LOCUS       NM_001191890            3356 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus cytochrome b5 domain containing 1 (Cyb5d1), mRNA.
ACCESSION   NM_001191890 XM_343918
VERSION     NM_001191890.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3356)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Oct 29, 2022 this sequence version replaced NM_001191890.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ223142.1, SRR26360181.2865444.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN12840129,
                                           SAMN12840132 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-212               JAXUCZ010000010.1  54616164-54616375   c
            213-289             JAXUCZ010000010.1  54616002-54616078   c
            290-508             JAXUCZ010000010.1  54615656-54615874   c
            509-3356            JAXUCZ010000010.1  54612230-54615077   c
FEATURES             Location/Qualifiers
     source          1..3356
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..3356
                     /gene="Cyb5d1"
                     /gene_synonym="RGD1559567"
                     /note="cytochrome b5 domain containing 1"
                     /db_xref="GeneID:363629"
                     /db_xref="RGD:1559567"
     exon            1..212
                     /gene="Cyb5d1"
                     /gene_synonym="RGD1559567"
                     /inference="alignment:Splign:2.1.0"
     CDS             53..739
                     /gene="Cyb5d1"
                     /gene_synonym="RGD1559567"
                     /EC_number="3.6.4.12"
                     /codon_start=1
                     /product="cytochrome b5 domain containing 1"
                     /protein_id="NP_001178819.1"
                     /db_xref="GeneID:363629"
                     /db_xref="RGD:1559567"
                     /translation="MPRRGLVAGPDFGCFKRRYFTPSEVAEHNQPEDLWVSYLGFVYN
                     LTPLVQEFKGDLLLKPILEVAGQDISHWFDPKTKDIRKHIDPLTGCVRYRTPRGRFVH
                     IPPPLPRSDWANDFGIPWWKGLNYQVGRLSAQTRNIRIINTLTSQEHTLEVGALDSMW
                     EILHRYLPYNAHAASYTWKYDGKNLNMDQTLEENGIRDEEEEFDFLNMDGTLHTPAIL
                     LYFNDDLTEL"
     exon            213..289
                     /gene="Cyb5d1"
                     /gene_synonym="RGD1559567"
                     /inference="alignment:Splign:2.1.0"
     exon            290..508
                     /gene="Cyb5d1"
                     /gene_synonym="RGD1559567"
                     /inference="alignment:Splign:2.1.0"
     exon            509..3356
                     /gene="Cyb5d1"
                     /gene_synonym="RGD1559567"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggagcgag aaagtagctg agggagcctg tgtctcttat agaacaggag ccatgccgcg
       61 ccggggccta gtggcggggc cagactttgg ttgttttaag cgtcgttatt tcacgccgtc
      121 agaagtagcg gaacacaacc agcccgaaga cctatgggtg tcttatctgg gatttgttta
      181 caatctaaca ccacttgtac aggaattcaa aggggaccta ctgttgaaac ccatcctgga
      241 ggttgcaggc caggacatta gtcactggtt tgatccaaag accaaagaca ttcgcaagca
      301 catagatcca ctgactggtt gcgtgagata tcgcaccccg cgaggccgct tcgtgcatat
      361 cccgcctcct ctgccccgtt cagactgggc caatgatttc ggaataccct ggtggaaggg
      421 gctaaattac caggtgggac ggctgtctgc ccagacccgg aacatccgta ttattaacac
      481 tcttacatca caggagcaca cactggaggt gggggctctg gattcaatgt gggaaatcct
      541 acaccgctat ctcccctata atgcacatgc tgccagctat acatggaaat atgatgggaa
      601 gaatttgaac atggatcaaa ccctggaaga aaatgggatc cgggatgaag aagaagagtt
      661 tgacttcctt aacatggatg gtacacttca cacacccgca atactactct acttcaatga
      721 tgacctcaca gagctctagg aaaggagatg tgcatgtaga tgtttgagtt tgcctctttc
      781 tgtccttgag gaatcgaggt gtgggtctgt ggggcctggg cctacacctc tgttccctgc
      841 tggggctcag cctgtggtcc atgtgccttt ctgacatgta agggccttat ccctggctcc
      901 tttgctcatg gatgatttgc tcaaagagca ttagaggggt cttaggagag aatcctcaga
      961 acagaaagag acctagaggc tcaggaatgg gaggagataa ggctcagaca gaacttttgt
     1021 agtcgtaaga gaaagacaca aagggatgaa gggatggaag atcgtttttg gtaaaaggga
     1081 gaatgagatg ttagtaggaa ggtgggattt acaaagacag gatttggaaa ttagtatcac
     1141 cagtcataga tggttggttg acttcctttc taaaggtgtt tactagttgg tgccctggga
     1201 aaagtgaatg catttagttt aggattggaa atatgctgga gttttacgct gctaagtaca
     1261 gctgtcctat agggtgacta cattagtgcc atttcacaga tgctccctta ggaatttaca
     1321 aaggtttagt agcacaagtg cacgtttgtg gtagagccac agtgcacaaa cgtgccctgc
     1381 tctggaagtc aggctgtttt tagtgtaaag gaacattttc agtagctttg cctaatgcta
     1441 ccattttttt tttcaaaccg tgtatttggg atgtgagctt gtccaaggct tgctgcatga
     1501 tggggaaatg tgagtctatt gtgtactcaa tattttctgt gtttgcaggg agttaattaa
     1561 aagagtactc tggggacaga ggcagggaag gctaaatttc agccaagcac tgctactgag
     1621 gctacttcct tgttgctatc ataacaagat ttctgattgt tgggggtggg gagtggggag
     1681 gcaacaatat agatatttac tgactccagg caaaaccaga atggagaaag gtctgtagat
     1741 caagacattg tagtgaggac ccaatagggg gcgccttctt tttccagtag gccttgccac
     1801 ttacagacat caaggaagac agagttgttt gtcaaatggt gaccctaaaa gaagtttatt
     1861 ggggtcagaa agaggggagc tatgagaggc agacaactcc cataatgact ggctacatct
     1921 ggttcccttt gtctctaaca gaggagggga attaaggata actgataaat tgagccaggc
     1981 atggtggttt taatcccagc actggggagg cagagacagg tggatctcat gagttccatg
     2041 ctagcctggt ctacaaaaca agttccagga accctgcctc aaaaccgaca acatagtaac
     2101 tgataagtga gcctgcagca ggggcagcca atatgagtca aggagcctgc atcttcccag
     2161 ccgcgggtgg cctccacgag acactggctg ggctgcactg ccactgtggg aagcatgagc
     2221 aaaggtcaaa ctcctgattt cagctatttc ttagtctact ggtgctgaag actttcactt
     2281 agtcccatgc ggcctaagag tccatacatt gtctgaatca ataatcgtga tgttcagtca
     2341 gcttggacat gatcaatgtt tattcttatt tgttcttcta agtcttaaac tatttgagag
     2401 ccaaagcagt tcctcctatg acttctgctg ggaatgttcc agggtgtctc gttctgccca
     2461 ggtttctctc ttttccagaa caccccactg gttgtagatt gcctggggct tcattgtgta
     2521 gccctggctg gcccagaact cagagatcac ttgcctgttc acaacttctt gttagaaaca
     2581 cacactcctt tccctataag cccaagcact catcaatttt atatctaaga atctttggaa
     2641 tctgttcttt tgtctaatgt aataaccatc tttgtctcag actgttggga aaccagctga
     2701 cgtccaattt ctgcctctgc cttcacaaac ctaaatatct tactttctgc ctcagatctt
     2761 cagtaggttt ttcatgcttt tggaataaag ctctaaataa agccttgcat aaatcaggct
     2821 ctgccttctt tgcccatggc aacccctcac agttgtcctt gtcctgcaag ccatgaggtc
     2881 tcttcttccc ttagttaaca cagaaactgt tctcagtgca ccataccctt ctactttgca
     2941 ccctgattat cctaagtatc cgttgtttta aagttttatt tattttatat gagtacacta
     3001 tcactgtctt cagacacacc agaagagaga attggatcca ttacagatgg ttgtgagcca
     3061 ccatgtggtt gctgggaatt gaactcagga cccagtctgg aagagcagtc ggtgctctta
     3121 accactgagc catctctcca gcccccgttt ttttttcctt tgtctttttt ggcccacttc
     3181 tcagcagtat gcatttttct atgttttatt attactttaa aactatgtag aatgggtgaa
     3241 aatggctggc tggctgctag attgtaagct cacgagggca gaaactcact cttttctgta
     3301 tttccattgc cgggcacata gctgctgctc aataaatatg actgaaggaa cctgga
//
