LOCUS       NM_001013918            1598 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus centriolar satellite-associated tubulin
            polyglutamylase complex regulator 1 (Cstpp1), mRNA.
ACCESSION   NM_001013918 XM_238272
VERSION     NM_001013918.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087159.1.
            
            [WARNING] On May 2, 2024 this sequence was replaced by
            NM_001013918.2.
            
            On Apr 1, 2005 this sequence version replaced XM_238272.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087159.1, FQ212395.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..1598
                     /gene="Cstpp1"
                     /gene_synonym="RGD1309540"
                     /note="centriolar satellite-associated tubulin
                     polyglutamylase complex regulator 1"
                     /db_xref="GeneID:295930"
                     /db_xref="RGD:1309540"
     exon            1..64
                     /gene="Cstpp1"
                     /gene_synonym="RGD1309540"
                     /inference="alignment:Splign:2.1.0"
     CDS             19..1014
                     /gene="Cstpp1"
                     /gene_synonym="RGD1309540"
                     /note="UPF0705 protein C11orf49 homolog"
                     /codon_start=1
                     /product="centriolar satellite-associated tubulin
                     polyglutamylase complex regulator 1"
                     /protein_id="NP_001013940.1"
                     /db_xref="GeneID:295930"
                     /db_xref="RGD:1309540"
                     /translation="MLSPERLALPDYEYLAQRHVLTYMEDAVCQLLENKEDISQYGIA
                     RFFTEYFNSVCQGTHILFREFSFIQATPHNRASFLRAFWRCFRTVGKNGDLLTMREYH
                     CLLQLLCPDFPLELTQKAARIVLMDDAMDCLMSFSDFLFAFQIQFYYSEFLESVAAIY
                     QDLLSGKNPNTVIVPTSSSGQHRQRPALGDAGMLDGVEASLFCQRLENLCDRHKYSCP
                     PPALVKEILSNVQRLTFYGFLVALSKHHGINQALGALPDKGDLMHDPAMDEELERLLV
                     QVPGLVNSITATSEASCLPSRTPPRVGSPWKPLHRSRKLDAESDGSTEETDESET"
     exon            65..167
                     /gene="Cstpp1"
                     /gene_synonym="RGD1309540"
                     /inference="alignment:Splign:2.1.0"
     exon            168..298
                     /gene="Cstpp1"
                     /gene_synonym="RGD1309540"
                     /inference="alignment:Splign:2.1.0"
     exon            299..383
                     /gene="Cstpp1"
                     /gene_synonym="RGD1309540"
                     /inference="alignment:Splign:2.1.0"
     exon            384..469
                     /gene="Cstpp1"
                     /gene_synonym="RGD1309540"
                     /inference="alignment:Splign:2.1.0"
     exon            470..665
                     /gene="Cstpp1"
                     /gene_synonym="RGD1309540"
                     /inference="alignment:Splign:2.1.0"
     exon            666..775
                     /gene="Cstpp1"
                     /gene_synonym="RGD1309540"
                     /inference="alignment:Splign:2.1.0"
     exon            776..839
                     /gene="Cstpp1"
                     /gene_synonym="RGD1309540"
                     /inference="alignment:Splign:2.1.0"
     exon            840..1572
                     /gene="Cstpp1"
                     /gene_synonym="RGD1309540"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaactacccg gtcaaaggat gctgagtccc gagcgcctag ctctaccgga ctacgagtat
       61 ctggctcagc gacatgtcct cacgtacatg gaggatgcag tgtgtcagct gctagagaac
      121 aaggaggata ttagccagta tggcattgcc cggttcttca ctgaatattt taacagcgta
      181 tgccaaggaa ctcacattct cttccgggaa ttcagcttta tacaagccac acctcacaat
      241 agggcatcat tccttcgggc cttctggaga tgcttccgaa ccgtaggcaa aaatggcgac
      301 ctgctgacca tgagggagta ccactgtctg ctgcagttat tatgcccaga cttcccgctc
      361 gagctcactc agaaagcagc caggattgtg ctcatggatg atgccatgga ctgcttgatg
      421 tctttctcag atttcctctt tgccttccag atccagtttt attactcaga atttctggag
      481 agtgtggctg ccatctatca ggacttactg tcagggaaaa accccaatac agtgattgtc
      541 ccaacatcat cgagtgggca acaccgccaa cgacccgcct tgggtgatgc tggcatgctg
      601 gatggagtgg aagcatcact gttctgtcag cgcctggaaa acctatgtga ccggcacaag
      661 tacagctgtc caccaccagc acttgtcaaa gagatcctga gcaatgtcca gaggctgact
      721 ttctatggat tccttgtggc tctctcaaag catcatggga tcaaccaagc cctaggagct
      781 ttgcctgaca aaggagacct gatgcatgac ccagccatgg atgaggagct ggaacggctg
      841 ctggtccagg tcccaggcct ggtcaactcc atcactgcca cttctgaggc cagctgcctg
      901 ccttcccgaa cccctccccg ggttggttcc ccatggaaac ccctccatcg ctcccgcaaa
      961 ttggatgcag agagcgatgg ctccactgaa gagacagatg agtccgagac ttgaatctga
     1021 agggtcccat ctgtggcctg taccttgttc ccaccctgct cttgccgctc tcaccagact
     1081 tctcccacat cactatgcgg ccctctgctg gagagaatgg tgaataacag tcctcataag
     1141 accagcctag ttcaataatc ccagagatcc tctaactcat gctctaagca accttttggt
     1201 ccctaaactg acatgctgtc ccacaggcca cttcagcaca gggaagagtg ttggctttag
     1261 tcttgttggc agagctgctt atgctttacg tacagtgttg tctcagccag cccatgatcc
     1321 tcctagtaag ggtaattttt cacagctcct ttagaaggga aacatgaatt agtaatgcag
     1381 ggtcttcatg gtggagggtg actcctgaga gcatgtgctg ggaagacgta tcaactggcc
     1441 ttctgctgga gtgatcagtc actagctgga ataagaggga ggatgggcaa gaatttcact
     1501 tttaaaatct gcttcaagtt tgtatcaaat agtcaaatct gttaaatgaa taaagtccct
     1561 tgtgtctggt aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
