LOCUS       NM_199401               2029 bp    mRNA    linear   ROD 29-JUL-2024
DEFINITION  Rattus norvegicus cytochrome P450, family 20, subfamily a,
            polypeptide 1 (Cyp20a1), mRNA.
ACCESSION   NM_199401 XM_237189
VERSION     NM_199401.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC061716.1.
            
            On Jan 12, 2004 this sequence version replaced XM_237189.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC061716.1, SRR8487226.116109.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q32"
     gene            1..2029
                     /gene="Cyp20a1"
                     /note="cytochrome P450, family 20, subfamily a,
                     polypeptide 1"
                     /db_xref="GeneID:316435"
                     /db_xref="RGD:735221"
     exon            1..121
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
     CDS             50..1438
                     /gene="Cyp20a1"
                     /codon_start=1
                     /product="cytochrome P450 20A1"
                     /protein_id="NP_955433.1"
                     /db_xref="GeneID:316435"
                     /db_xref="RGD:735221"
                     /translation="MLDFAIFAVTFLLALVGAVLYLYPASRQASGIPGLTPTEEKDGN
                     LPDIVNSGSLHEFLVNLHGRYGPVVSFWFGRRLVVSLGTADALKQHFNPNKTLDPFET
                     MLKSLLGYRSGAGSGSEDHVRRRLYGDAVTAALQSNFPLLLKLSEELLDKWLSYPETQ
                     HIPLSQHMLGFALKFVTRMVLGDTFEGEQEVIRFQKIHGTVWSEIGKGFLDGSLDKNT
                     TRKNQYQEALMQLEAILKKIIKERKGGDFSQHTFIDSLVQRNLNEQQILEDSVVFSLA
                     GCIVTARLCTWAIHFLTTAEEVQKKLHKEVDHVLGKGPITSEKIEQLRYCQQVLCETV
                     RTAKLTPVSAQLQDIEGKVGPFIIPKETLVLYALGVVLQDASTWPSPHKFDPDRFADE
                     PVMKVFSSLGFSGTWECPELRFAYVVTTVLVSVLLKKLHLLAVDRQVFEMKYELVTSC
                     REETWITVSERH"
     exon            122..171
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
     exon            172..338
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
     exon            339..481
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
     exon            482..649
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
     exon            650..728
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
     exon            729..844
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
     exon            845..899
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
     exon            900..1020
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1021..1132
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1133..1197
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1198..1287
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
     exon            1288..1985
                     /gene="Cyp20a1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccaccgcgga gggcaaagcc ggcgaccgcg cggacgggcg ggaggaagca tgctggactt
       61 cgccatcttc gccgtgacgt tcctgctggc gctggtggga gcggtgctgt acctctaccc
      121 ggcttcccga caagcttcag gaattccagg gcttactcca actgaagaaa aagatggtaa
      181 tcttccagac attgtgaaca gtgggagttt gcatgagttc ctggttaatt tgcatggaag
      241 atacgggcct gtggtctctt tctggtttgg caggcgtctt gtggtcagct taggcaccgc
      301 tgatgcactg aaacagcatt tcaaccccaa taagactttg gacccatttg aaaccatgtt
      361 gaagtcacta ttaggctatc ggtctggtgc tgggagtggg agcgaggacc acgtgaggag
      421 gagactgtac ggagatgctg tgacggctgc tttgcagagt aactttcctc tcctgctgaa
      481 gctctcagaa gaattattag acaaatggct gtcctaccca gagacccagc acatacctct
      541 gagccagcat atgcttggtt ttgctttgaa gtttgtcaca cggatggtac tgggtgacac
      601 atttgaaggt gaacaggaag tcatccgatt ccaaaagatt cacggcacag tgtggtctga
      661 gattggaaaa ggctttctag atgggtcact tgataaaaac accactcgga aaaaccagta
      721 tcaagaggct ctcatgcaat tggaagctat tttaaagaaa atcataaagg aacgaaaagg
      781 aggggacttc agtcaacata ccttcattga ctccttagta cagagaaacc ttaatgagca
      841 gcagatccta gaggacagtg tggtgttctc tctggccggc tgcatagtaa ccgcaaggtt
      901 gtgtacctgg gccattcact tcctaacaac agctgaagaa gttcagaaga agctacacaa
      961 ggaggtagac cacgttttgg ggaagggtcc tattacttca gagaaaatcg agcagctcag
     1021 atattgccag caagtacttt gtgaaaccgt tcggactgcc aaactaactc cagtttctgc
     1081 ccagcttcaa gatatcgaag gaaaagtggg tccattcatt attcctaagg agacgctcgt
     1141 cctttatgcc ctcggagtgg ttcttcagga cgccagcact tggccatcac cacacaagtt
     1201 tgatccagac cgctttgctg acgagccggt gatgaaagtg ttttcttctc ttggcttctc
     1261 aggcacatgg gaatgtccag aactgaggtt tgcttacgtg gtgaccacag tgcttgtgag
     1321 tgtgttgctg aagaagctac atctgcttgc tgtagacaga caagtttttg aaatgaagta
     1381 tgaactggtc acgtcctgca gggaggaaac ttggatcact gtctccgaaa gacactagac
     1441 gtttatgcac ttaaagtctg ttaagaatat gaagggaaat gcccagttag aatgtgctga
     1501 gttcctttat aaacccagta tccttttgtg atataaattt ggatttttat atgtcaaaat
     1561 ttcttaatgt atgatatatg tttatactta tattgacaac tttaatagga aagtttgatt
     1621 ttcttttaat ttgcatcatc atctaagcca ttttttaatt tttattatta ttggggggca
     1681 atggcttttg agacggggtt tctctgtata gccctggcta ctctggaact cactctttag
     1741 accaagctgg cctcaaactc acagagagcc acctgcccct gcctccagag tgctgggatc
     1801 aaagtcatgt gccaccacct cctggctaag ccatttttta aacttgatgt tcttagtttg
     1861 atctcgcaga tgagtaatct tagagaagtc ttttgtgcaa gctggagaat cacgttttct
     1921 ggatattcat aaaagagaaa cacaatgttg cttttcgcat ttctaataaa tcacctatca
     1981 ttctaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
