LOCUS       NM_017148               1720 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus cysteine and glycine-rich protein 1 (Csrp1),
            mRNA.
ACCESSION   NM_017148
VERSION     NM_017148.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Knierim,E., Hirata,H., Wolf,N.I., Morales-Gonzalez,S.,
            Schottmann,G., Tanaka,Y., Rudnik-Schoneborn,S., Orgeur,M.,
            Zerres,K., Vogt,S., van Riesen,A., Gill,E., Seifert,F., Zwirner,A.,
            Kirschner,J., Goebel,H.H., Hubner,C., Stricker,S., Meierhofer,D.,
            Stenzel,W. and Schuelke,M.
  TITLE     Mutations in Subunits of the Activating Signal Cointegrator 1
            Complex Are Associated with Prenatal Spinal Muscular Atrophy and
            Congenital Bone Fractures
  JOURNAL   Am J Hum Genet 98 (3), 473-489 (2016)
   PUBMED   26924529
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Frobel,J., Cadeddu,R.P., Hartwig,S., Bruns,I., Wilk,C.M.,
            Kundgen,A., Fischer,J.C., Schroeder,T., Steidl,U.G., Germing,U.,
            Lehr,S., Haas,R. and Czibere,A.
  TITLE     Platelet proteome analysis reveals integrin-dependent aggregation
            defects in patients with myelodysplastic syndromes
  JOURNAL   Mol Cell Proteomics 12 (5), 1272-1280 (2013)
   PUBMED   23382103
REFERENCE   3  (bases 1 to 1720)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (bases 1 to 1720)
  AUTHORS   Kuo,J.C., Han,X., Hsiao,C.T., Yates,J.R. 3rd and Waterman,C.M.
  TITLE     Analysis of the myosin-II-responsive focal adhesion proteome
            reveals a role for beta-Pix in negative regulation of focal
            adhesion maturation
  JOURNAL   Nat Cell Biol 13 (4), 383-393 (2011)
   PUBMED   21423176
REFERENCE   5  (bases 1 to 1720)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   6  (bases 1 to 1720)
  AUTHORS   Kwitek,A.E., Gullings-Handley,J., Yu,J., Carlos,D.C., Orlebeke,K.,
            Nie,J., Eckert,J., Lemke,A., Andrae,J.W., Bromberg,S., Pasko,D.,
            Chen,D., Scheetz,T.E., Casavant,T.L., Soares,M.B., Sheffield,V.C.,
            Tonellato,P.J. and Jacob,H.J.
  TITLE     High-density rat radiation hybrid maps containing over 24,000
            SSLPs, genes, and ESTs provide a direct link to the rat genome
            sequence
  JOURNAL   Genome Res 14 (4), 750-757 (2004)
   PUBMED   15060019
REFERENCE   7  (bases 1 to 1720)
  AUTHORS   Wu,R.R. and Couchman,J.R.
  TITLE     cDNA cloning of the basement membrane chondroitin sulfate
            proteoglycan core protein, bamacan: a five domain structure
            including coiled-coil motifs
  JOURNAL   J Cell Biol 136 (2), 433-444 (1997)
   PUBMED   9015313
REFERENCE   8  (bases 1 to 1720)
  AUTHORS   McLaughlin,C.R., Tao,Q. and Abood,M.E.
  TITLE     Isolation and developmental expression of a rat cDNA encoding a
            cysteine-rich zinc finger protein
  JOURNAL   Nucleic Acids Res 22 (24), 5477-5483 (1994)
   PUBMED   7816640
REFERENCE   9  (bases 1 to 1720)
  AUTHORS   Wang,X., Ray,K., Szpirer,J., Levan,G., Liebhaber,S.A. and
            Cooke,N.E.
  TITLE     Analysis of the human cysteine-rich protein gene (CSRP), assignment
            to chromosome 1q24-1q32, and identification of an associated MspI
            polymorphism
  JOURNAL   Genomics 14 (2), 391-397 (1992)
   PUBMED   1385304
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC062407.1.
            
            On Jan 1, 2004 this sequence version replaced NM_017148.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC062407.1, U09567.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q13"
     gene            1..1720
                     /gene="Csrp1"
                     /gene_synonym="Csrp"
                     /note="cysteine and glycine-rich protein 1"
                     /db_xref="GeneID:29276"
                     /db_xref="RGD:62053"
     exon            1..38
                     /gene="Csrp1"
                     /gene_synonym="Csrp"
                     /inference="alignment:Splign:2.1.0"
     exon            39..151
                     /gene="Csrp1"
                     /gene_synonym="Csrp"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..621
                     /gene="Csrp1"
                     /gene_synonym="Csrp"
                     /note="cysteine rich protein 1; CRP; CRP1; Csrp 1"
                     /codon_start=1
                     /product="cysteine and glycine-rich protein 1"
                     /protein_id="NP_058844.1"
                     /db_xref="GeneID:29276"
                     /db_xref="RGD:62053"
                     /translation="MPNWGGGKKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNL
                     DSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSMDKGESLGIKHEEAPGHRPTT
                     NPNASKFAQKIGGSERCPRCSQAVYAAEKVIGAGKSWHKSCFRCAKCGKGLESTTLAD
                     KDGEIYCKGCYAKNFGPKGFGFGQGAGALVHSE"
     exon            152..320
                     /gene="Csrp1"
                     /gene_synonym="Csrp"
                     /inference="alignment:Splign:2.1.0"
     exon            321..450
                     /gene="Csrp1"
                     /gene_synonym="Csrp"
                     /inference="alignment:Splign:2.1.0"
     exon            451..544
                     /gene="Csrp1"
                     /gene_synonym="Csrp"
                     /inference="alignment:Splign:2.1.0"
     exon            545..1680
                     /gene="Csrp1"
                     /gene_synonym="Csrp"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagtgctgt cgcccgtgcg cctcctagca gctgccagaa tgccaaactg gggaggaggc
       61 aagaaatgcg gggtgtgcca gaagacagtc tactttgctg aggaggtcca gtgcgagggc
      121 aacagcttcc acaaatcctg cttcctgtgc atggtttgca agaagaatct ggacagcacc
      181 actgtggcag tgcatggaga agagatctat tgcaagtcat gttatggcaa gaagtatgga
      241 ccaaaaggct acggctacgg gcagggtgca ggcacgctga gcatggacaa gggggagtct
      301 ctgggcatca agcatgagga agcccccgga cacaggccta ccaccaaccc caatgcatcc
      361 aagtttgctc agaagatcgg cggctctgag cgctgtccgc gatgcagcca ggcagtctat
      421 gcagcggaga aggtgatcgg tgccgggaag tcctggcata agtcctgctt ccgatgtgcc
      481 aaatgtggca aaggcctcga gtcgaccacc ctggcagaca aggatggtga gatctattgc
      541 aaaggatgct atgccaaaaa ctttgggccc aaaggttttg gctttggaca aggagctggc
      601 gccttggtcc attcagagtg aggctgccgc ctgcgtaccc tgcctactcc tgcactctca
      661 taagcagtcc gttcctggaa gccatggaca cctccaagat cctctctctc actcagccct
      721 gctgcacatc actaatgcct tggacttggg tgttctttgg cttaggggtc tgcctgagtt
      781 ccttccccac taagggcttc ctcctgcctg gcattcgata cccttatctt taggagacat
      841 ctgtctagtc accccttccc agataccagg tccctctccc cacaccttac ccctacagac
      901 ctctgtggcc aggacactct ctactggcca ggacacctga ccccacatct ttggagccca
      961 aaagagcaag gcggaagacc tgcgctaggg aaggctgtgg tttattgtat cccagagtct
     1021 ctctctgggt aggatgctga gcttcttggt gcctctcagt ctgggaagtc cccgtgagag
     1081 gcagagaggt gcggatagga ttgtggggtc atcagaagga gcttgttctc tgacctcttg
     1141 cctttgaatg tggaaataat aacttttcac ttagggatga agaagaacgc aggtcagagg
     1201 accccaaaat ctagaggttg cctgacctca agttccctgt tccatgggca agggagagcc
     1261 taatgaatac cttgaacaag cattgacatg gatcagtggt ccagatctta gagtggtcag
     1321 ttctggttct aagcttgggt ctggtggctg ggatggacag cttctgttgc agcatagccc
     1381 agggtagagc tgtgttctag ccactcctga gggtcctccg aaccccagtc ctcctctcca
     1441 acccagaccc ttcgttcacc ccacctttct ctagtaaacc ttcgctccct tgcccatccc
     1501 ttccaggccc caaggtcagg agcagaggga gggaggggaa gagctgggcc ttaatgctcc
     1561 tggggatggg gacggggaca gaagggacaa ggctgtgtac agctatttgc tgcaagggct
     1621 gtaggcatgg gctgttgaag ctgatttatc atctgatcaa taaagcaatt tagaactgaa
     1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
