LOCUS       NM_001100494            1530 bp    mRNA    linear   ROD 29-JUL-2024
DEFINITION  Rattus norvegicus CTD nuclear envelope phosphatase 1 (Ctdnep1),
            mRNA.
ACCESSION   NM_001100494 XM_001079431 XM_001080620
VERSION     NM_001100494.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Tanaka,S.S., Nakane,A., Yamaguchi,Y.L., Terabayashi,T., Abe,T.,
            Nakao,K., Asashima,M., Steiner,K.A., Tam,P.P. and Nishinakamura,R.
  TITLE     Dullard/Ctdnep1 modulates WNT signalling activity for the formation
            of primordial germ cells in the mouse embryo
  JOURNAL   PLoS One 8 (3), e57428 (2013)
   PUBMED   23469192
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Han,S., Bahmanyar,S., Zhang,P., Grishin,N., Oegema,K., Crooke,R.,
            Graham,M., Reue,K., Dixon,J.E. and Goodman,J.M.
  TITLE     Nuclear envelope phosphatase 1-regulatory subunit 1 (formerly
            TMEM188) is the metazoan Spo7p ortholog and functions in the lipin
            activation pathway
  JOURNAL   J Biol Chem 287 (5), 3123-3137 (2012)
   PUBMED   22134922
REFERENCE   3  (bases 1 to 1530)
  AUTHORS   Kim,Y., Gentry,M.S., Harris,T.E., Wiley,S.E., Lawrence,J.C. Jr. and
            Dixon,J.E.
  TITLE     A conserved phosphatase cascade that regulates nuclear membrane
            biogenesis
  JOURNAL   Proc Natl Acad Sci U S A 104 (16), 6596-6601 (2007)
   PUBMED   17420445
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU671232.1 and BC107474.1.
            
            On or before May 22, 2010 this sequence version replaced
            XM_001080620.3, XM_001079431.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CO562928.1, DY318233.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-339               BU671232.1         1-339
            340-1530            BC107474.1         1-1191
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..1530
                     /gene="Ctdnep1"
                     /gene_synonym="Dullard"
                     /note="CTD nuclear envelope phosphatase 1"
                     /db_xref="GeneID:287447"
                     /db_xref="RGD:1310172"
     exon            1..306
                     /gene="Ctdnep1"
                     /gene_synonym="Dullard"
                     /inference="alignment:Splign:2.1.0"
     CDS             205..939
                     /gene="Ctdnep1"
                     /gene_synonym="Dullard"
                     /EC_number="3.1.3.16"
                     /note="serine/threonine-protein phosphatase dullard"
                     /codon_start=1
                     /product="CTD nuclear envelope phosphatase 1"
                     /protein_id="NP_001093964.1"
                     /db_xref="GeneID:287447"
                     /db_xref="RGD:1310172"
                     /translation="MMRTQCLLGLRTFVAFAAKLWSFFIYLLRRQIRTVIQYQTVRYD
                     ILPLSPLSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKH
                     PVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQH
                     CTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLL
                     PMLDALRFTADVRSVLSRNLHQHRLW"
     exon            307..373
                     /gene="Ctdnep1"
                     /gene_synonym="Dullard"
                     /inference="alignment:Splign:2.1.0"
     exon            374..492
                     /gene="Ctdnep1"
                     /gene_synonym="Dullard"
                     /inference="alignment:Splign:2.1.0"
     exon            493..564
                     /gene="Ctdnep1"
                     /gene_synonym="Dullard"
                     /inference="alignment:Splign:2.1.0"
     exon            565..681
                     /gene="Ctdnep1"
                     /gene_synonym="Dullard"
                     /inference="alignment:Splign:2.1.0"
     exon            682..793
                     /gene="Ctdnep1"
                     /gene_synonym="Dullard"
                     /inference="alignment:Splign:2.1.0"
     exon            794..878
                     /gene="Ctdnep1"
                     /gene_synonym="Dullard"
                     /inference="alignment:Splign:2.1.0"
     exon            879..1508
                     /gene="Ctdnep1"
                     /gene_synonym="Dullard"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccagtccc ccagttcccg gttccgctgg gctttccctt tgctgggggt ggctttctga
       61 gccacccact ccgtgctcat ctctgcagcc tctcctgccg ctcggggccc ccgttccccc
      121 tccctgcggc ggggggctgc ccccgggggg ctggcggagc tgggccgcgg gggccccggg
      181 gccggcggtg ccggggtcat cgggatgatg cggacgcagt gtctgctggg gctgcgcacg
      241 ttcgtggcct tcgccgccaa gctctggagc ttctttattt accttttgcg gaggcagatc
      301 cgcacggtaa ttcagtatca aactgttcga tatgatatcc ttcccttatc tcctttgtcc
      361 cggaatcgac tagcccaggt gaagaggaag atcctggtgc tggatctgga tgaaaccctt
      421 attcattctc accacgatgg ggtcctgagg cctacagtga ggcctggaac acctcctgat
      481 ttcatcctga aggtggtaat agacaaacat cctgtccggt tttttgtaca taagagaccc
      541 catgtggatt tcttcttaga agtggtaagc cagtggtatg agcttgtggt gtttacagca
      601 agcatggaaa tttatggctc tgctgtggca gataaactgg acaatagcag aagcattctt
      661 aagaggagat actacagaca gcactgcact ttggagttgg gcagctacat caaagacctc
      721 tctgtggtcc acagtgacct ttccagcatc gtgatcctgg acaactcccc tggggcttac
      781 aggagccacc cagacaatgc catccccatc aaatcctggt tcagtgaccc cagtgacaca
      841 gcccttctca accttctccc aatgttggac gccctcaggt tcactgctga tgtccgatcg
      901 gtgctgagcc gaaaccttca ccaacatagg ctctggtgac agctgctccc cctccacctg
      961 agttggggtg gaggggaaag ggagggagaa ctcttcggac ggccgtctgt agccctgtcc
     1021 agtgtgagga ctgcctgggc agagtctgct cctcccgccc ctctctgccc tgggagccct
     1081 acactccgct tacggagtca ggatggacac atgggccaga ctgtgaagca gcctcactct
     1141 ttgtgttcac actccgtgga aatgccagac tgggacaggc gaaggcctag gggaaccgaa
     1201 accgtctggt gaagaggcag gactggccag agtgacagac atatcccaga ggctcaaaag
     1261 aagccaattc aactttgttg tgatttgatt ttttaaaaac tcttatacaa aactgatcta
     1321 attcttcact cctgctccaa gggctgggct gtgggtgggg actgggattt cgggccactg
     1381 gatcttcctc agtcttgtcc cttccttact tttcctcatt ttttttcttt ccccaacccc
     1441 ccaatacctg taatcagctc ctttcttcct tcctctttta aaccatgcat tataactttg
     1501 aaaccaaaaa aaaaaaaaaa aaaaaaaaaa
//
