LOCUS       NM_001109295            3392 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus complexin 3 (Cplx3), mRNA.
ACCESSION   NM_001109295 XM_001071808 XM_576417
VERSION     NM_001109295.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3392)
  AUTHORS   Mortensen,L.S., Park,S.J.H., Ke,J.B., Cooper,B.H., Zhang,L.,
            Imig,C., Lowel,S., Reim,K., Brose,N., Demb,J.B., Rhee,J.S. and
            Singer,J.H.
  TITLE     Complexin 3 Increases the Fidelity of Signaling in a Retinal
            Circuit by Regulating Exocytosis at Ribbon Synapses
  JOURNAL   Cell Rep 15 (10), 2239-2250 (2016)
   PUBMED   27239031
REFERENCE   2  (bases 1 to 3392)
  AUTHORS   Reim,K., Wegmeyer,H., Brandstatter,J.H., Xue,M., Rosenmund,C.,
            Dresbach,T., Hofmann,K. and Brose,N.
  TITLE     Structurally and functionally unique complexins at retinal ribbon
            synapses
  JOURNAL   J Cell Biol 169 (4), 669-680 (2005)
   PUBMED   15911881
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001109295.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.804170.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840113 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-549               JAXUCZ010000008.1  66905652-66906200   c
            550-637             JAXUCZ010000008.1  66904358-66904445   c
            638-3392            JAXUCZ010000008.1  66899438-66902192   c
FEATURES             Location/Qualifiers
     source          1..3392
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..3392
                     /gene="Cplx3"
                     /gene_synonym="RGD1560104"
                     /note="complexin 3"
                     /db_xref="GeneID:501005"
                     /db_xref="RGD:1560104"
     exon            1..549
                     /gene="Cplx3"
                     /gene_synonym="RGD1560104"
                     /inference="alignment:Splign:2.1.0"
     CDS             386..862
                     /gene="Cplx3"
                     /gene_synonym="RGD1560104"
                     /codon_start=1
                     /product="complexin-3"
                     /protein_id="NP_001102765.1"
                     /db_xref="GeneID:501005"
                     /db_xref="RGD:1560104"
                     /translation="MAFMVKSMVGGQLKNLTGSLGGGEDKGDGDKSAAEAQGMSREEY
                     EEYQKQLVEEKMERDAQFTQRKAERATLRSHFRDKYRLPKNETDESQIQLAGGDVELP
                     RELAKMIEEDTEEEEDKASVLGQLASLPGLDLSSLKDKAQTTLGDLKQSAEKCHIM"
     exon            550..637
                     /gene="Cplx3"
                     /gene_synonym="RGD1560104"
                     /inference="alignment:Splign:2.1.0"
     exon            638..3392
                     /gene="Cplx3"
                     /gene_synonym="RGD1560104"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aagccgaagt cctggtttcg gatgacccag gagaagagga cattggaggg taggaagcgg
       61 aaatcaaggc acacttcagc gcagcccctt ctcccagggc agcgacccca ccaccgcgat
      121 ccctaatcag ttgtcagcag tagccagcag agctttgctg gcgctaaaga aggcacgtgg
      181 gaaaggcggg agtgaggagc aggcacgtgg tccaggcttc tcagccccgt gcatgccccc
      241 cgccccccgt gaggagggtt ttgggaaggt agggaccagt gctcaaagct tggggcgcga
      301 gctcgcaacc ggagctgtcc ccgggactta gtgctgaagt agtcgctgac gaaccaggcg
      361 cctggtgcgg tggccagaga agaccatggc gttcatggtg aagtccatgg tgggtggcca
      421 gctgaagaac ctcaccggta gcctgggggg cggcgaggac aagggggacg gagacaagtc
      481 tgcagccgaa gcacagggca tgagccgaga agagtatgag gagtatcaga agcaactggt
      541 ggaggagaag atggagcgag acgcacagtt cacacagagg aaggcagaac gggccacgct
      601 acggagtcac ttcagggaca aataccgtct gcccaagaat gagacggatg aaagccagat
      661 ccagctggca ggcggagatg tggaactgcc tcgggagcta gccaagatga tcgaggagga
      721 cacggaggaa gaggaagata aggcctctgt gcttgggcag ctggccagcc tccctggctt
      781 ggacctcagc tcactcaagg acaaggccca gactacgcta ggggacctca agcaatcagc
      841 tgagaagtgc catatcatgt gaccgcttcc cctgggtttg cctctaggat ggccagaggg
      901 tcggtcccat gtgagggcta agagagtgag tgtctcaact tccagatacc tccagtccat
      961 ttgggctctg ttttccctgc cccagcctag cctcagagcc ttctcatcca tgtccagctg
     1021 tccagctctc tctctctctc tctctctctc tctctctctc tctctctctc tctctagcaa
     1081 agttcctatt cttccctctc tccctctgct gcctggaaag tttcccaagt tgatagaatt
     1141 agcccaaccc tctctgggta cagccccctg ttcttcacac aagagcactc acagaaagac
     1201 acagaagccc cggctcgttt gccacagatg catcctggca cacacagaca cacatccctt
     1261 ggattcccag cccctccaga taccagcact cagatgctta ggcgagcctc tgggcacaca
     1321 gaagacctgt tcttatccct ccctcccttc gtaatcctag aagcttttgc tctttccgag
     1381 ttttatctta tcatctgtaa aatgggaatg gactgagtga tttccaaaat tctgtcccga
     1441 ttggcattcc tggccactca ggacagagcc cacatccctt cttgggcagg gcagcagctg
     1501 cagtcacagc atcacacagc tgccactgtg ggttctggga actgagcaat gctgtgtgag
     1561 gggcagagtg ccaggtatgg aactggcact gaacagtagc tccagacctc ctctgggccc
     1621 agggctgagc caaattttgt tctgttcctg tagaagtctc tgtagtccat agttggaatt
     1681 tcctcttctt gttcagcaaa aaataaaaat tccaaatgac gtggctatct tcccacttcc
     1741 tgctgacctg gggttcacag gccccaggcc tgccctttga ggggtatcat ctgcctcttc
     1801 acctgcagct tcagggggtc ctaggtgaag aacgggggct tctgtggggc tctctagtga
     1861 cagcccttgt aagagtgcct ctcagggtgg caggtgaagg gggtctcact gagggagcag
     1921 atgccctttg ggctggatga agttcagtct gagcaccaag agtgaggagg atgtggcagg
     1981 aggcagctga atggagaggt atacgggaag atggagcctt agggtgtttc ctgagatcag
     2041 agaaggggct gtctctaaca ctggtcctgt actttcccct cacctcagag atggagcgtg
     2101 aaacagagaa gaaagggtga ttgtgcccca gcctggctct gtgtgtgtac ttcagtaggt
     2161 ccctgagcct gcgttcctct tggtaaaatg aacagttctc ttccccaaga ataataacat
     2221 gtatttcaaa gagtggccat ttgtccctgc cccctcctcc tcctggcagt gctggggact
     2281 cagggcctca cacactgcat actaaggcaa gtggtctgcc actcagcctc acccacggcc
     2341 cctgagaatg acgcttatca gctgtggtaa cacattcttt aaagtaacag aggcggaggc
     2401 accagcagtc atgctacact gagtgagacc tgctggtgaa gacagtgtta gtcccacctc
     2461 gcagggaggt ggcctgaggt ggtaagctgg tgccctcaaa gtttgtgttt gtgtttatgc
     2521 agtgaattag tttcagtcag atttcttctc tttgtgtccc tccctccctc cttccttctc
     2581 acctcccttc ctccttctct ccatctctct ctctgtgtta gttggtatta ttgtcatttt
     2641 gttttcttcc agacagaatc ttgtgtagct caggctagcc tcaaactcct aggtaggcag
     2701 ggatgatctt ggacttcttt tttttttttt ttcggagctg gggaccgaac ccagggcctt
     2761 gcgcttccta ggtaagcgct ctaccactga gctaaatccc cagccccgat cttggacttc
     2821 taaccatctt gcctcaactt cccaggtact ctgattacag gaacggatca tcacacctag
     2881 tttcagctgt gcttgaaacc tagccaagag ctttgtgcgt gttaggcacc aactggctgc
     2941 attctcacct gtgtttggtg gggttttaaa tttaatttta ttattttatg tatatgaatg
     3001 tttgcctgca cactgttatg tatttgcaca tgtgtgcctg gtgaccaagg aggtcagaag
     3061 agggggtcag atatccctgt gcctggagtt acagacggtt ttgagttgcc atgtgggtgc
     3121 tgggaattga atttgtgtct ggaaaagcac tgagcattct ctccagcccc tttgtgttag
     3181 aaatgggatc tcactacata gcccaagcta gcctcccaag ggctaggatt acagatgtac
     3241 aacagcacta catgtgactt taatgaggaa taaaaggaaa aaaatgtttt tttttctttt
     3301 tttcggagct ggggaccaaa cccagggcct tgcgcttact aggcaagcgc tctaccactg
     3361 agctaaatcc ccaacccaaa atgttttttc ct
//
