LOCUS       NM_001107056            2683 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus cytochrome b-561 (Cyb561), mRNA.
ACCESSION   NM_001107056 XM_001081563 XM_221030
VERSION     NM_001107056.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Vargas,J.D., Herpers,B., McKie,A.T., Gledhill,S., McDonnell,J., van
            den Heuvel,M., Davies,K.E. and Ponting,C.P.
  TITLE     Stromal cell-derived receptor 2 and cytochrome b561 are functional
            ferric reductases
  JOURNAL   Biochim Biophys Acta 1651 (1-2), 116-123 (2003)
   PUBMED   14499595
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001107056.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC169069.1, SRR26643288.43717.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-19                JAXUCZ010000010.1  91388418-91388436   c
            20-229              JAXUCZ010000010.1  91384140-91384349   c
            230-441             JAXUCZ010000010.1  91381802-91382013   c
            442-540             JAXUCZ010000010.1  91380782-91380880   c
            541-644             JAXUCZ010000010.1  91380413-91380516   c
            645-802             JAXUCZ010000010.1  91379928-91380085   c
            803-2683            JAXUCZ010000010.1  91377866-91379746   c
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..2683
                     /gene="Cyb561"
                     /note="cytochrome b-561"
                     /db_xref="GeneID:303601"
                     /db_xref="RGD:1310987"
     exon            1..19
                     /gene="Cyb561"
                     /inference="alignment:Splign:2.1.0"
     exon            20..229
                     /gene="Cyb561"
                     /inference="alignment:Splign:2.1.0"
     exon            230..441
                     /gene="Cyb561"
                     /inference="alignment:Splign:2.1.0"
     CDS             243..995
                     /gene="Cyb561"
                     /codon_start=1
                     /product="cytochrome b-561"
                     /protein_id="NP_001100526.1"
                     /db_xref="GeneID:303601"
                     /db_xref="RGD:1310987"
                     /translation="MEQSAASVPAALPYYVAFSQLLGLTVVAVTGAWLGLYRGGIAWE
                     SSLQFNVHPLCMVMGMIFLQGDALLVYRVFRKEAKRTTKILHGLLHIFAFIIALVGLV
                     AVFDYHKKKGYADLYSLHSWCGISVFVLYFMQWLVGFSFFLFPGASFSLRSRYRPQHT
                     FFGATIFLLSVGTALLGLKEALLFKLGSKYSTFEPEGVLANVLGLLLICFGVVVLYIL
                     AQADWKRPTQAEEQALSMDFKTLTEGDSPSPQ"
     exon            442..540
                     /gene="Cyb561"
                     /inference="alignment:Splign:2.1.0"
     exon            541..644
                     /gene="Cyb561"
                     /inference="alignment:Splign:2.1.0"
     exon            645..802
                     /gene="Cyb561"
                     /inference="alignment:Splign:2.1.0"
     exon            803..2683
                     /gene="Cyb561"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctggcggcgg cgggaccagg ctctcgagag atgaatctaa taagggagga gtgacctgga
       61 gaggaggagg caggacagaa gactacaagg ggggggggac agcattctct ctctgttgga
      121 tacctgagga gtctcagaag gacgaagtga ccctcttgcc tttgaggagc aggacaggac
      181 acttccgtgg agagcatcgt gggattaatc tagagcagaa cccaagaggc tggggtctca
      241 gaatggagca gagtgctgcg tctgttcctg ctgcattgcc gtattatgtg gccttctccc
      301 agctgctggg cctcaccgtg gtggctgtga ctggtgcgtg gctgggtcta taccgaggtg
      361 gcattgcctg ggaaagctcc ctgcagttta acgtgcaccc gctctgcatg gtcatgggca
      421 tgatcttcct gcaaggcgac gctctgctcg tgtacagagt cttcagaaag gaagccaaac
      481 gcacaaccaa gatcttgcac gggttgcttc atatcttcgc cttcatcatc gccctggtgg
      541 gcttggtggc tgtgttcgac tatcacaaga agaagggcta tgctgacctg tacagtttgc
      601 acagctggtg tgggatctca gtctttgtcc tctacttcat gcagtggctc gtgggtttca
      661 gcttcttcct gtttcctgga gcttcgttct ctctgcggag ccgctaccgc cctcagcaca
      721 ctttctttgg tgccaccatc ttcctcctct ctgtgggcac agccctactg ggcctgaagg
      781 aggccctgct gtttaaactt gggagcaagt acagcacgtt tgaacctgag ggggtcctgg
      841 ccaatgtgct gggcttgctg ctgatctgtt ttggggtggt tgtgctgtac atcttggctc
      901 aagctgactg gaagcggcca acccaggctg aagaacaagc tctctccatg gacttcaaga
      961 cactgacaga gggagacagc cccagtcccc agtgattgcc ttccttgtcc tgtacagggg
     1021 gctgcaatgt gggcagtcct cttggctctg ttgatttcca gatgtctttt tgctcttccc
     1081 agcagacact gagtctaggt ccaggagtgt ggggctgtgc tgttagttta ttggggttct
     1141 ggggctttgg tattgtccta ggtctccctt cctgcccttc ctctctgcag cttctgatgc
     1201 atcctgtgag ctgtgtgtag gctctgcctg taccccctct tgtccataca catgcagaaa
     1261 gcttggtcag gggtctgggg tccagcctgg tcctggtcct cattggagct agacagtagc
     1321 tctaccctcc ttgcagcaga tggctgggca gggcctgagg gactggcatg gggaaatcaa
     1381 gactgctgtt gcattgtgtg ttcaacccag gagtcccagc agcttgcgaa gcacgtgtcc
     1441 ttggcagtga agcaagtgat attatgtgta aagtatgctg gtgttcagag taaggctccc
     1501 cagaaaggtt gactctggct ccccgaagga tccctggctc cctggtgtgt gggttgacca
     1561 cagtcttgga cctttctgtt cttttaaatc cctgatcctt aaataggctt ttcatggggg
     1621 aggggattgg tcatcaaaac acaggtaaat acctgcctgg tggaggaggg aaggctgcta
     1681 gcagtgaggg gcctcctggc ctcccgctgc cttggcagag ttcctccctt cagcagggga
     1741 taagccctag tttcccttgg gccagcctgg gcaggctcag agagtgggag gccacacacc
     1801 tcctgagttt ttggaagagg gctgctgttt gtcttgtttt ccagggactg ctggggtacc
     1861 ctggctgggt tgaagcagcc ctgagggatc atggtcctcc cacccctggg cccatcattg
     1921 ctggacaata ggactgaagt ggaagagagg aatgggatgg gtctcctgtg gtgcctgcac
     1981 ttaacttcaa cccctactgc ctgttgtgtt gttagctgag tcaccgtttg gcttgagtct
     2041 agaaatactg ggattagagc actggtcttg tgttctctgg cttggcacat gctctctcct
     2101 tgttttcctc ctctcttgga ttttgagcct cacactttgt gacacatatg gttaacttag
     2161 tgagggaata aatggtttct gaacctggca gttcttttag gtcaataggc tggccttctc
     2221 cgtcagattt ctaataactg tgctttaggt cctgcttctg gtgatgtctc ttctcccagc
     2281 tgtggtgtag cccctctgcc tgaggctacc taacaccctg agatggtgag gtttgtctcc
     2341 agttccactt gtatatgttg taaggatagg ggatcttaga agacctgtca ttcgttggca
     2401 cacttgtaca gtcaaatgtt tacatttggg agactcgtcc ttagaccaac taatgagtgc
     2461 cattgggagt ctcccttgcc agactacaca gagaattaga atttaggtct ccaacgagag
     2521 tctgtaaact aggctttttg ccaaagtgta tgatacatga ctaaggacca aagaaggccc
     2581 ccaagcagat gtctgtggtt tcttctgttt cttctgtttt ctgtgacgta catacagtgt
     2641 gttgttggtt caacagacaa atcaataaat gtctacagcc gac
//
