LOCUS       XM_006229462            5743 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus CREB regulated transcription
            coactivator 3 (Crtc3), transcript variant X1, mRNA.
ACCESSION   XM_006229462
VERSION     XM_006229462.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 16, 2024 this sequence was replaced by
            NM_001427241.1.
            
            On Jan 21, 2021 this sequence version replaced XM_006229462.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5743
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5743
                     /gene="Crtc3"
                     /note="CREB regulated transcription coactivator 3; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 ESTs, 3 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 137 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:365297"
                     /db_xref="RGD:1309666"
     CDS             1021..2877
                     /gene="Crtc3"
                     /codon_start=1
                     /product="CREB-regulated transcription coactivator 3
                     isoform X1"
                     /protein_id="XP_006229524.1"
                     /db_xref="GeneID:365297"
                     /db_xref="RGD:1309666"
                     /translation="MAASPGSGSANPRKFSEKIALHTQRQAEETRAFEQLMTDLTLSR
                     VQFQRLQQLRLTQHHGGSLPNVSQLRGSAPELQPSLHHADNVRGTRHHGLVERPARNR
                     FHPLHRRSGDKPGRQFDGNAFAASYSSQPLDESWPRQQPPWKEEKHPGFRLTSALNRT
                     NSDSALHTSALSTKPQDPYGGGGQSAWPAPYMGFCDGENDGRGEAAFPGLLKEENLLN
                     VPKPLPKQLWETKEIQSLSGRPRSCDVGGGSAFPHNGQNTGLSPFLGTLNTGGSLPDL
                     TNLHYSAPLPASLDTSDHLFGSMSVGNSVGNLPAAMTHLGIRNSSGLQSSRSNPSIQA
                     TLNKIALSSSLNSHPQPSVANASALHPSLRLFSLSNPSLSTTNLSGPSRRRQPPVSPL
                     TLSPGPEAHQGFNRQLSATSPLNPYPASQMVTSEQSPLSFLPTDAQAQVSPPPPYPTP
                     QELPQPLLQQPHAHEPPAQQPQAAPSLSQSDFQLLTAQGSSLTNFFRDVGFDQQPMRP
                     SPAFPQQVPLVQQSHREPQDSFHLRPNPYSNCGSFPNTILTEDTNTSLFKGLSGGLSG
                     MPEVSLDMDTPFPLEEELQIEPLSLDGLNMLSDSSMGLLDPSVEETFRADRL"
ORIGIN      
        1 aggtggggct ttttaaaaag ataaactcca agcatatgaa gcaaaatgac ttttaaaaag
       61 ttttgtatgt gtatgtgtgc atttaggtat gtgctcgcca cggcccgagt gtggaggtca
      121 aaggacaatt ttcaggagtc agttatctgc ttctacatga gtcatttagc tggccccaaa
      181 atgcctttta aattttattt gcagtgctgg aatcaaaccc aagggcctaa ggcttgacat
      241 acaagcgctc tacagctgaa caccatctcc aggccctgca aaaatgtttt gatggtttaa
      301 tcatgaggtg tgtgggcgtt attaatgtta ttttctgtac ttctccgcat gtctctaatg
      361 cgtcctaatt tacaaaacac agtcctctgc tcaacactct ccaggacatg ttggtgtaca
      421 attatgttgg aagcgcttct gggctgaaaa ggggaaacct gatgaggctg ttttaaaaca
      481 cataaaacac agttgaaggg actggagaga tggctcagtt aagagtacat accgctctcg
      541 cagaggactg gtgtttagtt cctagaccag tgggatctcc gtgggtgtct gcacgcacat
      601 gtacatacgt acatatccac actgagggat gtggggagtg gtactcagcg gctttcacac
      661 ataggcgcgg cttagctttg ctgatgggat gtaggtgtga gaagtcccga agcaggctgg
      721 ggacagcggg ctcagccctt ggtccgctcg cccgaggccc ggctccgcgg cggggaggcc
      781 gggcttcggg gcccggaggc cgggcgggcc gcgccgaggg cggggccggc gcgcgggggc
      841 ggacctcggc gcgctcccgg ccgcttgctg gctctggggc cgcggcggct cctctgccgg
      901 gtcgcgccgg aggacaggct tcgggcggcg gcttggacgg cctgcggacc gagcgggtgg
      961 gccgagcctt ggaaccccac gcttgccgtc tgccttgccc gctagcgcgg ggcgcgcgcc
     1021 atggccgcct cgcccggctc gggcagcgcc aacccgcgga agttcagtga gaagatcgcg
     1081 ctgcacacgc agcggcaggc cgaggagacg cgggccttcg agcagctcat gaccgacctc
     1141 accctgtccc gggttcagtt tcagaggctt cagcaactgc gccttacaca gcaccacggg
     1201 ggatccttac ctaatgtgag ccagctgcgg ggcagcgcac cagagcttca gccgtcactc
     1261 catcacgctg ataatgtccg tgggacccgc caccatgggc tggtggagag gccagcccgg
     1321 aaccgcttcc accctcttca ccgcaggtct ggggacaagc cagggagaca gtttgatgga
     1381 aatgcttttg cagccagtta ttcttcgcag cccctggatg agagctggcc aaggcaacag
     1441 cctccatgga aagaggaaaa gcatcctgga ttcaggctga catctgcact taacaggacc
     1501 aattctgatt ctgctcttca cacgagtgct ctgagcacca aaccccagga cccctatgga
     1561 ggaggaggcc agtcagcctg gcctgcccca tacatgggtt tctgtgatgg tgaaaatgat
     1621 ggccgtgggg aagccgcctt ccccggtctg ctgaaggaag agaatctgtt aaacgtcccg
     1681 aagccactgc ccaaacaact gtgggagacc aaggagatcc agtccctgtc tggacgccct
     1741 cggtcctgtg atgttggggg cggcagtgcc ttcccacata atggccaaaa cacaggcctc
     1801 tcgccatttc tggggaccct gaacactgga gggtcattac cagatctaac caaccttcac
     1861 tactcagcac ccctgccagc ctccctggac accagtgacc acctctttgg tagcatgagc
     1921 gtggggaaca gtgtgggcaa ccttccagct gctatgactc acctggggat aagaaactcc
     1981 tctggtctcc agagttctcg aagtaaccct tccatccaag ccacgctcaa taagattgcg
     2041 ctgtcctcat ccctcaatag ccacccacag ccgtccgtgg ccaatgcctc tgctctccac
     2101 ccctcgctcc gtctcttctc ccttagcaac ccatctcttt ctaccacaaa cctgagtggc
     2161 ccctctcggc gcaggcagcc tccagtcagc cctctcacgc tctctcctgg ccctgaagca
     2221 catcaaggtt tcaacagaca gctatctgca accagcccac tgaacccgta ccctgcctcc
     2281 cagatggtga cctcagagca gagtccactt tccttcctgc ccacagacgc tcaagcccaa
     2341 gtgtccccac caccccctta ccccacaccc caggagctgc ctcaaccact cctacagcag
     2401 ccccatgccc atgagccccc agctcagcag ccccaggcag ccccctccct gtcacagtca
     2461 gacttccagc tcctcactgc ccagggctcg tctctgacca acttcttccg cgatgtgggc
     2521 tttgaccagc agcccatgag gcccagcccc gcctttcctc agcaggtgcc tttggtacag
     2581 cagagccacc gagaaccaca ggactcgttc cacttgagac caaacccata ttccaactgt
     2641 gggagcttcc cgaacaccat cctgacagaa gataccaaca ccagcctgtt caaaggcctt
     2701 agtggggggc tgtcgggcat gcctgaggtc agcctggaca tggacactcc gttcccgctg
     2761 gaagaggagc tacagatcga acccttgagc ctggacggac tcaacatgtt aagtgactcc
     2821 agcatgggcc tgctggaccc ctctgtggag gagacatttc gagctgaccg gctgtgagca
     2881 aaacacagtg gaactgggga actgaagtgg ccaggataag ctagactgga gccagcaaca
     2941 ccctgacggt agtcacagca tagaggaagc catgctgccc caggctctct actgaggtcc
     3001 tagctcagat gccatgtact gctgcaggcc acctgctttg gagcttctgg tgaccaggaa
     3061 gctcatcatg tcacccttaa ttctttgtat aggccacctg gtcagtcatt gtgtaaacat
     3121 agaaaatgct gggtaacgtg tccgtgctcc agacctcgga tccctgtcag cactgaagac
     3181 aggacccgta taggaggcag ttggaggcca taggcccatg gagttggctc agtgtcacac
     3241 aacggtacca gagcaccatg atgcctttct gtctgaccgc caaagccagg taccctccaa
     3301 ctggtgggta ttctgggcct agccattgct ctgccaaatg gcttaattaa aatgaagaag
     3361 cttagccacc gtcccagggc atgcttaagt tgggcaaact gagtgtagtt tgtgatctct
     3421 tctctgctgc tttcctgtat gtgccttctc ctcacacaca gaaggagagg gagactcgtg
     3481 cccttggaga taggatgagc ctaaagaaga cagtgctcct aggagactgg aggagaaaaa
     3541 ggaggctgtg tgtgtcacct gcacacaatg ccctccatct tagacctgcc accttccagc
     3601 ccactagaag gagctgcggg gactcctgtt agcacttagt agctgcaccg accttttcct
     3661 ccccagcttc ccctgcagac ctcaagctta atgcgattcc cactagactg taagctccca
     3721 cagggcagga actgtgcctt gttctgtact gatccctagt gccactaagt gcctggtagg
     3781 aatgcgtggc atggatggct atgcctcgtg gtgtggcggt ctgacctgta gctgtctcca
     3841 ttccctgcct tagctcagag ctttaacctt ttcatactgg tgccttggat tcagactcac
     3901 ttgagtatgt gccttaacac taggtgacca gtcctatccc taggctcagc accccctcct
     3961 tgggcgtatg tctctcagca gctaggtggg aatcatctaa tgagtgcacc cagagtggct
     4021 gatcaccaaa ccctgtgagt gtgggacacc tggcatccag actagcccca cagcaaattc
     4081 ttcccactca gacccatggc tttttctaaa ttgcttaaaa tagaggtgca aacgttgagg
     4141 ttaagaaatg tggcctagtt catgggactc ttgttattca ttaacacctt gtcgcacagt
     4201 catttgagca gattctccac cgcctgcctc ctaaccccaa atggggaaag cggtgaggtc
     4261 cacagcacaa ggggaggagc tagggtgggg aagaggagga gcctggaaga gaatccctgc
     4321 ttggacacct gctgcccttc ctgaggacgt ggggtgtagc tgaggctttc ccacccagga
     4381 gagcaagggt ggagtagaag gaagctgata catctgtgcc taaggcaggc agagcctgtg
     4441 gaccggaagc tggctcctcc agcttcccac acggtgacca cgcggtctct tcttaggcct
     4501 tccccgagga cccaagaatt ccctggtccc atttacctca gtctctgctg tttaattgag
     4561 aaaccaaatt agaatcctgt tcacctgatt ccaccctgaa gatgccaccg acctccgctc
     4621 taaagcccta ttcccagtga aactcatgtg cttgatgatg gagatcctgg agcgggtcga
     4681 cttcaattaa agtgaaagct tttcacccct cgtgctgccc agcacccagc attcccacgg
     4741 aagccagctc ccgtgaagag gcccctgaaa ttggatctcc accttgaggc agagatgggt
     4801 gctgatgtaa aagttgagag ggttcccagc actatctgct ctctgcaatc aagccatatc
     4861 catggtcatc atgtgggtga cacccataca gcacatggga ggggccaggt atgacagagt
     4921 caggaggaag agaaccctga aggagaatct ctgctccaac agatgctgtc cttccatggg
     4981 ggtgtaacag gagagctcac aaccccatgc cctaaattgc cctgcccctg aggcattctc
     5041 cagccgatgg gcaagcactg gctatagggg aagttagagg aaatgtagca ctggattaaa
     5101 tctgccttta ggcccaccaa cctgatcttc tcatatgagt agctttaagc cacaggagag
     5161 cccacccgtc ctgatggtgt tgagcacact gggagagtgt tgccctaccc cagccctgta
     5221 agcctgcact ccatgctgcc tttgtgacaa acctgtctta ggcctcagcg ttgcagtggc
     5281 tacaggcttc cccagagcta cgttcagtgt cttctctgtc acagcagctg tgctccttcc
     5341 ctggcagcgc agcggccagg ggctctgagg tatgagtgtg aggaggactg ttctgatctg
     5401 tcagagcagc tcccctctgc ctgccccctt ccccccacgt ctactgtata ctctgggccg
     5461 agaggtcatg cgtgtactca tgctcgtgca catatctgaa gacgtgtcct gttgggactc
     5521 tccagggctc ttctgattca tgcacagatg gtgcccatcg tttccactgc tccagaatgg
     5581 ggccatcccg cagctagtca gacttccggc cagtgcccta actcccagcc ttttgttaag
     5641 caatattgaa agattggact ttgtataaag tagcttccag gttttataat gcatcatttt
     5701 acatctttcg taattaaaag cagcacaata tggttgtatc tgc
//
