LOCUS       NM_001109303             997 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus cysteine-rich protein 3 (Crip3), mRNA.
ACCESSION   NM_001109303 XM_001066297 XM_576515
VERSION     NM_001109303.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 997)
  AUTHORS   Kirchner,J., Forbush,K.A. and Bevan,M.J.
  TITLE     Identification and characterization of thymus LIM protein: targeted
            disruption reduces thymus cellularity
  JOURNAL   Mol Cell Biol 21 (24), 8592-8604 (2001)
   PUBMED   11713292
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001109303.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CX570778.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-52                JAXUCZ010000009.1  22054840-22054891   c
            53-147              JAXUCZ010000009.1  22054450-22054544   c
            148-205             JAXUCZ010000009.1  22053987-22054044   c
            206-337             JAXUCZ010000009.1  22053761-22053892   c
            338-409             JAXUCZ010000009.1  22053006-22053077   c
            410-504             JAXUCZ010000009.1  22052786-22052880   c
            505-562             JAXUCZ010000009.1  22052640-22052697   c
            563-997             JAXUCZ010000009.1  22052039-22052473   c
FEATURES             Location/Qualifiers
     source          1..997
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q12"
     gene            1..997
                     /gene="Crip3"
                     /gene_synonym="RGD1565018"
                     /note="cysteine-rich protein 3"
                     /db_xref="GeneID:501100"
                     /db_xref="RGD:1565018"
     exon            1..52
                     /gene="Crip3"
                     /gene_synonym="RGD1565018"
                     /inference="alignment:Splign:2.1.0"
     CDS             10..624
                     /gene="Crip3"
                     /gene_synonym="RGD1565018"
                     /codon_start=1
                     /product="cysteine-rich protein 3"
                     /protein_id="NP_001102773.1"
                     /db_xref="GeneID:501100"
                     /db_xref="RGD:1565018"
                     /translation="MSWTCPRCQQPVYFAEKVSSVGKHWHRFCLKCERCHSILSPGGH
                     AEHNGRPYCHKPCYGALFGPRGVNIGGVGCYLYNPPSPPPASSISLSPSNFSPPRPRT
                     GLPRAKKSPPYLKTFTGETSLCPGCGDPVYFAEKVMSLGRNWHRPCLRCQRCRKTLTA
                     GSHAEHDGMPYCHIPCYGYLFGPKGVNIGDVGCYIYDPVDIRPK"
     exon            53..147
                     /gene="Crip3"
                     /gene_synonym="RGD1565018"
                     /inference="alignment:Splign:2.1.0"
     exon            148..205
                     /gene="Crip3"
                     /gene_synonym="RGD1565018"
                     /inference="alignment:Splign:2.1.0"
     exon            206..337
                     /gene="Crip3"
                     /gene_synonym="RGD1565018"
                     /inference="alignment:Splign:2.1.0"
     exon            338..409
                     /gene="Crip3"
                     /gene_synonym="RGD1565018"
                     /inference="alignment:Splign:2.1.0"
     exon            410..504
                     /gene="Crip3"
                     /gene_synonym="RGD1565018"
                     /inference="alignment:Splign:2.1.0"
     exon            505..562
                     /gene="Crip3"
                     /gene_synonym="RGD1565018"
                     /inference="alignment:Splign:2.1.0"
     exon            563..997
                     /gene="Crip3"
                     /gene_synonym="RGD1565018"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgaagaacca tgagctggac ttgtccgcgt tgccagcaac ccgtttactt tgctgagaaa
       61 gtgagctccg taggcaagca ctggcaccgt ttctgcctga aatgcgagcg ctgtcacagc
      121 atcttgtccc ccggcgggca tgcagagcac aacgggaggc catactgcca caagccttgc
      181 tatggggctc tctttggacc tagaggggtc aacattggtg gtgtgggctg ctatctctac
      241 aaccccccaa gtccccctcc tgccagcagt atttccctca gccccagcaa cttcagcccc
      301 cccaggccaa ggactggcct cccccgggcc aagaaaagcc ctccctactt gaagacattc
      361 actggggaga cgtcactatg ccctggatgt ggggatcctg tctatttcgc tgagaaggtg
      421 atgtctttgg gcagaaattg gcaccgaccg tgcctgaggt gccaacgttg caggaagacc
      481 ctgactgctg ggagtcacgc ggagcatgat ggcatgcctt actgccacat cccctgctat
      541 ggctacctgt ttggccccaa aggtgtgaac attggcgatg tgggctgcta catctatgac
      601 ccagtggaca taagacccaa atgagccact cacgggagtg acaacctcat gccagctttc
      661 cacctttcct ccgaagtcct ctggaagctc cggaattctc tagtcctttg gggaggaagc
      721 aggcgacatc ctgggggctg ggacctaggt gtaggctctg tggtagacct gagtctagac
      781 tgtctctccc acttctgtgt ttccccattc ctaactggag gcacacacac acacacacac
      841 acacacacac acacacacac acacacacac acgcttagaa tggtggttgc ctgggctccc
      901 agtccttctc tcagcaatgc ttgagtttca taaagtgtat tcataaaggt cgtcgagctc
      961 tctggattcc gtaataaaat gtcaatcccc atacctt
//
