LOCUS       NM_001033870            2405 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus casein kinase 1, gamma 2 (Csnk1g2), transcript
            variant 1, mRNA.
ACCESSION   NM_001033870
VERSION     NM_001033870.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Chia,R., Haddock,S., Beilina,A., Rudenko,I.N., Mamais,A.,
            Kaganovich,A., Li,Y., Kumaran,R., Nalls,M.A. and Cookson,M.R.
  TITLE     Phosphorylation of LRRK2 by casein kinase 1alpha regulates
            trans-Golgi clustering via differential interaction with ARHGEF7
  JOURNAL   Nat Commun 5, 5827 (2014)
   PUBMED   25500533
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   3  (bases 1 to 2405)
  AUTHORS   Zhai,L., Graves,P.R., Robinson,L.C., Italiano,M., Culbertson,M.R.,
            Rowles,J., Cobb,M.H., DePaoli-Roach,A.A. and Roach,P.J.
  TITLE     Casein kinase I gamma subfamily. Molecular cloning, expression, and
            characterization of three mammalian isoforms and complementation of
            defects in the Saccharomyces cerevisiae YCK genes
  JOURNAL   J Biol Chem 270 (21), 12717-12724 (1995)
   PUBMED   7759525
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC072533.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC072533.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2405              BC072533.1         1-2405
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..2405
                     /gene="Csnk1g2"
                     /note="casein kinase 1, gamma 2"
                     /db_xref="GeneID:65278"
                     /db_xref="RGD:621407"
     exon            1..217
                     /gene="Csnk1g2"
                     /inference="alignment:Splign:2.1.0"
     exon            218..645
                     /gene="Csnk1g2"
                     /inference="alignment:Splign:2.1.0"
     CDS             459..1706
                     /gene="Csnk1g2"
                     /EC_number="2.7.11.1"
                     /note="isoform 1 is encoded by transcript variant 1;
                     CKI-gamma 2; casein kinase I"
                     /codon_start=1
                     /product="casein kinase I isoform gamma-2 isoform 1"
                     /protein_id="NP_001029042.1"
                     /db_xref="GeneID:65278"
                     /db_xref="RGD:621407"
                     /translation="MDFDKKGGKGELEEGRRMSKTGTNRSNHGVRNSGTSSGVLMVGP
                     NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSTTEGV
                     PQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKS
                     LIYRDVKPENFLVGRPGSKRQHSIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY
                     MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI
                     EVLCESFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGYVFDYEYDWAGKPL
                     PTPIGTVHPDVPSQPPHRDKAQLHTKNQALNSTNGELNTDDPTAGHSNAPIAAPAEVE
                     VADETKCCCFFKRRKRKSLQRHK"
     exon            646..686
                     /gene="Csnk1g2"
                     /inference="alignment:Splign:2.1.0"
     exon            687..756
                     /gene="Csnk1g2"
                     /inference="alignment:Splign:2.1.0"
     exon            757..905
                     /gene="Csnk1g2"
                     /inference="alignment:Splign:2.1.0"
     exon            906..1140
                     /gene="Csnk1g2"
                     /inference="alignment:Splign:2.1.0"
     exon            1141..1226
                     /gene="Csnk1g2"
                     /inference="alignment:Splign:2.1.0"
     exon            1227..1311
                     /gene="Csnk1g2"
                     /inference="alignment:Splign:2.1.0"
     exon            1312..1460
                     /gene="Csnk1g2"
                     /inference="alignment:Splign:2.1.0"
     exon            1461..1544
                     /gene="Csnk1g2"
                     /inference="alignment:Splign:2.1.0"
     exon            1545..1651
                     /gene="Csnk1g2"
                     /inference="alignment:Splign:2.1.0"
     exon            1652..2376
                     /gene="Csnk1g2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgctggcggc gtaaggcgcg cgggggctcc gcggagcggg cgcgggggag cggcggagcc
       61 cggccctctc cgccgaacat gccgaggccg gcccctgtag cgcgggagcc ggagcggggg
      121 cgggagccgg agcgcgaacg tgcgcggggc ccggagcggg ggacgccgcg ctgctgagct
      181 cggccaccgc cgcccgcggg ccccaggcgg ggcgcagctg ggcaccacga gatttaaggc
      241 ggtgggacct gttggcagaa tgtcttctct ctctgcaagt gaccctgagg ccaccaagat
      301 gagcacctcg gccgggcctg tgagcgtacc cgggtgtcaa tagccgggag ccaaggggcc
      361 accaggcgca atggtgtact aggccgggcg cgagctcagg tttcgcactc ggatctcacg
      421 gcagagtcac cgtggagagg ccagggtacc acaaacttat ggattttgac aagaaaggag
      481 ggaaggggga gttggaggag ggcaggagaa tgtccaaaac cggcacgaat cggagcaacc
      541 acggcgtccg caattcgggg accagctcag gggtcctgat ggtgggcccc aacttccgag
      601 tcggcaagaa gataggctgt gggaatttcg gggagcttcg cctaggaaag aacctgtata
      661 caaatgagta cgtggctatc aaactggagc ccatcaagtc ccgggccccg cagctgcatc
      721 tggagtaccg cttctacaag cagctcagca ccacagaagg tgtccctcag gtctactact
      781 tcggcccttg cgggaagtac aacgccatgg tgctggagct gctggggccc agcctggagg
      841 acctgttcga cctgtgcgac cgcaccttca cgctaaagac ggtgctgatg atcgccatcc
      901 agctgatcac gcgcatggag tatgtgcata ccaagagcct catctaccgc gacgtgaagc
      961 ctgagaactt cctggttggg cggccgggca gcaagcggca gcactccatc cacatcatcg
     1021 actttggcct ggccaaggag tacatcgacc ctgagaccaa gaagcacatc ccgtaccgcg
     1081 agcacaagag cctgacgggc acggcgcgct acatgagcat caacacgcac ctgggcaagg
     1141 agcagagccg ccgggacgac ctggaagcgc tagggcacat gttcatgtac ttcctacgcg
     1201 gcagtctgcc ctggcagggg ctcaaggcgg acacgctgaa ggaacgctac cagaagattg
     1261 gtgataccaa gcgtgccacg ccaatcgagg tgctgtgtga gagcttcccg gaggagatgg
     1321 ccacctactt gcgctatgtg cggcgcctag acttctttga gaagccagac tacgactacc
     1381 tgaggaagct cttcaccgac ctcttcgacc gcagcggcta cgtgtttgac tacgagtatg
     1441 actgggccgg caagcccctg ccgacaccta tcggcaccgt ccatcctgat gtgccctccc
     1501 agccgccaca tcgtgacaaa gctcagctcc acaccaagaa ccaggcgctg aactccacca
     1561 atggagagct gaacacagac gaccccaccg cgggccactc caacgccccc atcgcggccc
     1621 ctgcagaagt agaggtggcg gatgaaacca agtgctgctg cttcttcaag aggaggaaga
     1681 gaaaatcgct gcagcgacat aagtgagggt gggtgcagcc gctgcccaag atccccaagc
     1741 gggtgtctag gaagctggta gtgtcctcag tggcgtgggg ctccttggcc cacctgcagg
     1801 caccgtcttt caggacttgg ggtcacttcc ttcacacagg actttggcgg aaatctctac
     1861 acccgtgtct cgtcatcccc ttcgagagca ttaactattt aaaaccagga gagaagcgct
     1921 gcgccgtccc tgctgcgccc ctgttagctc ataaagtcca gcttgtcccc tcaatccaaa
     1981 ggccattttc tcgagggggg gcaggcccgg gcatgggcat cacacgggga ggcctcagcc
     2041 accaaagggg aggcaagtgc actaccacaa tgctgcacca aagccggggc ggagcgtggg
     2101 atggtcactg cacagggact ggtatgggcc ctacagagcc agggcggccg tgacccgtgt
     2161 ccctgcgtgc agggcccatg ggacagaatc gccttaacgc ctggcccggg gccgcagaga
     2221 ggcggtccca cgggagggcc aggccttggt cgcgggagct gagttcttgc tttacgtcgt
     2281 gtacagaaat gaacttatgt ttctctggcg cttccttgaa gccgtagagt ttaggggctt
     2341 tttttaaaaa aaaagaataa aagaaaataa aaccctaaaa aaaaaaaaaa aaaaaaaaaa
     2401 aaaaa
//
