LOCUS       NM_001419527            1839 bp    mRNA    linear   ROD 10-APR-2024
DEFINITION  Rattus norvegicus cytochrome P450, family 2, subfamily c,
            polypeptide 55 (Cyp2c55), mRNA.
ACCESSION   NM_001419527 XM_003749104
VERSION     NM_001419527.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Zaphiropoulos,P.G.
  TITLE     cDNA cloning and regulation of a novel rat cytochrome P450 of the
            2C gene subfamily (P450IIC24)
  JOURNAL   Biochem Biophys Res Commun 180 (2), 645-651 (1991)
   PUBMED   1953735
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Apr 7, 2023 this sequence version replaced XM_003749104.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643291.4734.1,
                                           SRR26643294.6597.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMEA5760400,
                                           SAMEA5760476 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-195               JAXUCZ010000001.1  246421783-246421977
            196-352             JAXUCZ010000001.1  246448179-246448335
            353-502             JAXUCZ010000001.1  246448519-246448668
            503-663             JAXUCZ010000001.1  246452468-246452628
            664-840             JAXUCZ010000001.1  246456707-246456883
            841-982             JAXUCZ010000001.1  246460670-246460811
            983-1170            JAXUCZ010000001.1  246461742-246461929
            1171-1312           JAXUCZ010000001.1  246463850-246463991
            1313-1839           JAXUCZ010000001.1  246466400-246466926
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q53"
     gene            1..1839
                     /gene="Cyp2c55"
                     /gene_synonym="Cyp2c80; CYPIIC24; CYPIIC55"
                     /note="cytochrome P450, family 2, subfamily c, polypeptide
                     55"
                     /db_xref="GeneID:100361492"
                     /db_xref="RGD:2320073"
     exon            1..195
                     /gene="Cyp2c55"
                     /gene_synonym="Cyp2c80; CYPIIC24; CYPIIC55"
                     /inference="alignment:Splign:2.1.0"
     CDS             28..1494
                     /gene="Cyp2c55"
                     /gene_synonym="Cyp2c80; CYPIIC24; CYPIIC55"
                     /EC_number="1.14.14.1"
                     /note="cytochrome P450 2C55-like; cytochrome P450, family
                     2, subfamily c, polypeptide 55-like; cytochrome
                     P450-PROS2; cytochrome P450 2C24; cytochrome P450, family
                     2, subfamily c, polypeptide 80"
                     /codon_start=1
                     /product="cytochrome P450 2C55"
                     /protein_id="NP_001406456.1"
                     /db_xref="GeneID:100361492"
                     /db_xref="RGD:2320073"
                     /translation="MDAVLVLVLILSSLLLLSFWRQNSERRKLPPGPTPLPIIGNILQ
                     IDVKDISKSIKKFSEVYGPVFTLYFGLKPTVVVYGYEVVKEVLDGEEFSGRGVFPIVT
                     KVNNDLGVIFSNGTKWKELRRFSLMTLRNFGMGKRSIEDRIQEEASCLVEELRKTNGS
                     LCDPTFILSCAPSNVICSVIFHNRFDYKDENFLNLMEKFNENFKILNSPWMQVCNAIP
                     AFIDYLPGSHNKVIKNFAEIKSYILRRVKEHQETLDMDNPRDFIDCFLIKIEQEKHNP
                     CTEFTIQSLVATVTDVFVAGSETTSTTLRYGLLLLLKHTEVTAKVQEEIDHVIGRHRR
                     PCMQDRTRMPYTDAMVHEIQRYINLIPNNVPHAATCNVRFRNYVIPKGTDLITSLTSV
                     LHDDKEFPNPEVFDPGHFLDEHGNFKRSDYFMPFSSGKRMCVGEALARMELFLLLTTI
                     VQNFNLKSFVATKDIDTTPLTNTFGCVPPSYQLYFTPR"
     exon            196..352
                     /gene="Cyp2c55"
                     /gene_synonym="Cyp2c80; CYPIIC24; CYPIIC55"
                     /inference="alignment:Splign:2.1.0"
     exon            353..502
                     /gene="Cyp2c55"
                     /gene_synonym="Cyp2c80; CYPIIC24; CYPIIC55"
                     /inference="alignment:Splign:2.1.0"
     exon            503..663
                     /gene="Cyp2c55"
                     /gene_synonym="Cyp2c80; CYPIIC24; CYPIIC55"
                     /inference="alignment:Splign:2.1.0"
     exon            664..840
                     /gene="Cyp2c55"
                     /gene_synonym="Cyp2c80; CYPIIC24; CYPIIC55"
                     /inference="alignment:Splign:2.1.0"
     exon            841..982
                     /gene="Cyp2c55"
                     /gene_synonym="Cyp2c80; CYPIIC24; CYPIIC55"
                     /inference="alignment:Splign:2.1.0"
     exon            983..1170
                     /gene="Cyp2c55"
                     /gene_synonym="Cyp2c80; CYPIIC24; CYPIIC55"
                     /inference="alignment:Splign:2.1.0"
     exon            1171..1312
                     /gene="Cyp2c55"
                     /gene_synonym="Cyp2c80; CYPIIC24; CYPIIC55"
                     /inference="alignment:Splign:2.1.0"
     exon            1313..1839
                     /gene="Cyp2c55"
                     /gene_synonym="Cyp2c80; CYPIIC24; CYPIIC55"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagtctccct gagaagagaa ggctgccatg gatgcagtcc tggttctggt gctcattctc
       61 tctagtctgc ttctcctctc attctggaga cagaactctg agagaaggaa gctccctcct
      121 ggtcccactc ctctcccaat cattggaaac atccttcaga tagatgtgaa ggacatcagc
      181 aaatctatta aaaaattctc agaagtctat ggccctgtat tcactctgta ctttggactg
      241 aagcctactg tggtagtata tggatatgaa gtggtaaagg aagtcctgga tggagaggag
      301 ttttctggtc ggggtgtctt cccaattgtt acaaaagtga ataatgacct tggggtcatt
      361 ttcagcaatg gaacaaaatg gaaggagctt cggcgtttct cacttatgac cttgagaaat
      421 tttgggatgg ggaagaggag catcgaggat cgaattcaag aggaagcctc ctgtcttgtg
      481 gaagagctaa gaaaaacaaa tggctcactc tgtgatccca cattcatctt gagctgtgct
      541 ccctccaacg tgatctgctc agttattttc cacaaccgtt ttgattacaa agatgagaat
      601 ttccttaact tgatggagaa attcaacgaa aactttaaaa tcttgaactc cccctggatg
      661 caggtttgca atgctatccc tgccttcatt gattatctcc caggaagcca taacaaagta
      721 attaaaaatt ttgctgaaat aaaaagttat attttgagac gagtgaaaga acaccaggaa
      781 acactggaca tggacaatcc tcgggacttc attgactgtt ttctgatcaa aatagaacag
      841 gaaaaacaca atccctgtac tgagtttact attcaaagct tggtggctac tgtaactgat
      901 gtgtttgtag ctggatcaga aaccacaagc actaccctga gatatggact tttgctccta
      961 ctgaaacaca cagaggtcac agctaaagtc caggaagaga ttgatcacgt gattggcaga
     1021 cacaggaggc cctgcatgca ggacaggacc cgcatgccct acacagatgc gatggtgcac
     1081 gagatccaga gatatattaa cctcatcccc aacaatgtgc cccatgcagc tacctgtaat
     1141 gttagattca gaaattatgt aattcccaag ggcacggact taataacatc attgacttct
     1201 gtgctacatg atgacaaaga atttcctaac ccagaagtat ttgaccctgg ccattttctg
     1261 gatgagcatg ggaactttaa gaggagtgat tattttatgc ctttctcatc aggaaagcga
     1321 atgtgcgtgg gagaggccct ggctcgcatg gagctgtttt tgcttctgac caccattgta
     1381 cagaatttta acctgaaatc ttttgttgct acaaaggaca ttgacactac cccattgacc
     1441 aatacttttg gttgtgtacc accttcatac cagctgtact tcactcctcg ttaaaacaga
     1501 acagacttgc tcttgctatg ttggtatctg tgatttctca gggggcactc tccacatcct
     1561 ttccactatt tgggacattt ctctcatttc tcttcacaca tatcttcatt ctcccacaat
     1621 ctagtgagca tctacctttc ttaaggtttc ctcgagttat catgcaagtc tgtctactgc
     1681 cctcttcagt ctgtaacact tatattgacc atgaactgta ctaagacatg tgctgagcta
     1741 ttaatatgag tgtaatacag aagagttcac ctgaaagcca tctccactct ggttgattca
     1801 aaacaaatag aattattaat taaaggattg tgtcattgt
//
