LOCUS       XM_006244575            5488 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cullin 7 (Cul7), transcript variant
            X1, mRNA.
ACCESSION   XM_006244575
VERSION     XM_006244575.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 4, 2024 this sequence was replaced by
            NM_001426929.1.
            
            On Jan 21, 2021 this sequence version replaced XM_006244575.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5488
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5488
                     /gene="Cul7"
                     /note="cullin 7; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 30 ESTs, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 216 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:680835"
                     /db_xref="RGD:1587048"
     CDS             392..5488
                     /gene="Cul7"
                     /codon_start=1
                     /product="cullin-7"
                     /protein_id="XP_006244637.1"
                     /db_xref="GeneID:680835"
                     /db_xref="RGD:1587048"
                     /translation="MVGELRYREFRVPLGPGLHAYPDELIRQRVGHNGHPEYQIRWLI
                     LRRGDDGDSSQVDCKAEHILLWMTDDEIYANCHKMLGEDGQVIRPSQESAEAGALDKS
                     VLGEMETDVKSLIQRALRQLEECVGAVPPAPLLHTVHVLSAYASIEPLTGVFKDRRVL
                     DLVMHMLSSPDYQIRWSAGRMIQALSSHDAGTRTQILLSLSQQEAIEKHLDFDSRCAL
                     LALFAQATLTEHPMSFEGVQLPQVPGRLLFSLVKRYLCVTFLLDRLNGNAEDQDAQNN
                     FIPEELNAGRGRVELEFSMAMGTLISELVQAMRWDWASSRSESSSPIFQPPPTEFFRP
                     RAQRFRRSRRFRPRTAFASVNTYALYVRDTLRPGMRVRMLEDFEEISAGDEGQFRQSN
                     DGMPPVQVLWDSTGHTYWVHWHMLEILGFEEDIEDVVDIDDQGAMVHGGLGVAPPFQH
                     WKPIAQLFAEPYVVPEEEDREEREHLTQAEWWELFFFIKKLNAEERQHVVELLQEFLE
                     GEHVLDFEILPELTVPVELAQDLMLSLPQQLDDSALRDLFNCYVYRKYGPEVLVGKRN
                     RPFVLDDQLNLFRIETDSEDEAGAEAQDPPSQSASPALRQLVEGLGPSGKLLVDLERA
                     LSSEAPQENEVKPCLLQLQEEPQPFLTLMRSLDTPASNKALHLTALRILMQLVNFPEA
                     LLLPWHEAMDACMTCLRSPNTDREVLQELIFFLHRLTSTSRDYAVILNQLGARDAISK
                     VLEKHRGKLELAQELRDMVFKCEKHAHLYRKLTTNILGGCIQMVLGQIEDHRRTHRPI
                     QIPFFDVFLRYLCQGSSAEVKKNKYWEKVEVSSNPHRASRLTDRNAKTYWESNGTAGS
                     HFITVHMRPGVLIRQLTLLVAGEDSSYMPAWVVVCGGDSISSVNTELNAVNVMPHASR
                     VILLENLTRFWPIVQIRIKRCQQGGINTRIRGLEVLGPKPTFWPVFREQLCRHTRLFY
                     MVRAQAWSQDIAEDRRSLLHLSSRLNGALRQEQNFADRFLPDEEAALALSKTCWEALV
                     SPLVQNITSPDEDSTSSLGWLLNQYLECREAAYNPQSRAAAFSSRVRHLTHLLVHVEP
                     CEAAPPVVAISQSKGRNRSHDWSSLTTRGLPSSIMRNLTRCWRSVVEEQVNKFLTSSW
                     KDDDFVPRYCERYYILQKSSSELFGPRAAFLLAMRNGCADALLRLPFLRAAHVSEQFA
                     RHIDQRIQGSRMGGARGMEMLAQLQRCLESVLILSPLEIATTFEHYYQHYMADRLLSV
                     GSSWLEGAVLEQIGPCFPGRLPQQMLQTLNISEELQRRFHVYQLQQLDQELLKLEDTE
                     KKIQVAHEDSGKEHKSKKEDAAGETAAVAMADEEEEEGKKEEGEEEEGEGEEELEEEE
                     ERYYEGTMPEVCVLVLSPRFWPVASVCHMLNPTTCLPSYLRGTINHYSNFYSKSQSHS
                     GLEKESPRQLQWTWQGRAEVQFGDQILHVSTVQMWLLLHLNHLKAVSVESLQALSELP
                     PEVLNKAIGPLTSSRGPLDLQEQKNIPGGVLKIRDDSEEPRPRRGNVWLIPPQTYLKA
                     EDEEGRNLEKRRNLLNCLVVRILKAHGDEGLHIDQLVHLVLEAWEKGPCPPRGLVSSL
                     GRGAACRSSDVLSCILHLLGKGTLRRHDDRPQMLFYAVPITVMEPHTESLNPGSSGPN
                     PPLTFHTLQIRSRGVPYASCTGTQTFSTFR"
ORIGIN      
        1 aactggaggg ctgcgtcgtc caggtggcac tcgctactcc tcccgctgat agccccgggc
       61 ctccagcttt ccgctaaatc tggcggaaac gagcggtggc tgatgcaggc ggcggagctt
      121 gggagcgccc gaagccctag ccaggactag gctccaccct gcagcaggca gtgcgcaggc
      181 gcgcgccgtg aaatctcctg ctggccacgc cctctgcccg cctgtctcct gcacaggcac
      241 gccccctcct ctgcgcctag accccttcag ggggcccagg cggggcccaa acactcgtca
      301 gcgcagcagc cgccatcgtg tgcagcgcgt ccctatctct gcaaaggaca ggcctcgcgc
      361 caggatcccg gtggacttct gaggtgccag gatggtgggg gagctccgct acagggaatt
      421 cagggtgccc ctggggcctg gcttgcacgc atatccggat gaattgatcc gccaacgggt
      481 tggccataac gggcaccctg agtatcagat ccgctggctc atcctcaggc gcggagatga
      541 tggggactct agtcaagtgg actgcaaggc tgagcatatc ctgctatgga tgactgacga
      601 tgagatctat gccaactgcc acaagatgct gggggaggat ggccaagtca tcagaccttc
      661 ccaggagtct gcagaggctg gggccctcga taaatctgtg ctgggggaga tggaaacgga
      721 tgtgaagtcc ttgattcaga gggcccttcg gcagctggag gagtgtgtgg gcgctgttcc
      781 tcctgcccca ctccttcaca cggtccatgt actcagtgcc tatgccagca ttgaacccct
      841 cacgggcgtc ttcaaagatc gcagagttct ggacttggtc atgcacatgt tgagcagtcc
      901 tgattatcag atccgctgga gcgcaggccg gatgatacaa gctctgtcct cccatgatgc
      961 tggaacccgg acccagatcc ttctgtcact gagccaacaa gaggccatcg aaaagcacct
     1021 ggattttgac agccgctgcg ctctgcttgc actgtttgcc caggctactc tcacagaaca
     1081 cccgatgtcc ttcgagggcg ttcagctgcc acaggtccca ggacggctgc tcttctccct
     1141 ggtgaaacgc tacctatgtg tcaccttcct cctggatcgg ctgaacggca acgcagagga
     1201 tcaagatgcc cagaacaact tcattccaga ggagttgaat gctgggaggg gccgggtgga
     1261 actggaattc agtatggcca tgggcactct gatctccgag ctggtgcaag ccatgcgctg
     1321 ggactgggcc tcaagcagat cagagagctc ctctcccatt ttccagcctc cgccaacaga
     1381 gttcttccgc ccccgtgccc agcgtttcag gaggtcaagg cggtttcgcc cgcgcaccgc
     1441 atttgcgagt gtcaacacct atgccttgta tgtgcgggat acgctacggc ccgggatgcg
     1501 ggtacggatg ctggaggatt tcgaggagat cagtgctggg gacgaaggcc agttccgaca
     1561 gagcaacgac ggcatgcctc cggtccaggt gttgtgggat tcgacaggcc atacctactg
     1621 ggtacactgg cacatgcttg agatcttggg ctttgaggaa gacattgagg atgtggttga
     1681 cattgatgac cagggggcaa tggtccatgg aggactgggt gtagccccgc cattccagca
     1741 ctggaagccc atagctcagc tctttgccga gccttacgtg gtgcccgagg aggaagacag
     1801 ggaagagaga gagcacttga cccaggccga gtggtgggag ctcttcttct tcatcaagaa
     1861 gttaaacgca gaggaacggc agcacgtggt ggagctcctt caggagttcc tggaggggga
     1921 gcatgttctg gactttgaga tcctgcccga gctgactgta cctgttgagt tggctcagga
     1981 cctgatgctg tctctgcctc aacaacttga tgacagcgct ttgagggacc tgttcaactg
     2041 ctatgtgtac cggaagtacg gccccgaagt cctggtaggg aagcgaaacc gcccgtttgt
     2101 gctagatgac cagcttaacc tattccggat cgaaacggac tctgaagatg aggctggcgc
     2161 tgaagcccaa gatcccccat ctcagagtgc cagccctgcc ctgcggcaac tggtggaggg
     2221 cttgggccca tctgggaagc tccttgtgga cctggagcga gccctcagct ctgaggctcc
     2281 ccaggaaaat gaggtcaagc catgcctgct gcagctgcag gaggagcccc agcccttcct
     2341 cacactcatg cggagtctgg acactccagc cagcaacaag gccctgcacc tgactgcgct
     2401 gagaatcttg atgcagctgg tgaacttccc tgaggcactg ctgcttccct ggcatgaagc
     2461 catggatgcc tgtatgacct gccttcggtc ccccaatact gaccgagagg tgctccagga
     2521 actaatcttt ttcctacacc gcctgacctc cacgagccgg gactatgcgg tgatcctaaa
     2581 ccagctagga gcccgggacg ccatctccaa ggtcctggaa aagcaccgag ggaaactgga
     2641 gttggctcag gagctgcggg acatggtgtt caagtgtgag aagcatgctc acctctaccg
     2701 gaaactcacc acaaatattc tgggcggttg catccagatg gtgctgggcc agattgaaga
     2761 ccacagacga acccaccggc ccatccaaat cccgttcttt gatgtgtttc tcagatatct
     2821 gtgccagggc tccagtgcgg aagtgaagaa aaataagtac tgggagaagg tagaggtgtc
     2881 ctccaaccca caccgggcca gcaggctgac ggaccgcaac gccaagacct actgggagtc
     2941 aaatggcact gccggctccc acttcatcac cgtgcacatg cgcccgggtg tcctcatcag
     3001 gcagctaact ctactggtgg ctggtgagga ctcaagctac atgccagcct gggtggtggt
     3061 gtgtgggggc gacagcatca gctctgttaa tacagaactc aatgcggtga acgtgatgcc
     3121 gcatgctagc cgagtaatcc ttctggagaa tttaacccga ttctggccca tcgtccagat
     3181 ccgaataaag cgctgtcagc agggcggcat taacactcgc atccggggcc tggaggtcct
     3241 gggcccgaag cccaccttct ggccagtgtt ccgagagcag ctgtgccggc acacacgcct
     3301 cttctacatg gttcgtgcac aagcgtggag ccaggacata gctgaggatc gccggagcct
     3361 gctacaccta agttctagac tgaacggggc tctgcggcag gagcagaatt ttgcagatcg
     3421 cttcctccct gatgaggagg ccgcactagc actgagcaag acctgctggg aggcgctggt
     3481 cagccccctg gtgcagaaca tcacctcgcc cgatgaggac agcaccagtt ccttaggctg
     3541 gctgctgaat cagtacctgg agtgcaggga ggctgcctac aatccccaga gccgggccgc
     3601 agctttctcc tcccgggttc gccacctcac ccacctcctg gtccacgtgg agccctgtga
     3661 ggcggcacct ccggtggtgg ccatttccca atccaagggc agaaatagaa gtcatgactg
     3721 gagctccttg accacccgcg gccttccgag cagcatcatg aggaacttga cccgctgctg
     3781 gcggtctgtg gtggaggagc aggtgaacaa gtttctcacc tcatcctgga aagacgacga
     3841 tttcgtaccc cgctactgcg agcgttacta catcctgcag aagtcgagct ctgagctgtt
     3901 cgggccccgg gccgcctttt tgctagcgat gcggaatggc tgtgctgatg ccttgctgag
     3961 gctccctttc ctcagggctg cccatgtgag tgagcagttt gctcggcaca ttgaccagag
     4021 gatccaaggc agccggatgg gcggagcccg gggaatggag atgctggcac agttgcagcg
     4081 atgcctggag tctgtcctga ttttatctcc cctggagata gccaccacct ttgagcatta
     4141 ctaccaacac tacatggctg accgtctcct gagcgtaggc tccagctggc tggagggggc
     4201 cgtgctggag cagatcggtc cctgtttccc cggccgcctc ccccagcaga tgctgcagac
     4261 cctgaacatc tcagaggagc tgcagcgtcg gttccacgtt taccagctcc agcagctcga
     4321 ccaggagctc ctgaagctgg aagacacaga aaagaagatc caggtggccc atgaggacag
     4381 tggcaaggaa cacaagagca agaaggaaga cgctgccgga gagacagcag ctgtggccat
     4441 ggcagacgag gaggaggaag aagggaagaa agaggaggga gaggaggagg aaggggaggg
     4501 agaggaggag ctagaggagg aggaagagcg ctattatgaa gggacaatgc cagaagtgtg
     4561 tgtgcttgtc ctgtctccac gtttctggcc tgttgcctcc gtgtgccata tgctcaatcc
     4621 tacgacatgc ctgccctcgt acctgagggg gaccatcaac cactactcca acttctacag
     4681 caagagtcag agccactctg gcttagagaa ggagtcaccc aggcaactgc agtggacgtg
     4741 gcagggccgg gcagaagtgc agtttggcga tcagattcta catgtgtcca cagtacagat
     4801 gtggctgctg ctgcatctca accatctaaa ggcggtgtct gttgagagcc tgcaggctct
     4861 ctcagagctc cctccggaag tgcttaacaa ggcaatcggg cctctcacct catctcgagg
     4921 ccccttagac cttcaggagc agaagaacat accaggaggg gtgctcaaga ttcgagatga
     4981 tagtgaggaa cccaggccga ggaggggcaa cgtgtggcta atcccacctc agacatacct
     5041 gaaggctgag gatgaggagg gccggaatct ggagaagaga aggaaccttc taaactgcct
     5101 tgttgtccga atcctcaagg ctcatgggga tgaaggcttg cacattgatc agctcgtcca
     5161 tctggtgcta gaagcttggg agaaggggcc atgtcctcct cggggtctgg tcagcagcct
     5221 tggcagggga gcagcgtgca ggagctctga cgtcctctcc tgtatcctgc acctcctggg
     5281 caagggcacg ctgagacgcc atgacgaccg gccacagatg ctgttctatg cagtccctat
     5341 aactgtgatg gagccccaca cggagtccct gaaccctggc tcgtcaggcc ccaatccacc
     5401 cctcaccttc cacaccctgc agattcgatc ccggggtgtg ccttatgctt cttgcactgg
     5461 cacccagacc ttctccactt tccggtag
//
