LOCUS       XM_017595886            7673 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus casein kinase 1, gamma 1 (Csnk1g1),
            transcript variant X1, mRNA.
ACCESSION   XM_017595886
VERSION     XM_017595886.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017595886.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017595886.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7673
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7673
                     /gene="Csnk1g1"
                     /note="casein kinase 1, gamma 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 21 ESTs, 5 long SRA reads, 21 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 30 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:64086"
                     /db_xref="RGD:621404"
     CDS             444..1847
                     /gene="Csnk1g1"
                     /codon_start=1
                     /product="casein kinase I isoform X1"
                     /protein_id="XP_017451375.1"
                     /db_xref="GeneID:64086"
                     /db_xref="RGD:621404"
                     /translation="MDHSNREKDDRQRTTKTMAQRNTHCSRPSGTSTSSGVLMVGPNF
                     RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGEGLP
                     QVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNL
                     IYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM
                     SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRSTPIE
                     ALCENFPEEMMTYLRYVRRLDFFEKPDYEYLRNLFTDLFERKGYTFDYAYDWVGRPIP
                     TPVGSVHVDSGASAITRESHTHRDRPSQQQPLRNQTTSSERRGEWEIQPSRQTNTSYL
                     TSHLAADRHGGSVQVVSSTNGELNVDDPTGAHSSAPITAHAEVEVVEEANCLKMLNLW
                     CCCFFKRKRKKTAQRHK"
ORIGIN      
        1 cacttccggc ttggctccgg ccgcccctca actggtcttc cccctcccct ccgcctcctc
       61 gtctccctcc cgctcctggg aaagcaaagc tgcggcttaa ggggtggttg agagaagcag
      121 tcgttgcctc agggagggga ccgcgtccgc ccccttggaa cagtggaaca cggctgatac
      181 aggaggacag gtgtgaggcc agtacacctt tgactcaatg gggcttaatt ggttacaaaa
      241 tgtcctccta tgcatgagat ctacagacta tatgttcttc aagaactgat cagtggtttt
      301 caccttctgg aagaacatta gaagcataaa tatggtgcca aaactcctca ttctctgact
      361 gtggtgatct ggacctactt ttgtgttgaa gagaagtata cacgctgagg tcactcattg
      421 ttcagagact gtcgtgtagg aacatggacc attctaatag agaaaaggat gatagacaac
      481 ggacaactaa aaccatggca caaaggaata cacactgttc ccgaccatct ggcacttcaa
      541 catcctctgg ggttctcatg gtgggaccca acttcagggt tggcaagaag atagggtgtg
      601 ggaacttcgg agagctcaga ttaggtaaaa atctctacac caatgaatat gtagccatta
      661 aactggaacc aataaaatca cgtgctccac aacttcattt agagtacagg ttttataaac
      721 agctcggcag tgcaggtgaa ggtctcccac aggtttatta ctttggacca tgtgggaagt
      781 acaatgccat ggtgctggaa ctcctcggcc ctagcttgga agacttgttt gacctctgtg
      841 accgaacgtt tactttgaag acggtgttaa tgatagccat ccagttgctt tctcgaatgg
      901 agtatgtaca ctcaaagaat ctcatttacc gagatgtcaa accagagaac ttcttgattg
      961 gccgacaagg caataagaaa gagcatgtaa tacacattat agattttgga ctggccaagg
     1021 aatacattga tcctgaaacc aaaaaacaca taccttacag agagcacaaa agcttaactg
     1081 gaactgcgcg atacatgtct atcaacacac atctaggcaa agagcaaagc cggcgggatg
     1141 atttggaagc cctgggccat atgttcatgt acttccttcg aggcagccta ccctggcaag
     1201 gactcaaggc tgatacatta aaagagagat atcagaaaat tggtgatacc aaaaggagta
     1261 ctcccatcga agctctctgt gagaactttc cagaggagat gatgacctac cttcgatatg
     1321 tcaggagatt agacttcttt gaaaaacctg attatgagta tttacggaac ctcttcacag
     1381 atctgtttga acggaaaggc tatacttttg actatgccta tgattgggtt ggaaggccta
     1441 ttcctactcc agtaggatca gttcatgtag attctggtgc atctgcaata actcgagaaa
     1501 gccacacaca cagggatcga ccatcacaac aacagcctct tagaaatcag accacatctt
     1561 cagagcgccg aggagagtgg gaaatccagc ccagccggca gaccaatacc tcatacctga
     1621 cgtctcactt ggccgcagac cgccatgggg gttcagtaca ggtggttagc tcaaccaatg
     1681 gagagctgaa tgttgatgac cccactggag ctcactccag tgcaccgatc acagctcatg
     1741 ccgaagtgga ggtagtggag gaagctaact gcctgaaaat gctcaacctg tggtgctgct
     1801 gtttctttaa gaggaaaagg aagaagactg ctcagcgaca caagtgacca gtgcctccca
     1861 ggagtcctca agtcctgggg actctggctc caattgcacc tgcagctcct gccatttctc
     1921 attggaaggg actcctctgt gggggagggt agagatccaa accaaaaaga agaaaacaga
     1981 tgcccccaga aggagccagt gcaggcagcc agggccaagt gggccagtgg caatcccctc
     2041 tgtctgagct ctgagcgggt ccagagctgc tgcttctcca ctgcttgccc ttgggctatc
     2101 tggttgactc tcttcccatt gtttacagtg aaggtgtcat tcacaaaaac tcaaggacta
     2161 ctgttctctt cccttctctt cctttactcc tggctcttgc accatcctca accctctcca
     2221 gcatagaaac tactaagcta aaggctctgt caagaagctg gtggtgtggc caagaagata
     2281 ggggaagacg acagccctgg gctggagaac gtctccacgt cccagatgtg tctggtagta
     2341 tggtttcctc cttctgtgcc tgggtaaccc ctcagcccag ctggccacag ggttctggtc
     2401 cctttcttgg tccctccctc cctccctccc tccctcctgt gaagttacac tctgggacac
     2461 aagctgtgag caatctgcag tctactgtcc ctgtgtattg gcattcttag cttttttgac
     2521 aagcagatcc tttgctccag gctgtagcaa aacaagcctg tggttctgag caaaggagaa
     2581 gaaactgact ttattgcact tttagtttgg gggtttgttt tttttatttt gtaaacaaca
     2641 tggcagatgc atattgtgtc tggttatatt ggggggttac ttttttcttt tttcaagggg
     2701 gatgggccag ccaagccatt cagagaaaat gtgggtccag aggacattct tgatggaaag
     2761 agtctgattt gcagcacttg gaagagaaga agccaaactc tgcgtcatcc tgagtaaata
     2821 ctcaggttgg caaggaaaca tacttgaatt ttcattcatc ttctctgctg cagaaaaaag
     2881 tccccaccag agccccttga cctaatcagc ccagagctgg aaagcccagc tcctgagcac
     2941 ttgggatgag caccgagcca gactgtgacg accagaaggc acctcacctc agagaggaga
     3001 tacttaacaa caacaacaaa acaaaatttc tgtttcctcc actgccaggg acttcctact
     3061 agatagccat gtgactttct gttgactcgg ggaacaaaat tagtgactaa acagccacca
     3121 ccatattgcc agtagtggac aaaagaaggc accaaatttg ccttccaact gccagaggaa
     3181 gctcaggatg cagcatccta gggccatgaa aagaaaaata aatattttct gtctgcctga
     3241 agtgagctag aacatttggg tcagtctgcc ttagaaccca ggcctgtgga atcttggagc
     3301 atatccatgg cagcaggctt agaactcggt acgtgggctg cagtacgcag ggaaggtaag
     3361 actggttggt gctaggaaat tccagggaaa aggaaactgt aatgaaaggt ctacaattta
     3421 tcttacaatt gaacagactc tgtccagata atatgaccac atatcttagc atgttttccc
     3481 catacactct acctgtcacc attttcttcc ctggacatac caccatgaag catcactggc
     3541 tgcagagtta actgcgtggg gttactcttc ccatgttcta tttcatttga gattagtagc
     3601 atttccagat ggtgacttct tatactagtt gtggcaagaa gaatttttca tgtgggaaaa
     3661 gaggtctgtg tctgggtata aagagctaag cacataggac agtggctagt gacttagtgc
     3721 agcacagaac cctttgcttg tttatgtaga ggactggaag atgtcaggac acttggtggt
     3781 catgggtcaa atttagtatc ggatgaagca gagagttcgt gcgccttacc tgttctgtgg
     3841 accttggcta gggaatctct cctcccactg ccttcagacc tgctcagcat ttgtgaagat
     3901 ggccacctgg ctgtttctat acatgaaatg ttcttgtctg tgaaacagag tggcagggag
     3961 aagtcaggtc aaatcccttt cccataagga atttgagtgt taggatttgc ttccttttta
     4021 ctctatagta gttaaagctc attactaaat tttatatagt ccctcgtttg gcatgtgggc
     4081 aactctgact acccctacag aaacttaaaa atcctcatcc caggaaatgg tggcaaggcc
     4141 tagagcatcc tggcactctc tgccccacta agtgcctccc ccaccctgct tccaagacaa
     4201 agcaaaggca gtggcctgct tggctgcagg gtggggtgcc ctgcagctgg gcttaagact
     4261 tcttttttgt cttaaaatat ttttataggc tagctcttga gtggttgaac ctgagtggtt
     4321 tgtgggtgtg ggggagggtc cttcctacta cactgttggc accctccaac ccccacaaat
     4381 cccttaataa atatttgggt tttgtagcaa aggtcccttt aaaatgcagg atgggtggtg
     4441 atcctttcaa agctattgac accctaaggt gatcccaacc ctgagtaatt ctcttatctt
     4501 ctttaaaatt aaaatataac tgaattcccc agggacaatc tgttcatcag ttcagccccc
     4561 accccacccc accccacccc agcacgtcaa gctgcatgca catccctgtt tcttttacct
     4621 gcctgactgc aaactcagcc agatccacgg gcacaggcac tccctccatc ttcctgcatc
     4681 taagtccact tactccacct caggtatgac acctgaggac agttttcttt aatattgatg
     4741 catttacttc cccttaaact aactcacctg ttccctgaga tggggcattt catactgtgc
     4801 tatttggagt tttcctcaag ctttgctgac cttgagacat tgcagtctga gcatactaag
     4861 taaggtccaa ccggaccagg gctacaccac ggtgtaaagt gtccaggcat acaagtgggc
     4921 tttcagagta cttactcaga ctgcccacaa ggctgcactg aatgtgccag cagctagtga
     4981 gcactcctga ctgccttaat taacattctt ctattctggg tctgtccagg agcaaacagg
     5041 gtctgtgaag gtatgtgtaa gtcaggtgac tagctaagtc tccagttcaa attcccattt
     5101 caggggttgg ggatttagct cagtggtaga gcgcttgcct aacaagcaca aggccctggg
     5161 tttggtcctc agctccggaa aaaagaaaag aaaggaaaaa aaaaaaaatc ccattccaat
     5221 tggaacaaac tgcaggaaac agcaaggatt ccaagatttc tgaaagtgtt aaatttcctt
     5281 ttcattttta gtgaatgaca agaactcaga aaacagccga tgtccactag ccagctggtg
     5341 tccatttctg taaaatacct tccagtttag ttcagaagaa aagtgtgctg tagcgcttat
     5401 tgagtgttga tgttcaatgt tagcaaccac gtgagatgcc acaagtgtgc tgttaaagtg
     5461 gttggtaagg atcatagcct tattttaaaa aataatgtaa aagataattc attcccctcc
     5521 atgagcaagt atggctgcat ttctcaagaa taacgccaca gaagcctagg aagcgtttcc
     5581 tcacaagaac ttggtcttag tttcttttga tcaatccctc ccaagcccat agaactcctg
     5641 aatcccagcc acctctccca tgttcataag tgaaaccagt ttttcacttt tgtttagttg
     5701 ctctgatgat actttatcta gtgtcggtca tgccatggcc tgagttttta agaccaggag
     5761 ttgtatggtc atataaccaa cattgccttt gctaggccac tgccaccatc ccctccattg
     5821 ccccaagtgg gcaggttgat tccagagtcc ctcagggagc cagaataact aggtacccat
     5881 ctggattggc catttgggta atgagcactt acctctgggt ttcttgattt tgcagattga
     5941 tggccaagac tccagccttc cccatgatgg gttggtagga atcaaattaa atccctttgt
     6001 ttattgggca actttgtgtt aagggcgtta ggttttttgt tttttgtttt ttttttggtt
     6061 tttggtttgt tttttttgtt gttgttgttg ttgttttttt ttttttggtt tttttttttt
     6121 tttttttttt ttgattatga aaaagaagag gtcaccatat ggggcccttc tgtgagtttg
     6181 taaagttttg agcagtgttt tcttcaccag tcttgggagt ctctgatcca ataaccagtc
     6241 ttaacatttt tttttttttt tttttacttt tgaaagtaac taagtacaga gattagagtt
     6301 cttattgtat tcaaaatagt agacccctga gtgtaggcaa tagtagttga aatattttct
     6361 caaaaaaaca aaacaaaaca accaggaaac ccactccagt atttatagat cagcttatca
     6421 agaaaaaaag tgaatatgca ctcaatgtgt ctctagttca gttaccaaac ttgatattat
     6481 aaagaaacct cagttgtgtg gacaggatcc cccccccccc aaaaaaaaaa aaaaaaactc
     6541 ttttctggtg ccatcaccac ctttagggtc taaaagcaga ggatcatctg tgatgataag
     6601 ccagaaagga atgcacaggc aattcccatc ctgattgccc ccaaacggac ctttcagggt
     6661 tggtgaaact ttttgctgcc cctctttggg cactccagac caaatcccag gccattccat
     6721 gcaccgaaag cctttcagaa ggcttaccaa tctgttagga atgtctcagg aaacatgagc
     6781 catttcttgg ggaatacatg tatttacaaa tggatgtatg cagtctgctg tatgtgtttt
     6841 attctcagag acagcacaag ctcctgggaa ctgtgttcct tagtgttctc agtgagctgc
     6901 tcagaccagt gagtaagctg gctctgggaa agagctatgt ttgtcaagca gagaatggca
     6961 gaaaaaatga aaccaaaaat gctatcactc tccaatggaa agtcgcgttg atgcagcaat
     7021 tcccattgga tgtattacac tctgattcat cgtttgtctc aagtgttacc cattgtactc
     7081 tttagaaggt gttaggatgt tggtctcaat ttttttaagt agatgatgta taatcagcta
     7141 tggaaatcag ttttaattca tgtgtggatg tgtctagtta ttgttaaatg ttcttttttt
     7201 ttcctacttt tttaaagata cgtaatgttt cataatccct ggcactggtc aaaaaaaaaa
     7261 cagctgtgaa aaatgaaatt gtattttttt ttttttttgg ttcttttttt cggagctggg
     7321 gaccgaaccc agggccttgc gcttcctagg taagcgctct accactgagc taaatcccca
     7381 gccccgaaat tgtatttttt aaatgaatgt caatttcaag tgtatttgaa atgtttcctc
     7441 cagttgacag atttgaacac cattagagaa gacttctttg cagaggaagt agcctttgga
     7501 gaaagtggaa tgtgggtctg gatatgttat ctcagagtag cccatttcat agggcaccat
     7561 gacaacacaa atgtgatctt taagtatacc tcttcccctt ggggaaggaa ggactcagtt
     7621 tgcacccttt ttgtatgtaa aataaaatgt cctacctttc ttggctactt tta
//
