaggaggcc
      601 aactatcttg tggaggctat tggagcggac aaaggacagc cttttgaccc tcacttcaag
      661 atcaacagtg cggtttccaa tatcatttgc tccattacct ttggggagcg ctttgagtat
      721 gaggacagtc tatttcagga gctgctgaga ttattggatg aggcctcatg tttggagtca
      781 tcaatgatgt gccagctcta caatgtcttt ccaaccataa ttaaatatct tcctggatca
      841 catcaaacag ttttgagaaa ctgggaaaaa ctgaaattgt ttatttcctg tatgatggac
      901 agtcaccaga aagactggaa ccctgacgaa ccaagagatt tcattgatgc tttccttaca
      961 gaaatggcaa agtaccgaga caagactact acaagtttca ataaagaaaa cctcatctac
     1021 agcaccctgg acctcttctt tgctggatca gagacaacat ctaacatact gcgctggtct
     1081 ctgctctaca taactacaaa cccagaagta caagaaaaag tacactctga gatcgacaga
     1141 gtaattggcc ataggagaca gccaagcaca ggtgaccgag atgccatgcc ctacaccaat
     1201 gctgtcatcc atgaggttct gaggatgggc aacatcatcc ccttgaatgt tcccagggaa
     1261 atgacagctg atagcacact ggctggattc cacctgccta agggcaccac aattctgacc
     1321 aatttgactg gtcttcacag ggaccccaaa gagtgggcca ccccggacac cttcaaccca
     1381 gagcactttt tggaaaatgg acagtttaag aagagagact ctttcctgcc tttctcaatg
     1441 ggaaagagag cttgccctgg agaacaactg gctcgaactg aattgttcat tttcttcact
     1501 gctcttatgc aaaatttcac cttcaaacct ccagtcaatg agacgttgag cctaaagttc
     1561 agaaatggcc tcacccttgc cccagtcagc caccgcatct gtgctgtccc cagacagtga
     1621 tgctggagaa gcaaagagaa aggaaagaag gaatgacttg ccctttgaaa ccactggtgc
     1681 ctacacacat aggaggaaac agaatgaagg tgacagagaa aagatgggaa aacttagagt
     1741 agagaaactg aatcaaattc ctggactgcc ggcccctcaa gttggttctg agtatacact
     1801 tatgtgctca taaaattgct gaaagaagaa ttattctttt catttttaaa gtgtatgtaa
     1861 agggatacag tgtattaaga atactattta acttataaat cacattaaaa gaggtgtgct
     1921 t
//
