LOCUS       XM_039084545            5674 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cellular repressor of E1A-stimulated
            genes 2 (Creg2), transcript variant X1, mRNA.
ACCESSION   XM_039084545
VERSION     XM_039084545.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084545.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5674
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5674
                     /gene="Creg2"
                     /note="cellular repressor of E1A-stimulated genes 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 ESTs, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 41 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:316353"
                     /db_xref="RGD:1564056"
     CDS             289..1155
                     /gene="Creg2"
                     /codon_start=1
                     /product="protein CREG2 isoform X1"
                     /protein_id="XP_038940473.1"
                     /db_xref="GeneID:316353"
                     /db_xref="RGD:1564056"
                     /translation="MSLSGGESPAWPATRLSWLLCCSALLSPAAGYVIVSSVSWAVTN
                     EVDEELDSASTEEALPALLEDSSSIWQQSFPASAHKEDTHLRPRGSARARPAPAARGM
                     FSYRRESGSSEASPGPRVHAGTARSLAHASSWGCLATVSTHEKIQGLPFGSCLAISDG
                     PVHNSTGVPFFYMTAKDPAVSDLVKNPVASLMLPESEGEFCRKNIVDPEDPRCARLTL
                     TGRMVTVPPGEVEFAKQAMFSRHPGMRKWPRQYEWFFMKMWVEHIWLQKWYGGISDIP
                     KEEYFKAAPRKA"
ORIGIN      
        1 atcctgcaga aaaccaagac attccgtggc acgcgtggac tctgcgccca gcagcggcgg
       61 tgggcgcagc cgaggggact ctggtcttgc agcagacgtg ggttctcacc ggggtgtgag
      121 gcaataagga gaccttggcc cggggctgat caagacccca tacacacacc cgggaatcct
      181 accgcgggga gaagaggttc cgcctcacgc tccgccgcag gggggcgccc ctggctggca
      241 gctgcttggc tagtggtccc cgccacaggg cgcgtcgcct tcaagaagat gtcgctgtcc
      301 ggcggggaga gccctgcttg gccagcgact cgcctgtcct ggttgctatg ctgcagcgcc
      361 ctgttgtccc cggccgccgg ctacgtgatt gtgagctccg tgtcctgggc tgtcaccaac
      421 gaggtagacg aggagctgga cagcgcgtcc accgaggagg cgctgcccgc gctgctggag
      481 gactcgagca gcatctggca gcagagcttc ccggcctcgg cgcacaagga ggacacgcac
      541 ctgcggcctc ggggctccgc ccgcgccagg cccgcaccgg ccgcgcgtgg catgttctcc
      601 taccggcggg agagcggctc atccgaggca tcccccggcc ccagggtgca tgccggcacc
      661 gcccgctccc tagcccacgc tagctcctgg ggctgtctgg ccacggtgtc cacccacgaa
      721 aagatccaag gacttccctt tgggagctgc ctggccatca gcgatggccc cgtccacaac
      781 agcacagggg tccctttctt ctacatgaca gccaaggacc ctgctgtgtc cgacctggtg
      841 aagaaccctg tagcctccct gatgctgcct gagtctgaag gagagttttg cagaaaaaac
      901 atcgtcgacc cagaagatcc ccggtgtgcc cggttaacgc tcactggccg gatggtcacg
      961 gtgccaccgg gggaggtgga gttcgccaag caagccatgt tctcaaggca tccaggaatg
     1021 aggaagtggc ctcgccagta tgaatggttc ttcatgaaga tgtgggtaga acacatctgg
     1081 cttcagaaat ggtatggagg catatctgac atcccaaagg aggaatactt caaagcagcc
     1141 ccaagaaagg cctgatagta acacacaagt cccggggctt gctttaagat gaagaccttc
     1201 gaagggcaga agccagacag tctctgactg ccatctcttt gtttgaagag tacccagctg
     1261 ccctgtcatc ctacagcaga atgagaaagg atgaacaggg agccctgggc tagcgttgag
     1321 atccatcgga gtggtccttt gctgatccat catccacata gaaacgtttc tgttcactct
     1381 gtactcaatc cagaagctcc catttggaaa tcgtggttgt caaaaatgga agtggtagtt
     1441 gctattctgt tctttaaaaa aatgatgcct gtatatagca tgtcattgcc ttgtatcgtg
     1501 agaacattgt gttgcttacc acgcaaaagc cgtgccttgg atggcagtcc attgcttaac
     1561 aagagctgag catgcatcac gctgtggctg tgggttcagg gtaaggtgga aggctttcgg
     1621 tcggaaggtt attcactatg tcactaaatt gctgatgtat tttctagaac ctacgggtca
     1681 cttggggagc ctttcccccc actgtagtat agcaagcaga ctaagcacat gcagttttgt
     1741 gcttggcctg ttctgtgtga gcagactaca gcagaatatt aacaggaatg aggtagcttt
     1801 gtcattgagc ttcccagatc tcccgctgtt aatatttcct gtaggaagtg cccctctacc
     1861 actcatgaag tgtggtgctc atgaagtaag agcacctcta tctgtgcgat gtagcaaaga
     1921 cagaggcaag agtgcaaagg agaaagggaa agcagtgggc aagagaaaga gcctgagagt
     1981 ctgctcactg cctagcctca ggccagaccc tcaacagaat cacctcactt aagccctacc
     2041 tagtaaggtg tctcattcat acccagagac taggcttaga gaaagccagc cagcatccta
     2101 agctcaggct cctgcgttca ctgtacacaa tgggtgtgtg ttttccacag agggtcatca
     2161 agcaagggtt gtgattttaa aggacaatga caaactgccc tgctgggagt gctgggtgca
     2221 gaggtaggga gcacgctttc aactttttca acaaatcatt tacaagagtt cctggcattc
     2281 agaagataca aaattgaaac tgtatacata cctgaggcct gactggacca gaactcacac
     2341 caccaaggcc aagttttcta tctttccatg atggctagaa attctctgtg attgatcagg
     2401 tatgttgtat aacataacac atcactaacg tagaaaatat atacattctt aaaataattt
     2461 taacaaagca agatgcaagc tgacttgtta aaacatattt aaggggttgg ggatttagct
     2521 cagtggtaga gcacttgcct aggaagcgca aggccctggg tttggtcccc agctccgaaa
     2581 aaaaagaaca acaacaaaaa aacatattta agtacttatt actagaaacc tagtagggct
     2641 ggacagtcct tttttatttg acataagcca gttcacaaga gttcccaaca atcattattt
     2701 ctagtacaaa atcataggat ggctttgtta gaggtatttc ctattgctag agtttaaaat
     2761 tattgctact cccaatttag aagaaggttg gaggactggc agaacaaact gcaggttata
     2821 ggtgttccat aggtcaacct ccgacatcaa tccttgaagc accactgcct ctcatggctt
     2881 cttcaacatg gcttctcagt ccacctcact gatacctttt gctctgttag cttgctgtga
     2941 gttagctcct taagagttac tgatgcttcc aaggctttga agagcaggtt gcaatcacaa
     3001 accgcaaaga gtgttatcag acatttatca gagttacaag aaatgaaatc tgaactgtct
     3061 ggacagcaac aacagtgttg aaagttaatg ggcttgaatc agatgctccg tcttcaggaa
     3121 aatttgtttc agcaaatctc caggaattta caatgaatta aaatgtgtgg ttttagacat
     3181 aaaattagaa gatttagaca tagcaataag gcaagaaaaa gaaattaaaa gtgtacagat
     3241 tggaaagaaa ggaataaaag tctccttatt tacaatgaca tgattaacta catagaaaat
     3301 tgcacataat ttacattttt aaagccagca gaagctggag agacagttca gctgttaaca
     3361 gctctggttg ttcttccaaa tgatccaggt tcaattccca gcacccacat ggcaactcac
     3421 aactgtatgt aactctagtt ccgggggatc tggagccttc acacagacac ccatgcagac
     3481 aaaacactaa tacacataaa attaataagt aaataatatt tttaaaagga gagacccaca
     3541 cacacacaca cacacacaca cacacacaca cacacacaca cacacactaa agtcaggaac
     3601 agcctttagc aaatgtgatg gaacatgtgg acactcatag tgaaccctgg gctaacctca
     3661 gactttacat taaaaactaa gaagagctca cacttgtaaa cataagaaag tgaaactata
     3721 aggctataaa aagaactaga aaacctttgg agcaagggct tggcagagtg ttttttgtac
     3781 tttataaaac accaaagcat aacctataaa aggaaatttt gattaagtta tatctcatta
     3841 aattttaaag ggttggctat gcaaaggact ttcctaagag gacaaaaaac aggtgatggt
     3901 gacagaagat ctgcagacaa gtgctagtgt taagagtata cccaaattgg agcaaaggtg
     3961 tgaaggaagc agatagtgat acactgctgc ggggaacatc aactagaact agaaaaccac
     4021 ttgactcttt cctaaaacac taaataatgc acctgcctac caaccagaaa taagaaactg
     4081 gtcccagaga aatgaaaact taccactcac acgaagactt acatatgatg gggtcagcaa
     4141 gacggtcact cttggaatcc actagatgtc ctttaatcct ttgatctggt atctagcaat
     4201 acaaactgtg gcattatcta taccatagaa tagcactcag caatataaag gagctaatta
     4261 ctgacacaag cagctttggt gactctgtgg aagattatgc aagccataga agtgttcata
     4321 tcatatagtt ccatccatgg aacactccca atggggtctt taagaatgaa gacttttcag
     4381 aaaggaggtc acagagtgag tgaatcttac tgtgagtgga taatgatgga tccttatggt
     4441 gatggaggta cgcatacctt gacctaaatc attattaaat tggaaactgg gtaagacgaa
     4501 tacaggatct ctctgtgtta tttcttaaaa ctgcacctgc atctttaatt atctacagca
     4561 cctacagcta cctcagaggg aagtatttaa tggaaagact caagtaagac atgcatgcat
     4621 cttgcttgtg agtccctaac tgagatgaac tgttccatat caaaatgtag cagagaagat
     4681 gcaggatgaa ctgttaccaa agtgtagcag agaagatgca ggatgaactg ttaccaaagt
     4741 gtagcagaga ggagacaaga tgaactgttc catatcaaaa tgtagcagag aggagacatg
     4801 gcccttgtta atcactaata tttgcaggag ccttgtaact cttcttttaa aagttttcta
     4861 aatgtattca agttaatgct gaacacaaac gactaagaac ctggcaggac ctggaggaca
     4921 gctcagccga gcctttgctt agcatgaaac acgggcgtaa ccccagcacc atgaaaatga
     4981 aaatggcata gatgtgcctg catgtgccgt acaaattttc tacaagacat ttagaagaga
     5041 tgagtttctt caagtttctg gcgtacacat gttgagtata tataagcaat caagtctgaa
     5101 aataaggttt tctcgttgta ttcccagtaa tcatcctcta atttgggcag gggatagcct
     5161 tcgctaatgt atttgctgtg gcttgccaca accatgaagc taacacatag agtgagattc
     5221 tgctgctccg ggtgcccaca taccttagtg catattgact cttggtgacc atattctttt
     5281 aggattgaaa tgtgttctga agttgtcccc aaaagtcttg tatttcactg ttaataacat
     5341 aactgtcact agtgaagtat ttcttgatgg cagacttctc taggataacc tactgatgtt
     5401 cattcgattg tggtctcaag tcacttatgg gaaacttact tgtggtttgt ctgtcttgag
     5461 taaggcatgt ggaacacaaa gtccatcttc acaccaggta tgtctgtttc atcaaagacc
     5521 aattcattcc tagtacagct tctgtgcttg actatgctat cctaactata ctgtgtggtt
     5581 ttacatagtc ttttttatgt actattataa agcattgtta ggttcttaaa aagagtagag
     5641 gctactgcag tacctctgct ggaaacctat ccaa
//
