LOCUS       NM_001277236            1739 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus cytochrome b561 family, member D1 (Cyb561d1),
            mRNA.
ACCESSION   NM_001277236
VERSION     NM_001277236.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FM044099.1 and JAXUCZ010000002.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643290.9627.1, FM044099.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-607               FM044099.1         1-607
            608-1739            JAXUCZ010000002.1  198523031-198524162 c
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..1739
                     /gene="Cyb561d1"
                     /note="cytochrome b561 family, member D1"
                     /db_xref="GeneID:362017"
                     /db_xref="RGD:1310829"
     exon            1..218
                     /gene="Cyb561d1"
                     /inference="alignment:Splign:2.1.0"
     CDS             71..760
                     /gene="Cyb561d1"
                     /codon_start=1
                     /product="cytochrome b-561 domain containing 1"
                     /protein_id="NP_001264165.1"
                     /db_xref="GeneID:362017"
                     /db_xref="RGD:1310829"
                     /translation="MHSMEVGLVPAPSREPRLTRWLRRGSGILAHLIALGFTIFLTVL
                     SRPGTSLFSWHPVFMALAFCLCMAEAILLFSPEHSLFFFCSRKTRIRLHWAGQTMAIL
                     CAAVGLGFIISSKIRSELSHLVSWHSWMGALTLLATGGQALCGLGLLCPRAARVSRVA
                     RLKLYHMTCGLVVYLMATVTVLLGMYSVWFQAQIKGAAWYLCLVLPLYPALVIMHQIS
                     SSYLPRKKVDI"
     exon            219..256
                     /gene="Cyb561d1"
                     /inference="alignment:Splign:2.1.0"
     exon            257..1739
                     /gene="Cyb561d1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgcctccgc gatcgcaaac ccggaagaag cctccggtag ctgtactgtg ccggccggcc
       61 tggcactgcc atgcattcca tggaggtagg tctggttccc gctccatcga gggaaccgag
      121 actgacccgc tggctgcgga gaggcagtgg gatcttggcg cacctgatag ctttgggctt
      181 caccatcttt ctgacagtgc tgtcccggcc cggaaccagt cttttctcct ggcaccctgt
      241 gttcatggcc ttggcgttct gtctctgcat ggctgaagcg atcctactct tctcacctga
      301 gcactccctg tttttcttct gctctcgaaa gacccggatt cgactccact gggcagggca
      361 gaccatggcc atcctctgtg ctgccgtagg cttgggcttc atcatttcca gcaagatccg
      421 aagtgagctg tcccatctgg tgtcctggca cagctggatg ggagccctga cactgttggc
      481 cactggagga caggcactgt gtgggctggg cctcctctgt ccacgagcag cccgggtctc
      541 aagggtggct cgcctcaagc tctaccatat gacatgtggc ctggttgtct acctgatggc
      601 tacagtaacg gtgctcttgg gcatgtactc agtgtggttc caggctcaga tcaaaggtgc
      661 agcctggtac ctgtgcctgg tactaccatt gtacccagcc ctggtgatta tgcaccagat
      721 ctccagctcc tacttgccaa ggaagaaagt ggatatatga atgcctccaa actctgaatc
      781 taggtgggat gcttgccttg gatttcaagg atcttggtga tcttcacggg acccacttca
      841 gaagtagatg catttttgca cttcatggct gagccacatc gtgcagaaac cctagctgct
      901 gttgtttgag gcatgatcca gtgggctcaa atagggaaat gtcctactgt gtgcacgtga
      961 aggttatgga gaacctgaag cctcactctt gatgagagac agaagtatta ggtggtggtg
     1021 gtggtggtgg tggtggtggt ggcagtggcg gtggtggcga tttcttgctt gtgtgcctga
     1081 tgaagagttc ttttaaatta tgaatggcag ccacagacac tggggtccct gtcgagaaag
     1141 cagtgctatg gagagcccat gatctcttag gcagtgtacg atcaacctta gacaagttcc
     1201 acgtgacagg acctcagttt ttgcatcaga aagtccctta tctttaacat tggtgtctga
     1261 cagattgatg tcaatgatat cctcttagct ctggaccatg tgggcagctt agggtgtaat
     1321 tctttcatcc actctccctt tactccctgg aaggaccctt cagaaatcat gctgacttgg
     1381 ctcctgaacc aagaaacaag gaccacgaac tgtggaagaa ggaacccagg tgagggtctc
     1441 ctggacagta aggcagtaaa ggcactaaag tcactttaaa gctctctgga ggaactgaag
     1501 gcattggcct caccaagctc tttactctcg ggctccttag ctgagctaag acctctcttc
     1561 tggctacctc tgggtatctc ctgacattca ttctcagggc agagtggccc tgggcatctt
     1621 acactttgcc cttagggctt aaagagtgtt ttctcagcac atcactccgt ggaactattc
     1681 tgaagctttt agaacaaaat aaaaaccaaa ggagttggca cctctcgacc taaggaaaa
//
