LOCUS       NM_001108607            3585 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus chromosome segregation 1 like (Cse1l), mRNA.
ACCESSION   NM_001108607 XM_001072176 XM_342581
VERSION     NM_001108607.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3585)
  AUTHORS   Buschow,S.I., van Balkom,B.W., Aalberts,M., Heck,A.J., Wauben,M.
            and Stoorvogel,W.
  TITLE     MHC class II-associated proteins in B-cell exosomes and potential
            functional implications for exosome biogenesis
  JOURNAL   Immunol Cell Biol 88 (8), 851-856 (2010)
   PUBMED   20458337
REFERENCE   2  (bases 1 to 3585)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   3  (bases 1 to 3585)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474005.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_342581.3, XM_001072176.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3585
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..3585
                     /gene="Cse1l"
                     /note="chromosome segregation 1 like"
                     /db_xref="GeneID:362273"
                     /db_xref="RGD:1307536"
     exon            1..82
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            83..177
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     CDS             93..3008
                     /gene="Cse1l"
                     /note="CSE1 chromosome segregation 1-like"
                     /codon_start=1
                     /product="exportin-2"
                     /protein_id="NP_001102077.1"
                     /db_xref="GeneID:362273"
                     /db_xref="RGD:1307536"
                     /translation="MELSDANLQTLTEYLKKTLDPDPAIRRPAEKFLESVEGNQNYPL
                     LLLTLLEKSQDNVIKVCASVTFKNYIKRNWRIVEDEPNKICEADRVAIKANIVHLMLS
                     SPEQIQKQLSDAISIVGREDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRY
                     RHEFKSNELWTEIKLVLDAFALPLTNLFKATIELCSTHANDASALRILFSSLILISKL
                     FYSLNFQDLPEFFEDNMETWMNNFHTLLTLDNKLLQTDDEEEAGLLELLKSQICDNAA
                     LYAQKYDEEFQRYLPRFVTAIWNLLVTTGQEVKYDLLVSNAIQFLASVCERPHYKNLF
                     EDQNTLTSICEKVIVPNMEFRAADEEAFEDNSEEYIRRDLEGSDIDTRRRAACDLVRG
                     LCKFFEGPVTGIFSGYVNSMLQEYAKNPSVNWKHKDAAIYLVTSLASKAQTQKHGITQ
                     ANELVNLTEFFVNHILPDLKSNNVNEFPVLKADGIKYIMIFRNQVPKEHLLVSIPLLI
                     SHLGAESIVVHTYAAHALERLFTMRGPNNATLFTAAEIAPFVGILLTNLFKALTLPGS
                     SENEYIMKAIMRSFSLLQEAIIPYIPTLITQLTQKLLAVSKNPSKPHFNHYMFEAICL
                     SIRITCKANPAAVVNFEEALFLVFTEILQNDVQEFIPYVFQVMSLLLETHKNDIPSSY
                     MALFPHLLQPVLWERAGNIPALVRLLQAFLERGSSTIATAAADKIPGLLGVFQKLIAS
                     KANDHQGFYLLNSIIEHMPPESVDQYRKQIFILLFQRLQNSKTTKFIKSFLVFINLYC
                     IKYGALALQEIFDGIQPKMFGMVLEKIIIPEIQKVSGNVEKKICAVGITKLLTECPAM
                     MDTEYTKLWTPLLQSLIGLFELPEDDSIPDEEHFIDIEDTPGYQTAFSQLAFAGKKEY
                     DPVGQTVNNPRVHLAQALHRLSTACPGRVPSMVSTSLNAEALQYLQGYLQAASVTLL"
     exon            178..320
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            321..422
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            423..568
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            569..659
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            660..767
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            768..860
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            861..1028
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1029..1158
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1159..1224
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1225..1427
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1428..1512
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1513..1574
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1575..1711
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1712..1815
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1816..1913
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1914..2064
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            2065..2273
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            2274..2371
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            2372..2457
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            2458..2539
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            2540..2686
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            2687..2918
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
     exon            2919..3585
                     /gene="Cse1l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcggagcag ccgctggagt gggtagtgtc ggcttgtagc tctcgcttgg gattccctcc
       61 tcggtctcgg cgtccccacg agattcagag tcatggagct cagcgatgcc aatcttcaga
      121 cactgacaga gtatttaaag aaaaccctgg atcctgaccc tgccatcaga cggccagctg
      181 agaaatttct cgaatctgta gaaggaaatc agaattaccc actgttgctt ttaacattat
      241 tggaaaagtc acaggataat gtcattaaag tatgtgcttc agtaaccttc aagaactata
      301 ttaaaaggaa ttggagaatt gttgaagatg aaccaaacaa aatttgtgaa gctgatcgag
      361 tagctataaa agccaacata gtgcacctga tgctgagcag cccagagcag atccagaagc
      421 agctgagtga tgctattagc attgttggca gagaagattt ccctcaaaaa tggccggact
      481 tgctgacaga aatggtgaat cgctttcaga gtggagattt ccatgtcatt aatggagtcc
      541 tgcgtacagc gcattcactg tttaaaagat accggcatga gtttaagtca aatgagctgt
      601 ggactgagat taaacttgtc ttggatgcct ttgctctgcc tttgactaat ttatttaagg
      661 ctaccattga actgtgcagt acccatgcaa atgacgcttc tgccctgagg attctttttt
      721 cttccttgat cttgatctca aaattgttct acagtttaaa ctttcaggat ctccctgagt
      781 tctttgaaga taatatggaa acttggatga acaattttca taccctcttg acattggata
      841 ataaactcct acaaactgat gacgaagagg aagcaggctt actggagctt ttaaagtctc
      901 agatctgtga caatgctgct ctctatgcac aaaagtacga tgaagagttt cagcgctacc
      961 tccctcgttt tgtcactgcc atctggaatt tgctagttac cacaggtcaa gaggttaaat
     1021 atgatttgtt ggtaagtaat gcaattcagt ttctggcttc agtttgcgaa agaccacatt
     1081 ataagaatct gtttgaggac cagaacaccc tgacaagtat ctgtgaaaaa gttattgtgc
     1141 ctaacatgga atttagagct gctgatgaag aggcctttga agataactct gaagagtaca
     1201 taaggaggga cttggaaggc tctgatattg atactagacg cagggctgct tgtgatcttg
     1261 tacgaggatt atgcaaattt tttgaaggtc ctgtgacagg aatcttctct ggttatgtta
     1321 attccatgct ccaggaatat gcaaaaaatc catctgtcaa ctggaaacac aaagatgcgg
     1381 ctatttacct tgtcacgtct ttggcatcaa aagcccaaac acagaagcat ggaatcacac
     1441 aagccaatga acttgtaaac ctaactgaat tttttgtgaa tcacatactt ccagatttaa
     1501 aatcaaataa tgtgaatgag tttcccgtgc ttaaagctga tggcatcaaa tatattatga
     1561 tttttaggaa tcaagtacca aaagagcacc ttttagtctc catccctctc ttaatcagtc
     1621 acttgggggc tgaaagcatt gttgttcata cttacgccgc acacgctctc gagagactgt
     1681 tcaccatgag ggggccgaac aacgccactc tttttacagc tgcagaaatc gcaccgtttg
     1741 ttgggattct gctaacaaac cttttcaaag ctctcacact tcctggctct tcagaaaatg
     1801 aatatattat gaaagccatc atgagaagtt tctccctcct gcaagaagcc atcatcccct
     1861 acatccctac cctgatcact cagctcacac agaagctgct ggctgttagt aagaatccca
     1921 gcaaacctca tttcaatcac tacatgtttg aagcaatatg tttgtctata agaataacct
     1981 gcaaagctaa ccctgctgct gttgtgaact ttgaggaggc tctcttcctc gtgttcactg
     2041 agatcttaca aaatgatgtg caagagttca tcccatacgt ctttcaagtg atgtctttac
     2101 ttctggaaac acataaaaat gatatcccat cttcctatat ggccttgttt ccccacctcc
     2161 ttcagccggt actctgggaa agggcaggaa atatccctgc tctggtgagg ctgctccagg
     2221 cattcttaga gcggggctcc agtacaatag cgactgctgc agctgacaaa attcctggat
     2281 tactgggtgt cttccagaag ttgattgcat ccaaggcaaa cgatcaccaa ggtttctatc
     2341 ttctcaacag tataatagag cacatgcctc ctgagtcagt tgaccagtac aggaagcaga
     2401 tcttcatcct actgttccag agactgcaaa actccaagac caccaagttt atcaagagtt
     2461 tcttggtgtt tattaactta tattgcatta agtatggggc actggcatta caagaaatat
     2521 ttgatggcat acagccaaaa atgtttggaa tggttttgga aaaaatcatt attccagaga
     2581 ttcaaaaggt atctggaaat gtggagaaga aaatctgtgc agttggcata accaaattac
     2641 tcacagagtg tccagcaatg atggacactg agtacaccaa gctgtggact ccgttgttac
     2701 agtctctcat tggcctgttt gagttacctg aagatgacag catccctgac gaagagcact
     2761 tcattgacat agaagacacc ccagggtacc agactgcctt ctcacagctg gcgtttgctg
     2821 gtaaaaagga gtatgaccct gtgggtcaga cggtgaacaa ccccagggtc catctggcac
     2881 aggcacttca cagactgtct actgcctgtc cgggaagggt tccctcgatg gtgagcacca
     2941 gcctcaatgc agaagccttg cagtacctcc aaggttacct gcaggcagcc agtgtgaccc
     3001 tgttgtgaac tgcatcttcc tgacccatgg ggggctgagg atggtttctt aggaaccatg
     3061 tggacttctg agcacggccc tgctgaagca tcacaggttt ccaacctctt gaacttgtca
     3121 gactctcaca gaggacagta aatactgctg taagccaatg aggtttgtct tgatcaccaa
     3181 tataactgat aacttgtctg gtttgtcctt aatgggacaa gtatttacaa ccccatgtat
     3241 ggccatggtc tctgtggagc atttgcacgg tttgggttat ttcaaatttt tgtcagaccg
     3301 tgactgtgga gacttatttc tgttgttttg ttttgaagct tgtatttctc ttgtctttgt
     3361 gtttgttgtc tgtttcttta agcttttatt ggaaatatga aaagaatctc ttgttgactt
     3421 gcaatgcaca tttcatagtc tgtaatcagc aataaaaacc caaaatgtgt atctaaaagt
     3481 gtcaaggaca ggattttggt gctttctaaa actttgataa aatgaagaat ttctttaaat
     3541 ctactttccc cacctggact ccataaaaat actaattttt aaatc
//
