LOCUS       NM_001014164            2741 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus cytochrome b561 family, member A3 (Cyb561a3),
            mRNA.
ACCESSION   NM_001014164 XM_342022
VERSION     NM_001014164.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Schroder,B., Wrocklage,C., Pan,C., Jager,R., Kosters,B.,
            Schafer,H., Elsasser,H.P., Mann,M. and Hasilik,A.
  TITLE     Integral and associated lysosomal membrane proteins
  JOURNAL   Traffic 8 (12), 1676-1686 (2007)
   PUBMED   17897319
REFERENCE   2  (bases 1 to 2741)
  AUTHORS   Zhang,D.L., Su,D., Berczi,A., Vargas,A. and Asard,H.
  TITLE     An ascorbate-reducible cytochrome b561 is localized in macrophage
            lysosomes
  JOURNAL   Biochim Biophys Acta 1760 (12), 1903-1913 (2006)
   PUBMED   16996694
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001014164.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085835.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-130               JAXUCZ010000001.1  216641108-216641237
            131-195             JAXUCZ010000001.1  216654332-216654396
            196-394             JAXUCZ010000001.1  216656046-216656244
            395-603             JAXUCZ010000001.1  216658520-216658728
            604-758             JAXUCZ010000001.1  216659527-216659681
            759-2741            JAXUCZ010000001.1  216660513-216662495
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..2741
                     /gene="Cyb561a3"
                     /gene_synonym="Cybasc3; RGD1304670"
                     /note="cytochrome b561 family, member A3"
                     /db_xref="GeneID:361729"
                     /db_xref="RGD:1304670"
     exon            1..130
                     /gene="Cyb561a3"
                     /gene_synonym="Cybasc3; RGD1304670"
                     /inference="alignment:Splign:2.1.0"
     exon            131..195
                     /gene="Cyb561a3"
                     /gene_synonym="Cybasc3; RGD1304670"
                     /inference="alignment:Splign:2.1.0"
     exon            196..394
                     /gene="Cyb561a3"
                     /gene_synonym="Cybasc3; RGD1304670"
                     /inference="alignment:Splign:2.1.0"
     CDS             211..981
                     /gene="Cyb561a3"
                     /gene_synonym="Cybasc3; RGD1304670"
                     /EC_number="7.2.1.3"
                     /note="cytochrome b ascorbate-dependent protein 3;
                     cytochrome b, ascorbate dependent 3; LCytb; lysosomal
                     cytochrome b"
                     /codon_start=1
                     /product="lysosomal membrane ascorbate-dependent
                     ferrireductase CYB561A3"
                     /protein_id="NP_001014186.1"
                     /db_xref="GeneID:361729"
                     /db_xref="RGD:1304670"
                     /translation="MASGWFYMSCMVLGSLGSMCILFTTYWMQYWRGGFAWDGTVLMF
                     NWHPVLMVSGMVVLYGAASLVYRLPASWVGPKLPWKVLHAALHLLAFTVTVVGLTAVF
                     GFHNHSKITHLYSLHSWLGITTVALFACQWFLGFAVFLLPWASQWLRSLLKPVHVFFG
                     ACILSLSIASVISGINEKLFFVLKNATRPYSSLPGEAVFANSTGILVVSFGLLVLYIL
                     LASSWRRPDPGALTDRQVWLLVSHYRWDKAKKACFAPC"
     exon            395..603
                     /gene="Cyb561a3"
                     /gene_synonym="Cybasc3; RGD1304670"
                     /inference="alignment:Splign:2.1.0"
     exon            604..758
                     /gene="Cyb561a3"
                     /gene_synonym="Cybasc3; RGD1304670"
                     /inference="alignment:Splign:2.1.0"
     exon            759..2741
                     /gene="Cyb561a3"
                     /gene_synonym="Cybasc3; RGD1304670"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttaaacaga ggataagagg tatgcttaac taagcagtcc tggtcaaggt gtggtttggt
       61 ccattattgt ctctgatcca aggtggtctg acaagtaggt ttttaaaact gtgaaatctc
      121 ttcctagaag gttgcttgga cagtgaaagt cagagatcag gccacctttc tgcgagcctt
      181 ctgctggttc tgaaggagtt cttgatcaga atggcttcgg gatggtttta catgtcctgc
      241 atggtgctgg gatccctggg atcaatgtgc atcctcttca ctacctactg gatgcagtac
      301 tggcgcggtg gctttgcctg ggatggcact gtgctcatgt tcaactggca cccagtgctc
      361 atggtctccg gcatggtggt gctctatgga gccgcctcac tggtgtaccg cctgcctgca
      421 tcatgggtgg ggcccaagct gccctggaaa gttctccatg cagcactgca cctgctggcc
      481 ttcaccgtca ctgttgtggg gctgactgcc gtctttgggt ttcacaacca ttcaaaaatc
      541 acacacctct actcgctgca tagctggctg ggcatcacca ctgtcgccct cttcgcctgc
      601 cagtggttcc tgggctttgc cgtctttctc ctgccctggg catcccagtg gctgcgaagc
      661 ctcctgaagc ctgtgcatgt cttctttgga gcctgcatcc tttccctgtc catcgcctct
      721 gttatttctg gcatcaatga gaagctcttc tttgttttga aaaatgccac caggccttac
      781 tccagccttc ctggtgaggc tgtctttgcc aacagcacag ggatcttggt agtgtctttt
      841 ggcttgctgg ttctctatat tcttctggct tcttcatgga gacgtccaga tccaggagct
      901 ctgactgaca gacaggtatg gctgcttgtc tcccattata ggtgggataa ggccaagaag
      961 gcttgctttg caccttgcta agattgaccc tgtagccacg tgggaagtca accagctcga
     1021 aggtgcagat tgagtgggtc aatgggaaat ctggtaacag agtgcctagc ctgggagtga
     1081 cttcccaagg ttccccccaa cccccctaca aggttccttg gctctgaagg gcttgagctc
     1141 tgtgacaaga ctactgggac aagggcttag tgatactcaa gtgcttaaag caggtcttgc
     1201 ctgttcttgc tactgagttg tctggcagat gtgggaagat atgctatgga ccaatctctc
     1261 aggaactttt gggcttccct gaaagatctg gtggcttggc tgggttcacc ctgcaggttg
     1321 agggtctatc tgagcaactc aggcctggtg ttcctcctga agctcaggct tttgaggcca
     1381 tgtctttaac ccctgtgcat cttccttctt tccagcccct gttgcatgac agggagtgaa
     1441 gccggcaggg ctcccgggaa cagttggaga tgcagtctgc tccctcagaa gctctgctgt
     1501 actggggctc ccggctggtt tcagcaacag acttctcttg ggccagagac caaacttgct
     1561 actccagttc caggcttgct ctccagccac ttgctgttca tctgcttttc ttggtggctt
     1621 tgacttgttg ccattttttc aggttctcca tttgcacaag gatctccttg ccttggtcac
     1681 tcttgtctct tctgttggtc tgcagatttc agcctgcttt ccttaccact cctagggatg
     1741 tggtagaaac caaagctggg gttcaaatgt agcccacaca tgtaaaatat aaaatctgct
     1801 ctctgtggga gcatttgtct ccgttaggca ggttttctct tctgctctgt cctggatgtg
     1861 catttgggtg ggcagtggca ttgaggggta actcctggga caggggcagt aggagaagcc
     1921 tttgctgtaa gttaggtgcc cgacacgctg cttgttcact ttgatgtgct gtattgtgtg
     1981 tattgtgacc atgtggttcc ccttcttcta gttgctgctc cagctgctac ctggatcccg
     2041 ccctttacct gtgacttaca tgcctgtacc cctcaggtag ccctatgagc cctgttaaac
     2101 agttctccca agaacagacg tcctgcccct agagtcccag tgatcagtga gcggtttctt
     2161 tgggcttcct ttctgtcccc ttgtgggtat gggctttcct gcctcctata gttatgcttt
     2221 cccctgacag ggccccagct cactatgaat ttgaaaccag cattatgaag caatttgctg
     2281 ggcaaagctc acattctggt ttatcagtca tgaggggact aggtgacctt ttggggaaca
     2341 gaagcaccca ctacttaata aggaacaccc taaaggcagc agcagtgaat ggctttgctc
     2401 ttctcctgaa taacaagtgg gtagcgaagg aggagtcttg tcccattcct ttgtgttagc
     2461 ctgtggcact tcgtgccttc ttcaggcaag ccctgccagg tccctcagca ggcaagtagg
     2521 aagagttggg ttcctgcact ctctgcagat agtgaccagg ctgaacttca acccgactgc
     2581 cagaagttgg gaggagggct ggcatggact tgctgaccag atgaagcctg aattccattg
     2641 ggataactgc tggcaccttc atgagcatct tcctgcttca ctcatgagtg ggtattttac
     2701 ctcatgaatc tgactcttat taaatgtttt taaacattaa a
//
