LOCUS       NM_001105741             868 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus casein alpha s2-like A (Csn1s2a), mRNA.
ACCESSION   NM_001105741 XM_001074092 XM_341197
VERSION     NM_001105741.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Hobbs,A.A. and Rosen,J.M.
  TITLE     Sequence of rat alpha- and gamma-casein mRNAs: evolutionary
            comparison of the calcium-dependent rat casein multigene family
  JOURNAL   Nucleic Acids Res 10 (24), 8079-8098 (1982)
   PUBMED   6298707
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474125.1.
            
            On or before Oct 3, 2007 this sequence version replaced
            XM_001074092.1, XM_341197.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: J00712.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p21"
     gene            1..868
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /note="casein alpha s2-like A"
                     /db_xref="GeneID:114595"
                     /db_xref="RGD:621152"
     exon            1..39
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
     exon            40..102
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
     CDS             52..591
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /note="alpha-S2-casein-like A; gamma-casein; casein gamma"
                     /codon_start=1
                     /product="alpha-S2-casein-like A precursor"
                     /protein_id="NP_001099211.1"
                     /db_xref="GeneID:114595"
                     /db_xref="RGD:621152"
                     /translation="MKFFIFTCLVAAALAKHAVKDKPSSEESASVYLGKYKQGNGVFF
                     QTPQDSASSSSSEESSEEISEKIEQSEEQKVNLNQQKKSKQFSQDSSFPQICTPYQQQ
                     SSVNQWPQPNAIYNIPSQESTSTSVEEILKKIIDIVKYFQYQQLTNPHFPQAVHPQIP
                     VSSWAPSKDYTFPTARYMA"
     exon            103..129
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
     exon            130..153
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
     exon            154..195
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
     exon            196..222
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
     exon            223..246
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
     exon            247..291
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
     exon            292..411
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
     exon            412..435
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
     exon            436..462
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
     exon            463..585
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
     exon            586..868
                     /gene="Csn1s2a"
                     /gene_synonym="Csng"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 catctaccta ttcctctcgt cttccacttg ggaagcaagg atcaagtaac catgaagttc
       61 ttcatcttca cctgcctggt ggctgctgct ctggctaagc atgcggtaaa ggataaaccc
      121 tccagtgagg aatctgccag tgtctacctg ggaaagtata agcagggcaa tggtgtgttc
      181 ttccaaacac ctcaggactc tgctagcagt tcatccagcg aggaatcatc tgaggaaatc
      241 agcgaaaaaa ttgaacagtc tgaggaacaa aaggtcaacc taaatcagca gaagaaaagc
      301 aagcaatttt cccaggactc ttccttcccc caaatttgca caccttatca acagcagagt
      361 agtgtgaacc aatggcccca gcctaatgcc atctataaca tccccagcca ggagtccacc
      421 agcacctcag tggaggaaat cctgaagaag atcattgata tcgtcaagta cttccaatat
      481 caacagctca ccaaccccca ctttccccag gctgttcatc cacagatacc tgtgagctct
      541 tgggccccca gtaaggacta caccttccca actgctcgct acatggcttg agtagaaaat
      601 tggtttatgc atagtctgca taggagatca ttgcatcatc tcctctgtta acgttcccta
      661 agatgcttct tgaaaagaca acaatactga gccagaagga gaaagagtgg gcaattttct
      721 gtattgttta taatctttgt ggattgcatt gtatgtggat tggattgtgg aaccatatta
      781 actgtattgt ttaattggag tcttttcagt actacttcag agataagaag caaaatatct
      841 cttgccaaga cattaaagtt ttaaacgc
//
