LOCUS       XM_217935               3543 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cytochrome P450, family 26, subfamily
            C, polypeptide 1 (Cyp26c1), mRNA.
ACCESSION   XM_217935
VERSION     XM_217935.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_217935.8.
            
            On Jan 21, 2021 this sequence version replaced XM_217935.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3543
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3543
                     /gene="Cyp26c1"
                     /note="cytochrome P450, family 26, subfamily C,
                     polypeptide 1; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 EST, 1 long SRA read, 3
                     Proteins, and 89% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:308190"
                     /db_xref="RGD:1308843"
     CDS             396..1952
                     /gene="Cyp26c1"
                     /codon_start=1
                     /product="cytochrome P450 26C1"
                     /protein_id="XP_217935.3"
                     /db_xref="GeneID:308190"
                     /db_xref="RGD:1308843"
                     /translation="MFSWGLSCLSMLGAAGTALLCAGLLLGLAQQLWTLRWTLSRDWA
                     STLPLPKGSMGWPFFGETLHWLVQGSRFHSSRRERYGTVFKTHLLGRPVIRVSGAENV
                     RTILLGEHRLVRSQWPQSAHILLGSHTLLGAVGERHRQRRKVLARVFSRPALEQFVPR
                     LQEALRREVRSWCAAQRPVAVYQAAKALTFRMAARILLGLQLDEARCTELAQTFERLV
                     ENLFSLPLDVPFSGLRKGIRARDQLYQHLDEVIAEKLREELTAEPGDALHLIINSARE
                     LGRELSVQELKELAVELLFAAFFTTASASTSLILLLLQHPAAIAKIQQELSAQGLGSP
                     CSCAPRASGSRPDCSCEPDLSLAVLGRLRYVDCVVKEVLRLLPPVSGGYRTALRTFEL
                     DGYQIPKGWSVMYSIRDTHETAAVYRSPPEGFDPERFGVESEDARGSGGRFHYIPFGG
                     GARSCLGQELAQAVLQLLAVELVRTARWELATPAFPVMQTVPIVHPVDGLLLLFHPLP
                     TLGAGDGSPF"
ORIGIN      
        1 gtagtgggca ggggtctgca gccttgagca gctgtggctg gcagcgcctg gtgagttgtt
       61 tctctggcct ccatactagg agtgctgagc cgagaggtgg gagcgttcca gaggcgaatg
      121 gcccaccttg gatgggctgg cactttttaa ctgaaatcgg ggaggaatgc cctgggtctt
      181 cagcctcgag gaaggcaaat tctctagtcg cccagggcta ttgctgcctt ccactgacaa
      241 ttttgtttta agaccggaag ctttgaatgt attgatctct ggcttggccc cctaaccctg
      301 ggccttttct ggactgggca ggtgagctct gctcagttct tgaggcccct gccttcccag
      361 tggcctactc cacccctcac ccctgcagtc tcgccatgtt ttcctggggg ctaagctgtt
      421 tgtccatgct gggggctgcc ggcactgctc tcctgtgtgc gggtctgctg cttggcctgg
      481 cccaacagct ctggaccctc cgttggactc tgagccggga ttgggcctcc accttgcccc
      541 tacccaaggg ctccatgggc tggccattct tcggtgaaac actgcactgg ttggttcagg
      601 gctctcgttt ccatagttcc cgccgcgagc gctacgggac agtgtttaag acgcaccttc
      661 tgggcaggcc agtgatccgg gtgagcggcg ctgagaacgt gcgcaccatc ctgctgggtg
      721 agcaccgcct ggtgcgtagc cagtggccgc agagcgcaca tattcttcta ggttcacaca
      781 cactccttgg cgcggttggt gagcgtcatc ggcagcggcg taaggtcctg gcgcgcgtgt
      841 tcagccgccc agctctggag caattcgtgc cacggctaca ggaggcgctg cggcgagagg
      901 tgcgctcctg gtgcgccgcc caacgacccg tagctgttta ccaggcggcc aaagcgctca
      961 ccttccgcat ggccgcgcgc atcctgctgg gtctgcagct agatgaagcg cgatgcaccg
     1021 agctggccca gacctttgag cggctggtgg agaacctctt ctcactgccc ttggacgtac
     1081 cgtttagcgg cctacgcaag ggcatccggg ccagggacca gttgtatcag cacctggatg
     1141 aggtcattgc tgagaagctt cgggaggaac tgacagcaga gccaggtgat gccctgcatt
     1201 tgatcattaa cagcgctagg gagctgggcc gtgagctctc agtgcaagag ctgaaggagt
     1261 tggctgtgga gctcctcttc gcggcctttt tcaccacggc cagcgccagc acatccctta
     1321 tcctgctgct tctgcagcac ccagcagcca tcgccaaaat ccagcaggag ctgtcggcgc
     1381 aggggctggg gagcccctgc agctgcgctc ccagggcctc aggatcgcga ccggactgca
     1441 gctgtgagcc ggaccttagc ctggcagtgc tgggccgttt gcgctacgtc gactgcgtag
     1501 tgaaggaggt gctgcgcctc ctaccgcctg tgtccggggg ctaccgcact gcactgcgca
     1561 cctttgagct ggacggttac cagattccca aaggctggag cgtgatgtat agcatcagag
     1621 acacacatga gacagccgca gtataccgta gcccgcccga gggcttcgat ccagagcgct
     1681 ttggcgtgga gagtgaagat gcgcggggct ctggtggccg ctttcattac atcccgttcg
     1741 gtggcggcgc gcgcagctgc ctgggccagg agctagcgca agcggtgctg caactgctcg
     1801 ccgttgagct ggtgcgcacc gcgcgctggg agctggccac acctgccttc cccgtaatgc
     1861 agacggtgcc catcgtgcac ccggtggacg ggctgctgct ccttttccac cctctcccga
     1921 ctttgggtgc gggcgacggg tcacccttct gactcactgc gtctctagcc ttggcttgcc
     1981 cagtagctgc tgcacacacg ccgccaatct tcagcgccct aggtcttcac tgcgcatata
     2041 ttcaccgagt cacgggttta agaaatggct ctgctagact ggaagtcgta gaatgagtca
     2101 cagacaccgc agtggagaag cgctgggctt ggggaaagag agtaggaggc aaataccaag
     2161 aactcaaagc agccaacgac ggagaaaacc tatttccact aaatgaaact tggcttcccc
     2221 ttactgtggc aagtccgcag ggagtttaga tttggggttc tggcagcagc ggcagtgatg
     2281 gcggtagtta ggtgttcgta tcaaactaat aggggatttg caacttttta aagttagcag
     2341 aaatagcagg atggttacca ggctgatctg atgtttgtcc aggagacaca cggagagggt
     2401 ccccgagctt ctattagctc aaacttagaa gattcgacta gagacttttg aaaagaaaaa
     2461 ttcctacttc atgaaattat ttaatatcct cgtttatata gaagatactg tgctctctgg
     2521 aaatgtctgt aagtctggtt cgtgtgaggt tgagacataa tcccttcatg ggagaattga
     2581 gataaacaag agatttgaga tgtttgtaac caaacaggaa gtccaagaaa taacatttcc
     2641 tgccagtggt tgagcaagga ggttggggct cggttgggca gccattctcc tggtgtgatg
     2701 gccaacggtg cagaggatga ggtacagaga tggtacagag acgtaccaac cagaaggaca
     2761 cactgtagcc tatacccaga gggtctagaa gttgggcagc ctcagtccca agcttccctc
     2821 tggaccacgg atctggatgc tgggtttggg agcatcgctg cactgtctga ctgcagagtt
     2881 gttctgcttc actcccttca ctatttagga ggagaaactg aggagagacc tatggctctc
     2941 ctgaggagcc actgctgtcc tgcacactct tccactgctc aatccccctg ccccacctct
     3001 gagccatgtc acctgtggaa ttcagccctt ttgccttcca gagctaccct taatctaaaa
     3061 ggcagtcggt ctttccaatc cagagggtcc cactactgct taaatcaaca ccactgtcat
     3121 ctgccttcat tccccaaagc ccccttcaac ctgccatcca catccccata ctgctgtgta
     3181 agaggacata accggtgacc ccaggaagtt gtaaccagcc caggctgacc ttagaggagg
     3241 aaattggtgg cctcctgacc ttatttatat ttgaatccac gtaaaaagtg gatcctgggg
     3301 ctcaaaggca aggacacaag cgggtacttg aaggttagca actgctgggg ttaacaccac
     3361 cataacccct atccgctagt aaaccatagc tggtcagagt agaggctagc ctgagctctg
     3421 cagacaccag aaggagcatc aaggtgcagg cctacaacct tgagcatccc agaaactgga
     3481 cctaggtgag gaggtcaaaa agcttccctt tcaggttgac tctgatttgg gggcaaggag
     3541 gta
//
