LOCUS       NM_001002813            1319 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus cathepsin Q-like 2 (Ctsql2), mRNA.
ACCESSION   NM_001002813 XM_579084
VERSION     NM_001002813.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1319)
  AUTHORS   Puente,X.S. and Lopez-Otin,C.
  TITLE     A genomic analysis of rat proteases and protease inhibitors
  JOURNAL   Genome Res 14 (4), 609-622 (2004)
   PUBMED   15060002
REFERENCE   2  (bases 1 to 1319)
  AUTHORS   Sol-Church,K., Frenck,J. and Mason,R.W.
  TITLE     Cathepsin Q, a novel lysosomal cysteine protease highly expressed
            in placenta
  JOURNAL   Biochem Biophys Res Commun 267 (3), 791-795 (2000)
   PUBMED   10673370
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097257.1.
            
            On Jan 9, 2008 this sequence version replaced NM_001002813.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097257.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..1319
                     /gene="Ctsql2"
                     /note="cathepsin Q-like 2"
                     /db_xref="GeneID:408201"
                     /db_xref="RGD:1303225"
     exon            1..8
                     /gene="Ctsql2"
                     /inference="alignment:Splign:2.1.0"
     exon            9..142
                     /gene="Ctsql2"
                     /inference="alignment:Splign:2.1.0"
     CDS             17..1048
                     /gene="Ctsql2"
                     /codon_start=1
                     /product="cathepsin Q-like 2 precursor"
                     /protein_id="NP_001002813.2"
                     /db_xref="GeneID:408201"
                     /db_xref="RGD:1303225"
                     /translation="MTAALFLIILCLGVVSGASAFNLSLDVQWQEWKMKYEKLYSPEE
                     ELLKRVVWEENVKKIELHNRENSLGKNTYIMEINNFADLTDEEFKDMITGITLPINNT
                     MKSLWKRALGSPFPNSWYWRDALPKSIDWRKEGYVTRVREQGKCKSCWAFPVAGAIEG
                     QMFKKTGKLTPLSVQNLVDCSKPQGNKGCRGGTTYNAFQYVLQNGGLESEATYPYKGK
                     EGLCKYNPKNAYAKITRFVALPEDEDVLMDALATKGPVAAGIHVVYSSLRFYKKGIYH
                     EPKCNNRVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKQWGLKGYMKIAKDRNNHCGI
                     ATFAQYPIV"
     exon            143..265
                     /gene="Ctsql2"
                     /inference="alignment:Splign:2.1.0"
     exon            266..445
                     /gene="Ctsql2"
                     /inference="alignment:Splign:2.1.0"
     exon            446..670
                     /gene="Ctsql2"
                     /inference="alignment:Splign:2.1.0"
     exon            671..833
                     /gene="Ctsql2"
                     /inference="alignment:Splign:2.1.0"
     exon            834..948
                     /gene="Ctsql2"
                     /inference="alignment:Splign:2.1.0"
     exon            949..1286
                     /gene="Ctsql2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagaaaggt tgaaatatga ctgctgctct cttcctgatc atcctgtgct tgggagttgt
       61 gtcaggtgct tcagcattta atctcagttt ggatgtccaa tggcaagaat ggaagatgaa
      121 atatgaaaaa ttatacagtc cggaggaaga actcctgaag agagtggtat gggaagaaaa
      181 tgtgaaaaag attgaactgc ataacaggga gaattccttg gggaagaata cctatattat
      241 ggaaataaat aattttgctg acctgactga tgaagaattc aaggacatga taactggtat
      301 tacgttgcca attaacaaca caatgaaaag tctctggaaa cgtgcacttg gtagtccttt
      361 tcctaattct tggtattggc gagatgcttt gcccaaatcc attgattgga gaaaggaagg
      421 ctatgtgact cgtgtgaggg aacagggaaa gtgtaagtct tgttgggctt ttcctgtagc
      481 tggtgccata gaaggacaaa tgttcaagaa aacaggcaaa ctgaccccac tgagtgtcca
      541 gaatcttgtg gactgttcta aacctcaagg caataaaggc tgtcgtggag gtactacata
      601 caatgcattc cagtatgttt tgcaaaatgg aggtttggag tctgaggcaa cctatccata
      661 taaaggaaaa gaaggactat gcaagtacaa tcctaagaat gcatatgcta aaatcacaag
      721 atttgttgct ctcccagaag atgaagatgt cctaatggat gctttagcaa ctaaaggacc
      781 tgttgctgct ggaattcatg ttgtctacag ttctttaagg ttctacaaaa aaggtatata
      841 tcatgagcca aagtgcaaca atcgtgtgaa tcatgcagtt ctcgtggttg gctatggatt
      901 tgagggaaat gaaacagatg gcaataacta ctggctgatc aagaacagct ggggtaaaca
      961 gtggggattg aagggctata tgaagatcgc caaagacagg aacaaccact gtggaattgc
     1021 cacatttgcc caatacccta ttgtgtgaga agcctgatgt cacaagaaag cacgtggcat
     1081 gacactccat ttcctgagca gtaatagcca cttcaatgaa tggcctttga tgagcatgtt
     1141 aaactcttca gttccacaaa atctaccttg taatgtgaat tctgggagct ttcaaatagt
     1201 tgacatgaca ctgtaacttt tgctttaact aatgcgtgct cgtgtttcct tttaatactt
     1261 gtgcaaataa aagcctttaa aaaacaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
