LOCUS       XM_006245490            3057 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus component of Sp100-rs (Csprs),
            transcript variant X1, mRNA.
ACCESSION   XM_006245490
VERSION     XM_006245490.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006245490.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006245490.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3057
                     /gene="Csprs"
                     /note="component of Sp100-rs; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 59 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:316579"
                     /db_xref="RGD:1310830"
     CDS             462..1352
                     /gene="Csprs"
                     /codon_start=1
                     /product="olfactory receptor 11G2"
                     /protein_id="XP_006245552.1"
                     /db_xref="GeneID:316579"
                     /db_xref="RGD:1310830"
                     /translation="MNSSSEHCNISDWLRLEATVKASVYVVAFSVATSITVVIIATVS
                     QSLQLREEVRLVLLCHHSLCVSSYCGLGVVFQGMRAFLANSPLLLCWLVFGAQLSVGE
                     GILLTLTLMALNTYLGICYPLRSPSLVDSAKYRILAGTWTTVILKNAGLFLIEGTSPP
                     PASVFQSAPLCPVILNGTPARVIGMFSLAFPLSVILVSYCLIYREGKRAGHFNRSNVK
                     ARRTVLVHLLQISLHVIPTLIFVGLGKRCGVFFFALNLVLFGIFAFAQCFNPLVYGLH
                     NRDLRSRLYPWLCCQKKLLA"
ORIGIN      
        1 cggtgttcat tgtcaaatgg ggacttgggg gagggtggat ctttttcttt aaaaaaatgc
       61 ttattatcta tattttacat tgttttggac aacatgttac ttgaacaact tcagagagaa
      121 aggccatgcc tctgagggaa agctgctaac aaatgctggt gggtttctag cagaggtgtt
      181 ggcaagagag aagtactggc catgttttac agaagccaga actgcctttc tcttgcccct
      241 gttacaacat ctccattgta gttcccttgt ggggaagtca tttcagcctt ccccagggac
      301 acctttcttg ttctttatac accacggagt gtgtctggag cctggaaagg acacagaggc
      361 cgtgtacatc atcagaggga caggaatgca gaagttaagt gaaggagggg ctcggtctgc
      421 cacttccttg gacagaagga gccaagccag cccggaagac catgaactca tcttctgagc
      481 attgcaacat atctgactgg ctgaggctag aggcaaccgt gaaggcctct gtgtacgtgg
      541 tggctttctc agtcgccaca tcgatcaccg ttgtcattat cgcaacggtg tcacagagtc
      601 tgcagctgag ggaagaggtg cggctggtcc tcctctgcca tcactcgctt tgtgtctcct
      661 cctactgtgg cctgggggtt gtcttccaag gaatgcgggc cttcctagcc aacagccccc
      721 tcctgctgtg ctggctggta tttggggcac agctaagtgt gggagaaggg atcctcctca
      781 ctctgaccct gatggctctg aatacttacc tcggtatttg ttatccgctg aggtctccat
      841 ccttggtgga ttctgctaag tacaggattc tagctgggac gtggaccacg gttatactca
      901 agaatgctgg tttattcctc atagagggta caagccctcc gccagcttct gttttccagt
      961 ctgccccgct ctgtcccgtg attttgaatg ggacgcctgc cagagtcatc ggcatgtttt
     1021 ccctcgcctt tcctttatcc gtcattcttg tgagttactg cctgatatac cgagaaggga
     1081 agcgggctgg ccattttaac aggtcaaacg tcaaggcccg gagaactgtc cttgttcatc
     1141 tactgcagat aagcttacac gtgataccca ccctgatctt tgtaggtttg ggaaaacggt
     1201 gcggggtgtt tttctttgct ttaaatctgg tgctttttgg tatcttcgct tttgcgcaat
     1261 gtttcaaccc tctggtctac gggctccaca acagagacct gcggagcaga ctgtaccctt
     1321 ggctatgctg ccagaagaag ctgctggctt aaaaaggagg ggctggctta aacaaaaatt
     1381 cagctcttcg gagtaactcc aggcttaatg ggtgtgttag ttaggactgg ggacttatat
     1441 taaactcaaa accgttgcct tgatttgatt ttgaaagtgc tgcagacttc tctgttgtgc
     1501 ctcagtaaga tcagttagtg cctttaactc taaacccaga tgagtctgcc ttactgcaga
     1561 caaagcacaa agtacaggaa tcacgtggtt atgaagtcac tggataggct agaggaaacg
     1621 gaagtcaggg atcctgctga ttggcatcaa ggacagaccc agcagccatg gactgtggag
     1681 gtcacatggg ccaagtagct gtaggcactg gacgctcaca tcttgtcaac tttgtcggcc
     1741 aggagaaaca gcaacatgat gtcttctacc tccttccaac gtctgtatgt tacatattcg
     1801 cctgtaattg gtggaaccta actgcctact gggaccctta aaagcaaagg agtctgggaa
     1861 atgtagttct tagtgttact gatttggcac tgtggaaagt tgccttacta ggggaaatga
     1921 gtgagaactg aatgagcaac ccaagggccc ctcttattac acatagtttt cttttgtttt
     1981 ttcctctttt ttcttttttt ttttccggag ctggggaccg aacccagggc cttgctcttg
     2041 ctaggcaagc gctctaccac tgagctaaat ccccaacccc acacatagtt ttatttacag
     2101 attataatta tatcagagat ggtaggcact attgggcatt gcattcccca cactctgaag
     2161 ccatttacac tacaacaaat cctcacaaca attttacaat tgctcttgat ttacaaatgg
     2221 gaaaaagtgg ggttgagaaa agacttacat gagcttagga ggctctaaat cttacaattc
     2281 tcataacttt ctttgtattt ttttggtaca gaataaccac ttatcttaaa aaatcatact
     2341 tttaatatgg gttcttaatt taacctccct tctagcccac caccacccat cagagatagt
     2401 ggaaaagaac ggttattggg atacgagggc agtggacttg tttagaaatt gttctttgga
     2461 gcaaatctca tttacgttgt caggaaatca gcagttcaat tcacaggaat cagcagcggc
     2521 ggcttgatcc attcgcaaac acttcatgaa ctacctacca gtcggtagtg tcaggaaaac
     2581 aaacatgacc cagcactggt ggcataacct agcagagaca gccagtcctc agatgaattg
     2641 gcacaagtca gaaggaggaa ccaggactac cagagacacc aggagaagtt ctttgctgtg
     2701 cctctttcaa tgaaactaag aacagtgaag actcaagacc aagaagtgtt gcaaagctgg
     2761 ctgtgcaagc aagccaagcc cccgtcactg tctgttgagt cctatttatg ctccctccaa
     2821 acattatgtg ccctccacgg gtcttgcctc accatgtatc ttacctcagc atgtgcgtct
     2881 gtcttagcaa aaatccacat gagtatgtat cagctgacat cactctgcca gttggctgga
     2941 gtccacagaa gtagcaagaa gcttctagca caccactaga agttttctgg tgtgtttttc
     3001 tctatggagt ctggacagtg atcaataaac aatggcaagg tgtaccaata ccatcca
//
