LOCUS       XM_039092919            6906 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus capping protein inhibiting regulator
            of actin dynamics (Cracd), transcript variant X1, mRNA.
ACCESSION   XM_039092919
VERSION     XM_039092919.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092919.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6906
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6906
                     /gene="Cracd"
                     /note="capping protein inhibiting regulator of actin
                     dynamics; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 30 ESTs, 1 long SRA read,
                     3 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:289568"
                     /db_xref="RGD:1311575"
     CDS             72..4082
                     /gene="Cracd"
                     /codon_start=1
                     /product="capping protein-inhibiting regulator of actin
                     dynamics isoform X1"
                     /protein_id="XP_038948847.1"
                     /db_xref="GeneID:289568"
                     /db_xref="RGD:1311575"
                     /translation="MSFNCSMGARAFSHDSIFIPDGGAESEQTVQAMSQDSILGKVKT
                     LQRQLGKNIKFGQRPSNVIPMKKAGSADASSEEDFVLTSPMEIVTQQDIVLSDTENKS
                     SDTPSSSSPLNLPEAGSDMEEKVAPVKPSRPKRHISSAGTIESVNLDAIPLAIARLDN
                     SAAKHKLSVKPKNQRVSRKHRWLAQDRQNAPGSFESQSSLDQNGQLGEDKHIGQGEEP
                     EPLESHEEKRLQEDYWRELEAKCKKQKAEAAEKRRLEEQRRQALERRLWEESLRQELL
                     EEEEEEAEEVGLLLQAGKAPPEEGPQSGLEEQRGSEQELGEADDPTRLEAEERRREQE
                     KAERQAEKLRQREEAERQEEELRQREEAERQAEELRQREEAERQEEELRQREAENQEE
                     KLRQREAEKQEEEVRQREVEGQEEELKQREAKRQEEELRQLEEAERQEKLRQREAQKQ
                     EEEELRQREAERHEKLRQHEAERQEEELRQRERQRAQEEEAKRMLQEEEEAKHIEELK
                     GREKEAPEPLVEEGSQGPEGESQPWLTDDADQQSPLQRDLEKPGEREDLVSAGQRDIP
                     EDQRGEVEMAIEPVEQSGDWGAHFGGVDGVDVEGKEASQIDNPQPQERQKEGTPAREE
                     KEATAADIDRKVEELRWQEVDERPRPYTFQVSSGSRQILFPKVNLSPVTPAKDASLAP
                     AAQEPPAPRGAASHALPSALSIPHTAILVTGAQLCGPAVNLSQIKDSACKSLLGLSEE
                     KRPADVPTVEPRAGGGKSKPAPESPSNAVALAEWASIRSRILKNSEGDQRGDREPARV
                     GDEPAPRARCDSRGNVRKTPPVNAKFSIMPAWQKFSDSGAETFKQSTDGESVRKKPGP
                     APSEETTPTPQPLPAGAPELQKNLEKQEVSQEPPDTTDGCKFAKDLPSFLVPSLPSPQ
                     KAASRTESTTSLDSETTSDVGSPDPAMPGGEEKASPFGIKLRRTNYSLRFHCDQQAEQ
                     KKKKRHSSTGDSVDGDAPPGERNPEATFLKHGPSLPQERRPALAPRRDSAESHPSGHC
                     VAAAVHPGLPPASGQTPAPEQDKVASKTPLSMQKPALAPKPASQTPPSSPLSKLSRPH
                     IVELLTRRAGKLDSEPSEPAKENQESRDSQPPSPSLLEEPKGQKRDEKDVLEKKPASP
                     PLPSSQQERPSLTPETGRKEKPMLQSRHSLDGSKLTEKAETAQPLWITLALQKQKGFR
                     EQQATREERKQAREAKQAEKLSKETASVSQQPGSSRVSKAGSVHKPAAPSEEKKPETA
                     VSKLQRREQLKKSNTLPTSVTVEISDSAPSAPLVKEVTKRFSTPDAAPVSTEPAWLAL
                     AKRKAKAWSDCPQIIK"
ORIGIN      
        1 ctttcatcta cccggctcct tgtcaaccct ctgcaggaag gcctcgaagg gctttctgac
       61 taagctgaga gatgtccttc aactgctcta tgggagcacg ggcattctct catgacagta
      121 tttttatccc tgatggggga gcagaaagtg agcagacagt tcaagcaatg tcacaggaca
      181 gcatcctggg caaagtcaaa actcttcagc gacagttggg caagaacatc aagtttgggc
      241 aacggccgtc taacgtcatt cccatgaaga aggcaggcag tgcagacgct agctcagaag
      301 aggacttcgt cctcaccagt cccatggaga ttgtgactca gcaggatatt gtcctctcag
      361 acacggagaa caaatccagt gatacaccaa gttcctcaag tcctctaaat ctacctgaag
      421 ccggaagcga catggaggag aaggttgctc cggttaaacc ctctcggcca aaaaggcaca
      481 tctcttctgc tggcaccatt gaaagtgtca acctcgacgc catccccctg gccatcgctc
      541 gtctggacaa cagtgctgcc aagcacaaac tctctgttaa gccaaaaaac cagagggtgt
      601 caaggaagca caggtggctt gcccaggacc gacagaatgc accaggcagc tttgagagtc
      661 agtcctccct ggaccagaac gggcagctag gagaagacaa acacattgga caaggagagg
      721 aaccagaacc tctggaatcc cacgaggaga aaagactaca ggaagactat tggcgggaac
      781 tcgaagccaa gtgcaaaaag caaaaagctg aagccgctga gaagaggcgc ctggaagagc
      841 agaggcggca ggcgctggag aggaggcttt gggaggagag cctcagacag gagctgctgg
      901 aggaggagga agaggaggct gaagaggtag gcctgttgct acaggcaggg aaggcacctc
      961 cagaggaagg gcctcagtct ggtctggagg aacagcgggg ttcagagcag gagctggggg
     1021 aagccgatga ccccacccgc ctggaggcag aagagcgcag gcgtgagcag gaaaaggccg
     1081 agaggcaggc ggagaaactg aggcagcgcg aggaggccga aaggcaagag gaggaactga
     1141 ggcagcgcga ggaagccgag aggcaggcgg aggaactgag gcagcgcgag gaggccgaga
     1201 ggcaagagga ggaactgagg cagcgcgagg ccgaaaatca agaggagaaa ctgaggcagc
     1261 gcgaggccga gaaacaagag gaggaagtaa ggcaacgtga ggttgagggg caggaggagg
     1321 aactgaagca gcgggaagct aaaaggcaag aggaggaact aaggcaactc gaggaggctg
     1381 agaggcagga gaaactgagg cagcgcgaag cccagaagca agaggaggag gaactaaggc
     1441 agcgagaggc tgagaggcat gagaaactga ggcagcacga ggctgaaaga caagaagagg
     1501 aactaaggca gcgggagagg cagcgggccc aggaggagga agccaagagg atgctgcagg
     1561 aggaggaaga ggccaagcac atagaagagc tgaaaggtcg ggaaaaggag gcaccagagc
     1621 cactggtgga ggaaggctcg cagggtccag aaggagagag ccagccttgg ctaacggatg
     1681 atgctgacca gcaaagccca ctgcagcggg accttgagaa gccaggggaa cgagaagacc
     1741 tggtatccgc agggcagaga gacatccccg aggaccagag aggagaggtc gagatggcca
     1801 tcgagccggt ggagcagagc ggagactggg gcgcgcactt cggtggtgta gacggtgtag
     1861 acgtggaagg gaaagaagcc tctcagatag acaacccgca gcctcaagag agacagaagg
     1921 aaggcacgcc ggcccgggag gagaaggaag ctaccgctgc agacatcgat cgaaaggtgg
     1981 aggagctccg gtggcaggag gtggacgagc ggccccggcc ctacacgttc caggtatcct
     2041 ccgggagtag gcagattctc ttccccaaag tcaacctgag cccggtgaca cccgccaagg
     2101 acgcgagcct cgccccagcg gcccaggaac cgcccgcgcc ccgcggtgcc gcctcgcacg
     2161 ccctgccctc ggcgctgagc atcccacaca cggccattct ggtcactgga gcgcagctct
     2221 gcggccctgc ggtcaacctg agccagatca aggactcggc gtgcaagtcc ctcctgggtc
     2281 tatcagaaga aaagcgccca gcggacgtcc ccaccgtgga gcccagggcc ggtggcggga
     2341 agtccaagcc tgccccagag tcaccgagca acgcggtcgc gctggccgag tgggcttcca
     2401 ttcgatccag aatcctgaag aactcggagg gcgaccagcg tggcgacaga gagccggcca
     2461 gggtcggcga cgagccagcg ccccgagcta ggtgcgattc ccgagggaac gtacgcaaga
     2521 cgccgccagt caacgccaag ttctccatca tgcctgcctg gcagaaattc tcagacagcg
     2581 gcgcagagac cttcaaacag agcacggacg gtgagagcgt gaggaaaaag ccagggccag
     2641 cgcccagcga agagacgaca ccgacacccc agcctctacc tgcaggggct cctgaactcc
     2701 agaagaacct ggaaaagcaa gaggtaagcc aggaaccacc agacaccact gacggatgca
     2761 aatttgccaa agaccttcca tctttcctcg tcccgagcct gccttctccg cagaaagccg
     2821 cgtcccgcac agagtccacg acctctttgg acagcgagac cacgagtgat gtaggaagcc
     2881 cagaccctgc gatgccggga ggtgaggaaa aggcctcgcc ctttggaata aaactgagaa
     2941 ggaccaacta ctccctgcgc ttccactgtg accaacaggc cgagcagaag aagaaaaaga
     3001 ggcacagcag cacgggagac agcgtggatg gggacgcccc tcctggagag aggaatcctg
     3061 aagccacgtt cctcaagcat ggcccatccc ttccccagga gagaaggcca gccctagccc
     3121 ctcggaggga ctctgctgaa agccatccta gcggtcactg tgttgctgct gcagtccacc
     3181 ctgggcttcc accggccagt ggccagaccc cagctccaga gcaagacaag gtagcgagca
     3241 aaacgccgct gtccatgcag aagccggccc tggctcccaa gcctgccagc cagactccac
     3301 cttcatcccc actctccaaa ctgagcagac cccacatagt ggagcttctc actaggcgag
     3361 ctgggaagct cgactccgag cccagcgagc ctgccaagga gaaccaggag agcagggata
     3421 gccagccacc ctcaccatca ctgctggagg agccgaaggg gcagaagagg gatgagaaag
     3481 atgtgctaga aaagaagcct gcttccccgc ctctgccatc cagtcagcaa gagagacctt
     3541 ccctaactcc cgaaacaggt agaaaagaga agcccatgct tcagagcagg cactccctcg
     3601 atggctccaa gttgacagag aaagctgaaa ctgctcagcc actgtggata acattggcac
     3661 tacaaaagca aaagggattt cgtgagcagc aagcaactcg ggaggagagg aagcaagccc
     3721 gggaggcgaa gcaagcagaa aagctctcca aagaaaccgc cagtgtcagc caacagcccg
     3781 gaagcagtcg ggtgagcaaa gctgggtcgg tgcacaagcc tgcagctccg tctgaagaga
     3841 agaaaccaga aacggcggtg tccaagctcc agcgcagaga acagctgaaa aagtccaaca
     3901 ctctccccac gtctgtgaca gtggagatct cagattctgc accctcagca ccgctggtaa
     3961 aagaggtcac caagaggttc tccaccccag atgctgcccc cgtgtccaca gaacctgcct
     4021 ggctggcttt ggccaaaaga aaagcaaagg cctggagcga ctgcccacaa attattaagt
     4081 aaacagtgac tcttatccat cttgtggcca gttgttggct cttctcttgc cctttttatt
     4141 tatttatttt ttatatgggg taacgaaacc aggctaggga aaagaagcat gtttttatag
     4201 gctctaaaat aatgtttaga aacagaactg gtggtgttca ttgtaaagag tgtatttgca
     4261 caaccctggg tcctggtgcc ttgagctccc cctggttctc aagagacagc tttgtctgag
     4321 ggaccatgtg aagcaaaatc tgcaagtgag agttcctctg gagagccgcc atgccctccc
     4381 atggccttca catatgcaca cccatgcacc atttcaggac atgtcctttt gccaatcttt
     4441 gtaagttgtt ttgattctct tctgtctaaa acatcggccc tactatgttt gcatatgtca
     4501 cagtgacagt ctcacatata cataaaacat ggtgttactc tcctgaatgc agtaacggga
     4561 aaataaggaa aaaagctggc tcccaactct gtgcctatgt ctggttttca tgaattctcc
     4621 ccgccctaaa aacccactcc cgctcctcct acactccatc cccttttaaa gacatatgga
     4681 ccgttaggcc tctctggctc ctatggaaca tttgtattta acctggtgat aaaaaggaaa
     4741 ttctgtgtca gacttgtctc tgggaatctc tacatagtgc agtgactcat ctgcagcctg
     4801 ggctgcatcc ccagactctg ggagcagagg gcttagaata tacagtttag gggaaactct
     4861 tcagatgaac tctgttataa tccaaaggtc aagaaccttg ggttagactg gtataatgga
     4921 gcttttcaca ctgtgaagaa aaggatgcga aagtgagaac aaggaaataa aaaacgtcac
     4981 ccacaccagc cacgtatgta tgatagttta ggttaccggc gttccatgac tccaaagttt
     5041 tcccttggcc tgtagggaaa atgaacaagc caagatgtgt aacctatctg tactaaggac
     5101 ttccagcaga gaatttcttt ttcctttttc tttactgtac ttgaataatt cagagtcgaa
     5161 tgttccaaag catttacaat ttagagcatt caccttgata cctttaaaaa aaaaaagcat
     5221 ctcagagttt tacgtggcct tgttatcata cacatgtgca tacaaagaag ggacttggca
     5281 gtttcaaagc cacatgtatt tatttctcta gatttgcttt gcgtgacact agacgtacca
     5341 gcaaacgccc acgtgctgct ggtgctagct ttgtatttca tgctgctggc attttttcct
     5401 tcttgtagat tcttactcta aaacgtaggt gcggattctt tgcccagtgc ggggaggggg
     5461 ggggacttac tcccttcctc ctcccacact aacatgtctt agagcatcca ttacgacttc
     5521 tcctttgtgc tgccgttctg tctaccctac aggatggcag ggaagctgtt tgccatataa
     5581 gaaatcattt tctccctaga aacaatagct cggcttcatg aagcagctgg catgtgcggt
     5641 caagtggaga gctgtactat tgaagttgga tttagtatta catgtactgg accttccttc
     5701 agactgttaa gaatcaatgt gactcttttt ttttttactg tttatgtaaa caactaatat
     5761 acactgcacg cttcccacac aggtgttcat tcctaaactt cctgcgtaga caattgttag
     5821 tttaacaatt tcctcactgt tataacactt ttgagtggga atctttccac gtaaagccct
     5881 agaatgatag tgctacagtg attcttccaa attaacttct tcttccttcc tgcctgccag
     5941 ctttggccag taccacagtc atagcaggaa acgggtacag aaataagatg attaagacat
     6001 aatcgggctg gcatggtggt gcattgcctt tgatccaagc attttggggg gcagaagcca
     6061 agtggctctc tgtgttcaag ggcagtctgt tgtacacagt gagctccagg ccagccaagg
     6121 ctatgcaatg gagaccctgt cttaaaacaa ggaaagaaag agtagtggat gcattcagac
     6181 tggctcagcc acgagcccca cacgcagcac aagaaacagc ctagttaaaa atgcccccac
     6241 taatgtcctg gaaagaagaa tctcctgagg aaaaggcagt catcatactt gctaaagagt
     6301 acatgtttaa catttcatta aaatcactcc aagcctgcac taaataccaa tcaagtgtta
     6361 ttctgctcat ttctgggttg cgcttttctg agcaacaaac tacggggaaa ttctgtgaaa
     6421 acaaacaatt caagactttt ccttttttta aaaaaaatga atgactgctg tattaaatat
     6481 atgaatatat aagctttttt ttaatttaaa cacacttctg gcaaggttat agatgattaa
     6541 cctctgttca tagacttata tatggaagta gaattttttg tttactttga aaatgtttca
     6601 agtgcaattg tttcttataa aacatggttg attaccatta aattctcatg gtagctggtt
     6661 atctgcaaat atatagaatg tattccccgt ctcttcttgt gatgtttagt gtgcttattt
     6721 taaagcagca acattagcta caagtgtctt gcaatatttt taccaacaat aaaattaagt
     6781 agatacttaa taaaaattcc ttagtgtgat tttaatatta ttttgagatt tgggttgagt
     6841 accgcttgaa atataaaaag gcccattatt taagggataa gacctttcaa taaaatactg
     6901 acaaga
//
