LOCUS       NM_001007703            1998 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus ceramide-1-phosphate transfer protein (Cptp),
            mRNA.
ACCESSION   NM_001007703 XM_233718
VERSION     NM_001007703.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Mishra,S.K., Gao,Y.G., Deng,Y., Chalfant,C.E., Hinchcliffe,E.H. and
            Brown,R.E.
  TITLE     CPTP: A sphingolipid transfer protein that regulates autophagy and
            inflammasome activation
  JOURNAL   Autophagy 14 (5), 862-879 (2018)
   PUBMED   29164996
REFERENCE   2  (bases 1 to 1998)
  AUTHORS   Simanshu,D.K., Kamlekar,R.K., Wijesinghe,D.S., Zou,X., Zhai,X.,
            Mishra,S.K., Molotkovsky,J.G., Malinina,L., Hinchcliffe,E.H.,
            Chalfant,C.E., Brown,R.E. and Patel,D.J.
  TITLE     Non-vesicular trafficking by a ceramide-1-phosphate transfer
            protein regulates eicosanoids
  JOURNAL   Nature 500 (7463), 463-467 (2013)
   PUBMED   23863933
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083599.1.
            
            On Nov 29, 2004 this sequence version replaced XM_233718.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083599.1, CK595923.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1998
                     /gene="Cptp"
                     /gene_synonym="Gltpd1"
                     /note="ceramide-1-phosphate transfer protein"
                     /db_xref="GeneID:313771"
                     /db_xref="RGD:1359656"
     exon            1..271
                     /gene="Cptp"
                     /gene_synonym="Gltpd1"
                     /inference="alignment:Splign:2.1.0"
     exon            272..406
                     /gene="Cptp"
                     /gene_synonym="Gltpd1"
                     /inference="alignment:Splign:2.1.0"
     CDS             285..935
                     /gene="Cptp"
                     /gene_synonym="Gltpd1"
                     /note="glycolipid transfer protein domain-containing
                     protein 1; glycolipid transfer protein domain containing
                     1"
                     /codon_start=1
                     /product="ceramide-1-phosphate transfer protein"
                     /protein_id="NP_001007704.1"
                     /db_xref="GeneID:313771"
                     /db_xref="RGD:1359656"
                     /translation="MDGPERDFNLKVVLISFKKCLTDKGEVLLDHYTASWKGLVRFLN
                     SLGAVFSFISKDVVSKLQIMEHLRSGPQSEHYISLQSMVAYEVSNKLVDRDSRSRPRH
                     PNSGCRTVLRLHRALHWLQLFLEGLRTSSEDARTSTLCSEAYNATLAAYHSWIVRQAV
                     NVAFHALPPRKVFLEAMNMGSSEQAVEMLGEALPFIEQVYDISQKLYAEHSLLDLP"
     exon            407..1973
                     /gene="Cptp"
                     /gene_synonym="Gltpd1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggctgggctt taggtggcag ctcaaggttt cttcccaacc gcaggctgcg agcttggggg
       61 aaagcatagg gatgggagct cttacctgac agtgaactag gcagcagagc catgcctctg
      121 tagaccaccg gaacggaggg caaagattcg tcacccacag cagcctaatt atagctttga
      181 tcaacccccc ccatcactga ccttccctgc accctttgcc ctccgcggga gtaaagaacc
      241 accactcacc ccccaccgga acccgtctca gttcgtgttg gaagatggat ggcccagaga
      301 gagatttcaa ccttaaggtt gtcctgatca gcttcaagaa gtgtctcact gacaagggag
      361 aggtgctgct ggaccactat actgccagct ggaaggggct tgtcaggttt ctgaacagcc
      421 taggggctgt cttttcattc atctccaagg atgtggtctc aaagcttcag attatggagc
      481 atctgagaag tggcccacag tctgaacact acattagctt gcaatccatg gtagcctacg
      541 aggtgagcaa caagctggtg gacagagaca gccgctcacg tccccgacac cctaactcag
      601 gctgccggac tgtgctgcgc ctacaccgtg ctctgcattg gctacagctg ttcctggaag
      661 gcctgcgcac cagctctgag gatgctcgta cctccaccct ctgcagtgag gcctacaatg
      721 ccacactggc tgcctatcac tcctggatag tacgtcaagc tgtcaatgtg gccttccatg
      781 ccttgccccc acgcaaggtc ttccttgagg ccatgaatat ggggtcctct gagcaagcag
      841 tggagatgct gggagaggcc ctgcccttca ttgagcaagt gtatgacatc tcccagaagc
      901 tctatgctga acattccctg ctagacctgc cctagtagtg gtaaccatac tgtgtggact
      961 tcccctgctc agaactgggt ttgggcaatc tagggctact cccacagcag ggctttctgg
     1021 aaactactgt cacccctgta agctgaactg gtggaaagcc agtctgtgaa aagaaaggtc
     1081 gtgggcagct gaaccaagaa aggtgaatgc tagtcatcct cttggttcag gatgagacag
     1141 ttgaactcca gttttgccct ccacttcagt catgtgttca gtcaggcttg attgaagtgc
     1201 agatggaaaa tggagaagtg gggggcggtg tcatgtatct gcaacaaccc aaggttgctc
     1261 tacctctcct gtatagaatc tgaaatggta taaggaccca ggacccagga gctgtcttcc
     1321 ctacagccaa catgcccagc caatgtgtat cctacatgtc tggggcccct tcatattcca
     1381 aaagctgtaa catgggtaac atgaagttcc tctggcagtg gcatgagtcc ctgcccttca
     1441 cctgcttcct tgttagtctc tctgcatacc aaacaggccc ttgcctcctt ggaaatggaa
     1501 actgtatgaa accaatagct gaggcttctc taagaaagcc tgccctggtc agtgcagcct
     1561 gttccacagc ttctccagta tagtaccgtc agccttctga aggtggcttc ttacaacaca
     1621 tgtaccccca ggattctaag atgtcaatac taactggcca aaccatacct ctctctagcc
     1681 agccctgctg ctcctgttgc cataatacgc agatgactta ggacatgact tgtgggagga
     1741 gactaggccc ctttgtctga cagatggcca tacctagcat ggctaatacc cagtgtataa
     1801 gaccataagc tttcccactg ggtcttaatg ttaaacccga ggacaatgcc ctcagcgtag
     1861 ctgatgtgtg caaatgcaaa ctttgggggg cacatctctt tccttaagaa ttgtgatcta
     1921 tgtatttcca acataaataa attacaccta catgattggg tatagcactc tggaaaaaaa
     1981 aaaaaaaaaa aaaaaaaa
//
