LOCUS       NM_001109322             789 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus cancer/testis antigen 2 (Ctag2), mRNA.
ACCESSION   NM_001109322 XM_001056953 XM_577050
VERSION     NM_001109322.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 789)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474019.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001056953.1, XM_577050.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq36"
     gene            1..789
                     /gene="Ctag2"
                     /gene_synonym="RGD1561702"
                     /note="cancer/testis antigen 2"
                     /db_xref="GeneID:501655"
                     /db_xref="RGD:1561702"
     exon            1..369
                     /gene="Ctag2"
                     /gene_synonym="RGD1561702"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..643
                     /gene="Ctag2"
                     /gene_synonym="RGD1561702"
                     /codon_start=1
                     /product="cancer/testis antigen 2"
                     /protein_id="NP_001102792.1"
                     /db_xref="GeneID:501655"
                     /db_xref="RGD:1561702"
                     /translation="MQDPSGDKVCRAGGEEEGEDGQHTSRVHDTEANLNRSEVESGHD
                     NTPRVNRVRDFDSQAAPGSLSSRSAIEARLVVEEAAIAPQAEQPPIIPGPSGDAATTA
                     GSRLLEFSVTVPFRTAVEANIACRTLASNVQHQQVMVQQEFTVNDTILTVRWTTEDPV
                     LFRASINNFLDHLSLVMRTIPRPVFIAVVKQGRGRNNEV"
     exon            370..498
                     /gene="Ctag2"
                     /gene_synonym="RGD1561702"
                     /inference="alignment:Splign:2.1.0"
     exon            499..789
                     /gene="Ctag2"
                     /gene_synonym="RGD1561702"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtagtattac aagggaactc tgggtggata agcacactta accatgcagg atcccagtgg
       61 ggacaaagtt tgtagagcag gtggtgaaga agaaggggag gatggacagc acacatccag
      121 agttcatgac actgaagcta acttgaatcg ttctgaagtg gagagtggcc atgataacac
      181 tcctcgtgta aatcgtgtac gtgattttga tagtcaggct gccccaggta gcctcagctc
      241 aaggagtgct atagaagcaa gactggtagt ggaagaagca gccatagctc ctcaggctga
      301 gcagccacca attatcccgg gacctagtgg agatgctgca acaacagctg gaagccgact
      361 cttggaattt tctgtaacag tgccgttccg gaccgccgtg gaggcaaaca ttgcatgcag
      421 aaccctggcc tcaaatgtcc agcaccagca agtgatggtt cagcaggagt tcactgtgaa
      481 tgacactatt ctcactgtta ggtggaccac tgaagatcct gttctcttcc gagcatccat
      541 caataacttc ctagaccacc tttcacttgt gatgaggacc atcccacgcc cagtgtttat
      601 agctgttgtc aaacaaggaa gaggaagaaa taatgaagtc tagtatgtta acacccacaa
      661 cacaaggaaa aggcatttca taatttggga aactattgct ttgccttcat attcactgtt
      721 ttgatgctat cacactgtat ctatcagtca gtgttattgg aggagtgaat attgaaaaat
      781 aggataaag
//
