LOCUS       NM_001106649            3643 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus catenin alpha-like 1 (Ctnnal1), mRNA.
ACCESSION   NM_001106649 XM_001059679 XM_216386
VERSION     NM_001106649.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3643)
  AUTHORS   Park B, Nguyen NT, Dutt P, Merdek KD, Bashar M, Sterpetti P,
            Tosolini A, Testa JR and Toksoz D.
  TITLE     Association of Lbc Rho guanine nucleotide exchange factor with
            alpha-catenin-related protein, alpha-catulin/CTNNAL1, supports
            serum response factor activation
  JOURNAL   J Biol Chem 277 (47), 45361-45370 (2002)
   PUBMED   12270917
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474039.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_216386.4, XM_001059679.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3643
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q24"
     gene            1..3643
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /note="catenin alpha-like 1"
                     /db_xref="GeneID:298019"
                     /db_xref="RGD:1311434"
     exon            1..247
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     CDS             110..2305
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /note="catenin (cadherin associated protein), alpha-like
                     1"
                     /codon_start=1
                     /product="alpha-catulin"
                     /protein_id="NP_001100119.1"
                     /db_xref="GeneID:298019"
                     /db_xref="RGD:1311434"
                     /translation="MATSTAPGGGGAGAVHSSNASGLAFDSGLEIRTRSVEQTLLPLV
                     SQITTLINHKDNTKKSDKTLQAIQRVGQAVNLAVGRFVKVGEAIANENWDLKEEISIA
                     CIEAKQAGETIASLTDVTKWNHLESDGQVTILTDKTGVVQAARLLLSSVTKVLLLADQ
                     VVIKQIVTSRNKVLATMERLERVNSFQEFVQIFSQFGNEMVEFAYLTGDRQNDLKDEK
                     KKARMAVARAVLEKGTMMLLTASKTCLRHPSCESAHKNKEGVFDRMRAALEKVIEIVT
                     DCRLNRDTDSSSVSIFTGIKELKLNMEALRENVYFESKENLSAALEVILERVEDFTDS
                     AYTSHEHRERILELSAQARTEVQQFISVWMQAQSRKTKSAAEELELTVLKVSHSLDEL
                     RKELHCTAMQLAADLLKFHADHVVLKALKVTGVEGNLEALAEYACKLSEQKEQLVETC
                     RLLRHVSGTEPLEITCMHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWE
                     SQISDLATLLREISDVFEGRRGEKYDHLSLPKPMKNNANLKSVKSDKPDSEEQAKIAK
                     LGLKLGLLSSDADCEIEKWEDDDNEIVRHGRNMSRMAYSLYLFTRGEGPLKTSQDLIH
                     FLEVFATEGLKLTSSIQSFSKQLKDDDKLMLLLEINKLIPLCHQLQTITKTSLQSKVF
                     LKVDKCVTKIRSMMTLVVQLLSLCYKLLKKMGNDRWVSATNKDAMDGQT"
     exon            248..437
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            438..625
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            626..745
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            746..835
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            836..1006
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            1007..1207
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            1208..1294
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            1295..1453
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            1454..1546
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            1547..1697
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            1698..1735
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            1736..1786
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            1787..1941
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            1942..1990
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            1991..2047
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            2048..2161
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            2162..2245
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
     exon            2246..3643
                     /gene="Ctnnal1"
                     /gene_synonym="Catnal1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cacaagggta ggggtggggc ctcggtgcag cgaggcggca ggcaaccggg aggctggttg
       61 gcgggcgggc agaggtgcgg atagcgcgct ctactatcgg tggcgggcca tggccacttc
      121 tacagccccc ggtggtggcg gtgcgggagc tgtccactcc tccaatgctt ctggcctcgc
      181 cttcgactcg ggactggaga ttagaacgcg ctcggtagag caaactcttc tgcccctggt
      241 ttctcagatt accacactta ttaaccataa agataatacc aaaaagtctg ataagactct
      301 gcaagcgatt cagcgcgtgg gacaagctgt caacttggca gttggaagat ttgttaaagt
      361 aggggaagct atagccaatg aaaactggga tttgaaagaa gaaattagta ttgcctgcat
      421 cgaagctaaa caagcaggag aaacaatcgc ctccctcaca gatgtgacca aatggaacca
      481 tttggagtca gatggtcagg tcacaattct gacagacaaa acaggagtcg tgcaggcggc
      541 cagactgctg ctctcctcag tgacaaaagt gttgctgctg gcagatcagg tagtcatcaa
      601 gcaaatagtg acatcgagaa acaaggttct tgcaaccatg gaaaggctag agagagtaaa
      661 cagctttcag gagtttgttc agatattcag ccagtttgga aacgaaatgg tggagtttgc
      721 atacctaacg ggagacagac aaaatgattt gaaagatgag aagaaaaagg ccagaatggc
      781 tgtggcgagg gcagtgcttg agaagggcac aatgatgctc ctcacagcct caaagacgtg
      841 tctcaggcac cccagctgtg agtcagccca taaaaacaaa gaaggagtgt ttgatcggat
      901 gagagcagcc ctggagaagg tcatcgagat cgtgactgac tgcagactca acagagacac
      961 cgacagctca tctgtcagca tttttactgg tattaaagag ttgaagttga atatggaagc
     1021 tcttcgggag aatgtttact tcgagtccaa ggagaacctt tctgccgcat tggaggtcat
     1081 cttggagcgt gtggaggact tcaccgattc tgcctacacc agccatgagc acagggaacg
     1141 catcttggaa ctgtctgcgc aggcgaggac agaagtgcag cagttcattt ccgtgtggat
     1201 gcaagctcaa agcaggaaga caaagagcgc ggccgaggag ctggaactca ctgtgctgaa
     1261 ggtcagccac agcctggacg agctgaggaa agaactccat tgtacagcca tgcagctggc
     1321 agccgacctg ttaaaattcc atgccgatca tgtggtttta aaagcattaa aagttactgg
     1381 agtagaagga aatttagaag ctttggctga gtatgcctgt aaactctctg agcagaaaga
     1441 acagcttgtt gagacatgtc gactgttgcg gcatgtatcc ggcacagaac ccctcgagat
     1501 aacgtgcatg catgcagagg agacattcca ggtgactggc caacagatca tttctgctgc
     1561 tgaaaccctg acgttgcatc cgtctagcaa aatcgctaaa gaaaacctgg atgtgttttg
     1621 tgaagcgtgg gagtctcaga ttagtgatct ggcaacgctg ctaagagaga tcagtgatgt
     1681 gtttgaagga cgacgaggag agaagtatga ccatctttca cttccaaagc ccatgaaaaa
     1741 taatgcaaac ctgaaatcag tgaagtctga caaacctgat tcagaggagc aagccaagat
     1801 agccaagctt gggctgaagc tgggattgct ttcctccgat gctgactgtg aaatcgagaa
     1861 atgggaagat gacgacaacg agatcgttcg acatggacgg aatatgtcca ggatggccta
     1921 ttctctgtat ttatttacta gaggagaggg gccactgaaa acttcccagg acttaattca
     1981 cttcctggag gtttttgcta cagagggatt aaagcttact tcaagcatac agtctttttc
     2041 aaaacagcta aaagatgatg acaaacttat gcttctcctg gaaataaaca aactaattcc
     2101 tctatgccac cagcttcaga caataaccaa gacatctttg cagagtaaag tgtttctgaa
     2161 ggttgacaag tgtgttacaa agataagatc catgatgact ctcgtggtcc agctcctctc
     2221 cctttgctat aagctactga aaaagatggg aaatgacaga tgggtctctg cgacaaacaa
     2281 agatgccatg gatggtcaaa cctgagcagc ctggggttcg tctctggaat accatgtggt
     2341 acagctgaca ttttaaaaag caaatgatcc tttgtacttt cataagttca tcagtcttta
     2401 aaagaggatg ctgaaatctt tcttttctct gatcttcaga ttagacatgc acgttgctat
     2461 ggtggttgct aagattctaa cggcagtaca gttggaaaac agacactgag ctcaggtgtt
     2521 ctttagcaca caccaaatat cccaagggtc ttaatggcag ctgaattcca aagaagcaat
     2581 tgcaaatgca catcccccag ccccatcggc ttccttaact ggtttttaag ctgattatct
     2641 acaacactaa tttcagcaga aagcagtggc cttgttgaat gcagggtttt cttaggcctg
     2701 gggactcttc ttcagttctt gttgaagcag gataagggtc cctcagagcc tggtcccaga
     2761 tcacacctgc tagcactgtt gcttctaata agtatctcac cggataaggt tgttaggctg
     2821 caacaggagt cactccaaag aaccctggag caacttcaga ggaggagatg gtttttattt
     2881 tagctgtagt atgcgtagct gaccaggcag tcctgagtaa tggatggaat cctaagtatt
     2941 tcttactggt ttaataacac ttcagaacta tcctcagtat tgatgaaatg acagttgcag
     3001 acgatagaac attggaacca agaggctgtg tagatcccag atacctgtat gctgtatttc
     3061 atgtatgtgg aatggaatgc tcattataca ataaatattt ttagtctttt taactttagg
     3121 gtttagacct tttcttgggc tggggaaaca actctgccag taacctgttt gccttgtaag
     3181 ctgtgtaata aagcaaggaa aaggttgccc aggagatcac ccagctgatc tgctagactg
     3241 tagagtatga gaacagggcc gagtgaggga gcgtgtgcag taccagcgtg tagagctctc
     3301 acacctttag ctaccatcag atgccgacat aaccagtctg tcaatggtat aatcttgcag
     3361 gtagctttac agggaatgat tgagtggaac catcttcagt gaaatagaca ggattggtac
     3421 taacgtgtga gtgaaaattc tgtgatttct ttttaaactg agaagcagaa tgctaacttc
     3481 actggattct cagtgttaat aatttagtaa taaagcagct ccctcaccag atatatggca
     3541 acaataccat tatctttaac aacaaaatag gtgtattagt attaaacatc atgggataat
     3601 gtacacgtca ataaaaactg cacattcaaa ctgaattcat act
//
